==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-JAN-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 21-DEC-09 2KRM . COMPND 2 MOLECULE: CD2-ASSOCIATED PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR J.A.J.ORTEGA ROLDAN,A.I.AZUAGA,N.A.J.VAN NULAND . 57 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4128.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 40 70.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 3.5 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 19 33.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 17.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 8.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A V 0 0 71 0, 0.0 27,-2.3 0, 0.0 2,-0.1 0.000 360.0 360.0 360.0 146.6 65.5 22.8 29.4 2 3 A D - 0 0 64 54,-0.3 54,-3.1 25,-0.2 2,-0.3 -0.437 360.0-156.2 -83.6 157.5 64.8 19.0 29.5 3 4 A Y E -AB 25 55A 27 22,-1.4 22,-2.8 52,-0.3 2,-0.4 -0.959 8.3-139.5-134.2 151.9 62.3 17.2 27.2 4 5 A I E -AB 24 54A 49 50,-2.7 50,-3.3 -2,-0.3 2,-0.4 -0.937 24.5-120.8-113.8 134.0 60.3 14.0 27.4 5 6 A V E + B 0 53A 0 18,-3.3 17,-3.5 -2,-0.4 48,-0.3 -0.586 34.5 167.6 -76.7 123.6 59.9 11.8 24.4 6 7 A E + 0 0 82 46,-3.8 2,-0.4 -2,-0.4 47,-0.2 0.609 67.5 40.3-106.5 -21.2 56.2 11.3 23.5 7 8 A Y S S- 0 0 143 45,-1.7 2,-0.3 13,-0.1 -1,-0.2 -0.988 85.7-112.9-132.9 141.3 56.7 9.7 20.1 8 9 A D - 0 0 80 -2,-0.4 2,-0.4 12,-0.1 12,-0.2 -0.555 34.4-172.5 -74.8 129.3 59.2 7.1 18.9 9 10 A Y - 0 0 30 10,-3.3 2,-0.6 -2,-0.3 -4,-0.0 -0.986 15.9-144.3-127.1 132.9 61.7 8.5 16.3 10 11 A D - 0 0 112 -2,-0.4 2,-0.6 8,-0.2 8,-0.1 -0.858 22.6-125.7-100.0 116.7 64.3 6.6 14.3 11 12 A A + 0 0 29 -2,-0.6 7,-0.1 1,-0.2 37,-0.1 -0.453 29.3 178.4 -62.8 107.3 67.5 8.4 13.7 12 13 A V + 0 0 123 -2,-0.6 -1,-0.2 5,-0.1 2,-0.1 0.870 67.9 43.7 -77.7 -39.4 68.0 8.3 9.9 13 14 A H S S- 0 0 124 -3,-0.1 3,-0.4 1,-0.1 0, 0.0 -0.395 90.0-112.0 -98.3 178.2 71.2 10.3 10.1 14 15 A D S S+ 0 0 149 1,-0.2 -1,-0.1 -2,-0.1 -3,-0.1 0.763 118.1 50.0 -81.7 -27.1 74.2 10.0 12.4 15 16 A D S S+ 0 0 72 31,-0.1 32,-2.2 2,-0.1 2,-0.4 0.332 92.0 101.8 -92.1 5.9 73.5 13.4 