==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-JAN-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 21-DEC-09 2KRN . COMPND 2 MOLECULE: CD2-ASSOCIATED PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR J.ORTEGA ROLDAN,A.I.AZUAGA,N.A.J.VAN NULAND . 60 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4250.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 45 75.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 3.3 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 23 38.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 13 21.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 108 0, 0.0 32,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 47.5 13.3 -10.6 0.6 2 2 A S - 0 0 75 32,-0.0 3,-0.1 3,-0.0 31,-0.1 0.514 360.0-124.1-100.7 -6.2 13.5 -7.4 -1.4 3 3 A M - 0 0 180 1,-0.2 30,-0.1 29,-0.1 29,-0.0 0.852 45.1-159.9 60.9 38.8 14.6 -5.3 1.6 4 4 A G - 0 0 33 28,-0.3 2,-0.3 1,-0.1 -1,-0.2 -0.086 8.5-141.4 -58.0 141.4 11.6 -3.2 0.8 5 5 A R - 0 0 107 -3,-0.1 2,-0.1 1,-0.1 -1,-0.1 -0.662 29.9 -87.1-102.5 159.3 11.3 0.3 1.9 6 6 A Q - 0 0 55 -2,-0.3 54,-0.8 24,-0.1 2,-0.5 -0.369 39.4-140.9 -68.7 141.3 8.2 2.0 3.1 7 7 A C E -A 29 0A 0 22,-1.8 22,-3.2 51,-0.2 2,-0.3 -0.890 7.1-141.9-110.0 131.3 6.1 3.7 0.5 8 8 A K E -AB 28 57A 78 49,-1.7 49,-1.7 -2,-0.5 2,-0.7 -0.665 23.1-115.2 -91.7 148.2 4.4 7.0 1.1 9 9 A V E + B 0 56A 1 18,-3.2 17,-2.5 -2,-0.3 47,-0.2 -0.748 42.1 162.5 -88.2 114.5 1.0 7.6 -0.2 10 10 A L + 0 0 66 45,-2.4 2,-0.3 -2,-0.7 46,-0.2 0.769 59.1 41.9-101.0 -34.3 1.1 10.2 -2.9 11 11 A F S S- 0 0 108 44,-2.0 2,-0.3 13,-0.1 -1,-0.1 -0.782 85.8 -99.4-121.8 160.7 -2.2 9.7 -4.7 12 12 A D - 0 0 124 -2,-0.3 2,-0.5 13,-0.1 12,-0.1 -0.583 33.6-173.6 -81.7 131.2 -5.8 9.0 -3.6 13 13 A Y B -C 23 0B 30 10,-1.1 10,-0.9 -2,-0.3 -1,-0.0 -0.950 12.0-167.6-131.5 113.0 -7.1 5.5 -3.8 14 14 A S - 0 0 105 -2,-0.5 8,-0.1 8,-0.1 7,-0.1 -0.894 32.8-128.7 -94.1 106.7 -10.6 4.7 -3.2 15 15 A P - 0 0 38 0, 0.0 3,-0.1 0, 0.0 7,-0.1 -0.208 13.4-152.0 -64.0 149.9 -10.6 0.9 -2.9 16 16 A Q S S+ 0 0 147 1,-0.2 2,-0.3 