==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER NUCLEAR PROTEIN 17-NOV-09 3KQI . COMPND 2 MOLECULE: PHD FINGER PROTEIN 2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR H.WEN,J.Z.LI,T.SONG,M.LU,M.LEE . 77 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5758.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 37 48.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 12 15.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 5.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 10.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 9 11.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -1 A G > 0 0 107 0, 0.0 3,-1.8 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-143.7 -14.2 24.0 2.2 2 0 A S T 3 + 0 0 119 1,-0.3 0, 0.0 0, 0.0 0, 0.0 0.725 360.0 56.3 -62.6 -22.8 -17.0 24.1 -0.3 3 1 A M T 3 S+ 0 0 173 2,-0.0 -1,-0.3 0, 0.0 0, 0.0 0.305 79.5 125.2 -93.9 9.0 -19.4 25.6 2.3 4 2 A A < - 0 0 72 -3,-1.8 2,-0.2 1,-0.1 0, 0.0 -0.284 62.5-116.9 -63.1 150.7 -17.2 28.7 3.0 5 3 A T - 0 0 143 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.495 24.2-152.7 -82.6 162.5 -18.7 32.1 2.6 6 4 A V - 0 0 92 -2,-0.2 2,-0.0 9,-0.0 0, 0.0 -0.996 21.7-108.8-135.4 136.9 -17.3 34.6 0.0 7 5 A P - 0 0 79 0, 0.0 9,-0.5 0, 0.0 2,-0.3 -0.376 33.7-159.7 -60.3 145.6 -17.4 38.4 0.1 8 6 A V E -A 15 0A 57 7,-0.2 2,-0.2 -2,-0.0 23,-0.1 -0.904 11.4-179.4-128.3 158.0 -19.8 40.1 -2.3 9 7 A Y E >> +A 14 0A 42 5,-2.4 5,-1.2 -2,-0.3 4,-0.9 -0.806 30.0 31.5-143.6 172.9 -19.8 43.7 -3.5 10 8 A C T 45S- 0 0 2 21,-1.5 3,-0.4 -2,-0.2 22,-0.1 0.183 94.1 -61.7 72.8 179.3 -21.5 46.3 -5.7 11 9 A V T 45S+ 0 0 74 1,-0.2 -1,-0.2 22,-0.1 21,-0.1 0.776 135.0 57.4 -69.4 -25.5 -25.1 46.9 -6.7 12 10 A C T 45S- 0 0 50 2,-0.1 -1,-0.2 21,-0.0 -2,-0.2 0.639 101.4-135.2 -82.1 -12.7 -25.1 43.5 -8.4 13 11 A R T <5 + 0 0 128 -4,-0.9 -3,-0.2 -3,-0.4 -2,-0.1 0.919 50.2 149.4 55.1 50.0 -24.0 41.6 -5.2 14 12 A L E < -A 9 0A 76 -5,-1.2 -5,-2.4 1,-0.1 -1,-0.2 -0.805 50.0-108.0-105.9 154.9 -21.4 39.5 -6.9 15 13 A P E -A 8 0A 57 0, 0.0 -7,-0.2 0, 0.0 -1,-0.1 -0.294 58.5 -70.5 -69.8 165.7 -18.2 38.1 -5.5 16 14 A Y - 0 0 86 -9,-0.5 2,-0.4 1,-0.0 3,-0.0 -0.305 43.8-167.6 -66.5 139.6 -14.9 39.6 -6.7 17 15 A D > - 0 0 59 3,-0.2 3,-2.0 -3,-0.1 -1,-0.0 -0.977 12.5-153.5-127.2 110.6 -13.8 39.0 -10.3 18 16 A V T 3 S+ 0 0 99 -2,-0.4 -1,-0.1 1,-0.3 -2,-0.0 0.615 90.9 65.7 -64.6 -11.2 -10.2 40.1 -10.9 19 17 A T T 3 S+ 0 0 102 59,-0.1 2,-0.4 2,-0.1 -1,-0.3 0.491 92.3 74.6 -88.4 -2.4 -11.0 40.7 -14.7 20 18 A R S < S- 0 0 70 -3,-2.0 -3,-0.2 57,-0.1 2,-0.1 -0.939 82.2-121.0-118.9 132.1 -13.4 43.6 -13.9 21 19 A F - 0 0 19 -2,-0.4 13,-1.6 54,-0.0 14,-0.3 -0.389 33.2-172.9 -64.9 139.4 -12.5 47.1 -12.8 22 20 A M E -BC 33 76B 0 54,-1.9 54,-2.7 11,-0.2 2,-0.4 -0.983 13.7-158.7-136.8 152.5 -13.9 48.3 -9.5 23 21 A I E -BC 32 75B 0 9,-2.4 9,-2.3 -2,-0.3 2,-0.4 -0.977 20.1-126.3-129.9 140.4 -14.0 51.6 -7.5 24 22 A E E -B 31 0B 15 50,-2.7 2,-0.6 -2,-0.4 50,-0.3 -0.713 16.1-131.4 -88.8 132.5 -14.6 52.1 -3.8 25 23 A C > - 0 0 0 5,-2.6 4,-1.7 -2,-0.4 26,-0.2 -0.736 12.8-147.5 -76.3 123.7 -17.3 54.4 -2.5 26 24 A D T 4 S+ 0 0 74 24,-2.9 25,-0.1 -2,-0.6 -1,-0.1 0.729 92.1 47.0 -66.0 -21.1 -15.7 56.6 0.1 27 25 A A T 4 S+ 0 0 34 23,-0.5 -1,-0.2 1,-0.1 24,-0.1 0.965 125.0 20.6 -85.5 -63.9 -18.9 56.7 2.1 28 26 A C T 4 S- 0 0 66 2,-0.1 -2,-0.2 1,-0.0 3,-0.1 0.597 92.2-135.7 -85.5 -12.7 -20.3 53.2 2.4 29 27 A K < + 0 0 110 -4,-1.7 2,-0.1 1,-0.2 -3,-0.1 0.559 59.2 132.8 67.6 11.1 -16.9 51.5 1.7 30 28 A D - 0 0 37 -5,-0.1 -5,-2.6 -21,-0.1 2,-0.3 -0.428 55.1-120.9 -81.1 167.2 -18.5 49.0 -0.7 31 29 A W E -B 24 0B 23 -7,-0.2 -21,-1.5 -2,-0.1 2,-0.4 -0.889 23.4-157.7-115.7 147.1 -16.9 48.4 -4.1 32 30 A F E -B 23 0B 7 -9,-2.3 -9,-2.4 -2,-0.3 2,-0.3 -0.973 20.1-121.7-133.4 131.4 -18.5 48.9 -7.5 33 31 A H E >> -B 22 0B 1 -2,-0.4 4,-1.4 -11,-0.2 3,-1.0 -0.548 24.8-133.8 -64.7 131.0 -18.0 47.5 -11.0 34 32 A G H 3>>S+ 0 0 3 -13,-1.6 5,-2.3 -2,-0.3 4,-1.1 0.893 108.6 54.8 -52.0 -39.8 -17.3 50.5 -13.3 35 33 A S H 345S+ 0 0 96 -14,-0.3 -1,-0.3 1,-0.2 5,-0.1 0.759 106.7 50.8 -67.8 -24.7 -19.8 48.9 -15.7 36 34 A C H <45S+ 0 0 50 -3,-1.0 -1,-0.2 1,-0.1 -2,-0.2 