14.0 16 17 A E B S-c 47 0B 9 -3,-0.4 2,-0.5 30,-0.2 32,-0.2 -0.768 71.2-131.9 -94.4 135.3 69.9 12.4 14.6 17 18 A L - 0 0 0 30,-2.8 2,-1.6 -2,-0.4 -5,-0.1 -0.750 9.8-137.7 -89.6 125.7 68.8 11.3 18.1 18 19 A T - 0 0 49 -2,-0.5 2,-0.3 23,-0.1 -8,-0.2 -0.630 30.8-171.5 -83.1 86.2 66.8 8.1 18.3 19 20 A I - 0 0 0 -2,-1.6 -10,-3.3 -12,-0.1 2,-0.4 -0.629 6.5-160.9 -84.7 136.8 64.2 9.2 20.8 20 21 A R > - 0 0 116 -2,-0.3 3,-2.6 -12,-0.2 -15,-0.3 -0.953 34.9 -89.7-119.8 137.8 61.8 6.6 22.3 21 22 A V T 3 S+ 0 0 91 -2,-0.4 -15,-0.2 1,-0.3 3,-0.1 -0.146 114.8 24.9 -45.7 122.5 58.5 7.4 24.0 22 23 A G T 3 S+ 0 0 51 -17,-3.5 -1,-0.3 1,-0.4 2,-0.1 0.142 92.3 123.3 107.1 -18.2 59.2 7.8 27.7 23 24 A E < - 0 0 44 -3,-2.6 -18,-3.3 -18,-0.1 2,-0.5 -0.416 54.2-136.4 -78.3 152.8 62.8 8.8 27.5 24 25 A I E -A 4 0A 88 -20,-0.2 2,-0.5 -2,-0.1 -20,-0.2 -0.944 11.5-147.7-112.4 125.2 64.2 12.1 28.9 25 26 A I E -A 3 0A 0 -22,-2.8 -22,-1.4 -2,-0.5 3,-0.5 -0.812 17.2-128.2 -97.0 125.0 66.6 14.2 26.9 26 27 A R E S-D 40 0B 147 14,-2.7 14,-3.4 -2,-0.5 -24,-0.1 -0.559 82.2 -7.1 -75.6 125.9 69.3 16.1 28.8 27 28 A N E S- 0 0 91 -2,-0.4 2,-0.8 12,-0.2 -1,-0.2 0.978 76.7-165.1 54.4 68.7 69.5 19.9 27.9 28 29 A V E + 0 0 2 -27,-2.3 11,-0.3 -3,-0.5 2,-0.2 -0.765 13.8 176.1 -88.4 107.9 67.1 20.0 24.9 29 30 A K E -D 38 0B 125 9,-3.0 9,-2.8 -2,-0.8 2,-0.4 -0.671 32.9-102.5-108.4 164.6 67.6 23.3 23.1 30 31 A K E -D 37 0B 166 -2,-0.2 7,-0.2 7,-0.2 2,-0.1 -0.732 35.5-155.4 -90.6 133.5 66.1 24.6 19.9 31 32 A L - 0 0 52 5,-1.7 5,-0.1 -2,-0.4 4,-0.1 -0.301 33.9 -99.2 -96.2-177.8 68.2 24.5 16.7 32 33 A Q S S+ 0 0 206 -2,-0.1 2,-0.6 2,-0.1 5,-0.1 0.447 101.1 89.2 -81.8 -0.2 68.1 26.6 13.5 33 34 A E S > S- 0 0 89 3,-0.3 3,-2.0 1,-0.0 -2,-0.3 -0.888 86.1-122.5-103.4 115.9 66.1 23.8 11.9 34 35 A E T 3 S+ 0 0 198 -2,-0.6 3,-0.1 1,-0.3 -2,-0.1 -0.371 99.8 17.9 -58.1 118.5 62.3 24.1 12.3 35 36 A G T 3 S+ 0 0 30 1,-0.2 15,-1.0 -2,-0.2 2,-0.4 0.610 106.0 104.1 93.8 14.1 61.2 20.9 14.0 36 37 A W E < - E 0 49B 70 -3,-2.0 -5,-1.7 13,-0.3 -3,-0.3 -0.996 44.6-175.9-133.8 132.7 64.6 19.9 15.2 37 38 A L E -DE 30 48B 1 