0.725 121.8 30.2 -82.4 -25.2 -22.5 48.7 -13.0 37 35 A V H <5S- 0 0 26 -4,-1.4 -2,-0.2 -3,-0.4 -1,-0.1 0.303 112.2-104.5-120.5 7.0 -22.2 52.4 -11.9 38 36 A G T <5S+ 0 0 63 -4,-1.1 2,-0.5 1,-0.2 -3,-0.2 0.857 73.2 134.2 73.2 38.1 -21.1 54.1 -15.2 39 37 A V < - 0 0 13 -5,-2.3 2,-0.3 -6,-0.2 -1,-0.2 -0.981 45.8-143.6-120.5 123.5 -17.5 54.7 -14.4 40 38 A E >> - 0 0 136 -2,-0.5 3,-1.4 1,-0.1 4,-1.3 -0.636 18.0-127.1 -84.3 142.2 -14.8 53.9 -17.0 41 39 A E T 34 S+ 0 0 46 -2,-0.3 3,-0.4 1,-0.3 -1,-0.1 0.892 111.4 52.6 -53.7 -41.3 -11.5 52.5 -15.8 42 40 A E T 34 S+ 0 0 155 1,-0.2 -1,-0.3 2,-0.2 4,-0.1 0.646 108.6 49.8 -72.3 -16.2 -9.6 55.2 -17.7 43 41 A E T X4 S+ 0 0 79 -3,-1.4 3,-1.6 1,-0.1 4,-0.4 0.688 90.8 80.9 -91.3 -21.7 -11.7 58.0 -16.1 44 42 A A G >< S+ 0 0 3 -4,-1.3 3,-2.0 -3,-0.4 -2,-0.2 0.812 76.8 67.3 -60.6 -36.1 -11.2 56.8 -12.5 45 43 A P G 3 S+ 0 0 51 0, 0.0 -1,-0.3 0, 0.0 -2,-0.1 0.750 99.8 54.6 -56.5 -23.2 -7.8 58.3 -12.0 46 44 A D G < S+ 0 0 69 -3,-1.6 19,-2.8 -4,-0.1 2,-0.5 0.597 87.0 97.1 -83.6 -12.1 -9.4 61.7 -12.2 47 45 A I B < +D 64 0C 8 -3,-2.0 17,-0.3 -4,-0.4 3,-0.2 -0.652 45.8 178.0 -80.9 126.1 -12.0 60.9 -9.4 48 46 A D S S+ 0 0 80 15,-2.4 2,-0.7 -2,-0.5 -1,-0.2 0.895 74.8 17.1 -85.3 -80.3 -11.0 62.2 -6.0 49 47 A I S S- 0 0 64 24,-0.1 14,-2.2 12,-0.1 2,-0.5 -0.869 77.9-157.4 -98.1 114.0 -13.9 61.3 -3.7 50 48 A Y - 0 0 10 -2,-0.7 -24,-2.9 -26,-0.3 -23,-0.5 -0.789 10.2-175.5 -90.8 127.6 -16.1 58.6 -5.3 51 49 A H - 0 0 22 -2,-0.5 11,-0.3 -26,-0.2 -26,-0.1 -0.995 22.9-128.8-119.1 128.8 -19.7 58.2 -4.1 52 50 A C > - 0 0 2 -2,-0.4 4,-2.4 1,-0.1 -15,-0.0 -0.218 34.8 -96.7 -66.3 162.2 -21.9 55.4 -5.4 53 51 A P H > S+ 0 0 48 0, 0.0 4,-0.7 0, 0.0 -1,-0.1 0.840 125.9 47.9 -51.5 -37.2 -25.4 56.2 -6.8 54 52 A N H >4 S+ 0 0 102 1,-0.2 3,-0.7 2,-0.2 4,-0.3 0.947 114.0 44.7 -69.2 -47.1 -27.0 55.3 -3.5 55 53 A C H >> S+ 0 0 16 1,-0.2 4,-3.0 2,-0.2 3,-1.1 0.756 98.7 73.0 -69.9 -25.9 -24.6 57.4 -1.3 56 54 A E H 3X S+ 0 0 77 -4,-2.4 4,-1.9 1,-0.2 -1,-0.2 0.883 86.6 66.3 -48.8 -43.6 -24.8 60.4 -3.7 57 55 A K H << S+ 0 0 164 -3,-0.7 -1,-0.2 -4,-0.7 -2,-0.2 0.776 121.1 13.3 -57.7 -32.6 -28.3 61.1 -2.5 58 56 A T H <4 S+ 0 0 118 -3,-1.1 -1,-0.2 -4,-0.3 -2,-0.2 0.657 132.6 43.8-116.7 -22.8 -27.1 62.0 1.1 59 57 A H H < S- 0 0 108 -4,-3.0 -3,-0.2 1,-0.2 -2,-0.2 0.403 107.5-114.1-107.7 -2.3 -23.3 62.5 0.8 60 58 A G < - 0 0 34 -4,-1.9 -1,-0.2 -5,-0.4 -2,-0.1 0.029 42.7 -47.7 91.1 164.5 -23.2 64.5 -2.4 61 59 A K - 0 0 172 1,-0.1 -12,-0.1 -4,-0.1 -9,-0.1 -0.220 67.5 -88.2 -68.5 156.8 -21.8 63.8 -5.9 62 60 A S - 0 0 40 -11,-0.3 2,-0.3 1,-0.1 -12,-0.2 -0.222 45.1-136.1 -56.5 152.9 -18.4 62.4 -6.6 63 61 A T - 0 0 56 -14,-2.2 -15,-2.4 -3,-0.1 2,-0.3 -0.804 6.9-128.2-113.1 160.2 -15.6 65.0 -6.8 64 62 A L B -D 47 0C 120 -2,-0.3 -17,-0.2 -17,-0.3 2,-0.2 -0.803 27.6-104.4-105.9 149.2 -12.7 65.4 -9.3 65 63 A K - 0 0 77 -19,-2.8 3,-0.1 -2,-0.3 -1,-0.0 -0.514 19.6-155.0 -65.8 133.8 -9.0 65.8 -8.5 66 64 A K S S+ 0 0 215 -2,-0.2 2,-0.3 1,-0.1 -1,-0.1 0.564 80.1 30.4 -87.2 -11.4 -7.8 69.4 -9.1 67 65 A K - 0 0 180 -21,-0.1 2,-0.3 2,-0.0 -1,-0.1 -0.979 69.7-159.7-145.2 155.9 -4.2 68.2 -9.6 68 66 A R - 0 0 124 -2,-0.3 2,-0.7 -3,-0.1 -22,-0.1 -0.973 23.4-117.5-138.7 148.4 -2.6 65.0 -11.1 69 67 A T - 0 0 123 -2,-0.3 2,-0.4 2,-0.0 -2,-0.0 -0.788 28.6-159.3 -84.6 116.1 0.8 63.3 -11.0 70 68 A W 0 0 214 -2,-0.7 -2,-0.0 0, 0.0 0, 0.0 -0.796 360.0 360.0 -91.0 141.1 2.3 63.1 -14.4 71 69 A H 0 0 196 -2,-0.4 -2,-0.0 0, 0.0 0, 0.0 0.196 360.0 360.0 86.8 360.0 5.0 60.4 -14.9 72 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 73 1 B A 0 0 42 0, 0.0 2,-0.4 0, 0.0 -24,-0.1 0.000 360.0 360.0 360.0 154.9 -10.5 57.2 -5.2 74 2 B R + 0 0 153 -50,-0.3 -50,-2.7 -24,-0.1 2,-0.3 -0.709 360.0 178.2 -85.5 138.2 -9.4 53.7 -4.4 75 3 B T E -C 23 0B 46 -2,-0.4 2,-0.5 -52,-0.2 -52,-0.2 -0.912 33.8-134.3-138.4 162.6 -9.7 51.2 -7.3 76 4 B X E -C 22 0B 64 -54,-2.7 -54,-1.9 -2,-0.3 2,-0.0 -0.979 33.9-148.6-118.9 110.5 -9.1 47.6 -8.3 77 5 B Q 0 0 120 -2,-0.5 -57,-0.1 -56,-0.2 -54,-0.0 -0.262 360.0 360.0 -73.7 162.5 -7.3 47.6 -11.7 78 6 B T 0 0 100 -59,-0.1 -59,-0.1 -2,-0.0 -1,-0.1 -0.833 360.0 360.0-102.9 360.0 -7.6 45.0 -14.4