11,-2.4 11,-1.3 -2,-0.4 2,-0.5 -0.753 19.3-131.7-120.1 166.6 66.0 20.1 18.8 38 39 A E E +DE 29 47B 46 -9,-2.8 -9,-3.0 -2,-0.3 2,-0.3 -0.974 39.8 139.1-126.0 120.6 69.4 19.4 20.3 39 40 A G E - E 0 46B 2 7,-2.0 7,-2.4 -2,-0.5 2,-0.9 -0.983 52.9-103.1-155.2 163.4 69.8 17.3 23.4 40 41 A E E +DE 26 45B 54 -14,-3.4 -14,-2.7 -2,-0.3 2,-0.4 -0.807 50.5 157.2 -95.0 103.8 71.9 14.6 25.2 41 42 A L E > + E 0 44B 7 3,-2.6 3,-1.3 -2,-0.9 -23,-0.1 -0.982 62.6 7.3-129.8 140.7 70.0 11.3 25.0 42 43 A N T 3 S- 0 0 78 -2,-0.4 -1,-0.1 1,-0.3 3,-0.1 0.682 132.8 -59.2 65.0 18.3 71.3 7.7 25.3 43 44 A G T 3 S+ 0 0 69 1,-0.3 2,-0.3 -3,-0.0 -1,-0.3 0.629 121.2 92.7 86.2 14.4 74.7 9.2 26.2 44 45 A R E < S- E 0 41B 81 -3,-1.3 -3,-2.6 -5,-0.1 2,-0.7 -0.989 73.9-123.5-140.9 149.3 74.9 11.2 22.9 45 46 A R E + E 0 40B 206 -2,-0.3 -5,-0.2 -5,-0.3 2,-0.2 -0.827 50.3 146.3 -94.8 115.3 74.1 14.7 21.7 46 47 A G E - E 0 39B 1 -7,-2.4 -7,-2.0 -2,-0.7 2,-0.4 -0.770 46.9 -97.3-138.9-176.5 71.8 14.5 18.7 47 48 A M E +cE 16 38B 36 -32,-2.2 -30,-2.8 -2,-0.2 -9,-0.2 -0.911 38.2 175.4-111.6 133.8 68.9 16.1 16.9 48 49 A F E - E 0 37B 0 -11,-1.3 -11,-2.4 -2,-0.4 -30,-0.1 -0.936 38.6 -81.7-136.5 156.9 65.3 15.0 17.3 49 50 A P E >> - E 0 36B 11 0, 0.0 3,-1.0 0, 0.0 4,-0.7 -0.284 29.5-141.9 -59.0 136.6 61.8 16.1 16.1 50 51 A D G >4 S+ 0 0 50 -15,-1.0 3,-0.6 1,-0.2 -14,-0.1 0.863 101.2 54.6 -67.8 -38.2 60.2 18.9 18.1 51 52 A N G 34 S+ 0 0 133 1,-0.2 -1,-0.2 -16,-0.2 3,-0.1 0.388 104.2 57.9 -78.3 4.7 56.7 17.4 17.9 52 53 A F G <4 S+ 0 0 66 -3,-1.0 -46,-3.8 1,-0.1 -45,-1.7 0.638 103.3 54.2-105.3 -22.3 58.1 14.1 19.4 53 54 A V E << -B 5 0A 5 -4,-0.7 2,-0.5 -3,-0.6 -48,-0.3 -0.924 69.3-150.4-117.4 141.1 59.4 15.5 22.6 54 55 A K E -B 4 0A 134 -50,-3.3 -50,-2.7 -2,-0.4 -3,-0.1 -0.942 27.3-111.6-113.6 125.2 57.6 17.6 25.2 55 56 A E E -B 3 0A 68 -2,-0.5 2,-1.2 -52,-0.2 -52,-0.3 -0.169 31.1-115.8 -51.7 141.5 59.4 20.2 27.3 56 57 A I 0 0 72 -54,-3.1 -54,-0.3 1,-0.2 -1,-0.1 -0.685 360.0 360.0 -86.0 93.3 59.6 19.3 31.0 57 58 A K 0 0 229 -2,-1.2 -1,-0.2 -56,-0.1 -55,-0.1 0.925 360.0 360.0 -91.2 360.0 57.6 22.0 32.7