2,-0.0 -2,-0.0 0.718 89.2 26.9 -88.4 -30.0 -12.9 -1.3 -4.9 17 17 A N S > S- 0 0 87 4,-0.0 3,-1.1 1,-0.0 -1,-0.2 -0.915 80.3-123.8-130.0 156.6 -12.7 -3.9 -2.1 18 18 A E T 3 S+ 0 0 164 -2,-0.3 4,-0.2 1,-0.3 -1,-0.0 0.561 109.7 71.7 -80.9 -7.4 -12.0 -3.5 1.5 19 19 A D T 3 S+ 0 0 108 30,-0.1 31,-2.9 2,-0.1 2,-0.5 0.688 83.1 84.6 -73.7 -21.7 -9.2 -5.9 1.1 20 20 A E B < S-d 50 0C 9 -3,-1.1 31,-0.2 29,-0.2 2,-0.2 -0.739 93.9-117.4 -84.2 126.0 -7.6 -3.1 -0.7 21 21 A L - 0 0 4 29,-2.7 2,-0.6 -2,-0.5 -2,-0.1 -0.452 26.3-112.1 -71.3 132.1 -5.9 -0.8 1.8 22 22 A E - 0 0 131 -2,-0.2 2,-0.9 -4,-0.2 -8,-0.1 -0.554 28.1-143.8 -69.2 114.3 -7.2 2.7 2.0 23 23 A L B -C 13 0B 10 -10,-0.9 -10,-1.1 -2,-0.6 2,-0.6 -0.724 13.6-164.9 -87.0 104.8 -4.6 4.9 0.7 24 24 A I > - 0 0 101 -2,-0.9 3,-1.7 -12,-0.1 -15,-0.3 -0.849 27.2-116.4 -93.7 120.5 -4.6 8.1 2.7 25 25 A V T 3 S+ 0 0 67 -2,-0.6 -15,-0.2 1,-0.2 3,-0.1 -0.349 95.9 20.9 -63.9 121.0 -2.6 10.8 1.0 26 26 A G T 3 S+ 0 0 38 -17,-2.5 -1,-0.2 1,-0.5 -16,-0.1 -0.059 99.2 102.5 115.0 -28.6 0.3 11.9 3.0 27 27 A D < - 0 0 65 -3,-1.7 -18,-3.2 -19,-0.1 -1,-0.5 -0.211 65.7-123.4 -85.3 175.6 0.7 8.9 5.2 28 28 A V E -A 8 0A 42 -20,-0.3 2,-0.5 -3,-0.1 -20,-0.3 -0.951 13.9-146.9-124.1 137.7 3.3 6.1 4.9 29 29 A I E -A 7 0A 0 -22,-3.2 -22,-1.8 -2,-0.4 2,-0.9 -0.904 11.0-138.1-109.3 130.7 2.6 2.5 4.6 30 30 A D E -E 43 0C 77 13,-1.4 13,-2.0 -2,-0.5 2,-0.3 -0.784 26.6-158.7 -86.1 107.3 4.9 -0.1 6.0 31 31 A V E -E 42 0C 13 -2,-0.9 11,-0.3 11,-0.3 3,-0.1 -0.641 17.0-163.6 -89.8 144.3 5.1 -2.8 3.3 32 32 A I E - 0 0 115 9,-3.1 -28,-0.3 1,-0.5 2,-0.3 0.901 68.3 -41.9 -86.4 -59.6 6.1 -6.3 4.1 33 33 A E E -E 41 0C 48 8,-0.9 8,-1.6 -32,-0.1 -1,-0.5 -0.952 60.1-100.4-164.2 157.7 6.9 -7.5 0.6 34 34 A E E -E 40 0C 89 -2,-0.3 6,-0.2 6,-0.2 3,-0.1 -0.761 31.5-178.8 -90.5 139.6 5.3 -7.1 -2.8 35 35 A V E S+ 0 0 88 4,-1.5 5,-0.2 -2,-0.4 2,-0.2 0.825 74.0 14.2-106.5 -44.2 3.3 -10.1 -4.0 36 36 A E E > S-E 39 0C 147 3,-2.3 3,-2.3 1,-0.1 2,-1.4 -0.556 96.3-105.6-138.5 70.0 1.9 -9.3 -7.4 37 37 A E T 3 S+ 0 0 165 1,-0.3 16,-0.2 -2,-0.2 -1,-0.1 -0.183 116.8 31.2 52.3 -79.0 3.8 -6.3 -8.9 38 38 A G T 3 S+ 0 0 23 -2,-1.4 15,-2.6 14,-0.1 2,-0.7 0.910 112.8 69.8 -71.5 -42.8 1.0 -3.7 -8.6 39 39 A W E < +EF 36 52C 82 -3,-2.3 -3,-2.3 13,-0.2 -4,-1.5 -0.684 65.1 178.7 -89.3 111.9 -0.4 -5.3 -5.5 40 40 A W E -EF 34 51C 21 11,-3.2 11,-2.0 -2,-0.7 2,-0.5 -0.639 22.1-131.4-101.2 164.3 1.8 -4.9 -2.4 41 41 A S E +EF 33 50C 23 -8,-1.6 -9,-3.1 -2,-0.2 -8,-0.9 -0.977 45.8 122.1-124.8 120.6 1.0 -6.1 1.0 42 42 A G E -EF 31 49C 0 7,-1.9 7,-2.5 -2,-0.5 2,-0.4 -0.941 48.2-109.8-160.8 178.3 1.4 -3.8 4.0 43 43 A T E -EF 30 48C 48 -13,-2.0 -13,-1.4 -2,-0.3 2,-0.7 -0.964 7.7-154.9-129.1 138.7 -0.4 -2.4 6.9 44 44 A L E > S- F 0 47C 14 3,-2.7 3,-2.1 -2,-0.4 2,-1.9 -0.943 72.1 -56.8-111.0 101.0 -1.4 1.1 7.7 45 45 A N T 3 S- 0 0 130 -2,-0.7 3,-0.1 1,-0.3 -2,-0.0 -0.400 126.2 -10.6 68.4 -78.9 -1.7 1.5 11.4 46 46 A N T 3 S+ 0 0 161 -2,-1.9 2,-0.5 1,-0.1 -1,-0.3 0.421 118.0 83.6-131.1 -6.8 -4.2 -1.3 12.2 47 47 A K E < - F 0 44C 117 -3,-2.1 -3,-2.7 -25,-0.1 2,-0.4 -0.916 57.3-161.2-107.0 125.5 -5.5 -2.4 8.8 48 48 A L E + F 0 43C 107 -2,-0.5 2,-0.3 -5,-0.3 -5,-0.2 -0.844 31.9 134.9 -97.2 136.5 -3.5 -4.8 6.7 49 49 A G E - F 0 42C 10 -7,-2.5 -7,-1.9 -2,-0.4 2,-0.4 -0.976 53.1 -82.9-167.3-179.1 -4.3 -4.9 3.1 50 50 A L E -dF 20 41C 69 -31,-2.9 -29,-2.7 -2,-0.3 -9,-0.2 -0.804 41.7-178.0 -99.2 137.7 -3.4 -5.0 -0.5 51 51 A F E - F 0 40C 0 -11,-2.0 -11,-3.2 -2,-0.4 2,-0.4 -0.999 28.1-115.1-141.6 141.5 -2.5 -1.8 -2.2 52 52 A P E >> - F 0 39C 15 0, 0.0 3,-1.3 0, 0.0 4,-0.6 -0.651 18.2-138.3 -78.7 128.9 -1.5 -0.8 -5.8 53 53 A S T 34 S+ 0 0 35 -15,-2.6 5,-0.1 -2,-0.4 -14,-0.1 0.138 91.5 81.3 -72.8 21.6 2.1 0.6 -6.2 54 54 A N T 34 S+ 0 0 101 -2,-0.2 -1,-0.2 -16,-0.2 -16,-0.0 0.853 97.3 36.3 -90.5 -42.7 0.8 3.2 -8.5 55 55 A F T <4 S+ 0 0 49 -3,-1.3 -45,-2.4 -45,-0.1 -44,-2.0 0.568 118.8 57.3 -90.3 -12.0 -0.5 5.6 -5.9 56 56 A V E < -B 9 0A 2 -4,-0.6 2,-0.4 -47,-0.2 -47,-0.2 -0.942 68.2-161.0-121.6 140.1 2.4 4.8 -3.6 57 57 A K E -B 8 0A 87 -49,-1.7 2,-1.7 -2,-0.4 -49,-1.7 -0.969 24.5-132.7-121.4 141.7 6.1 5.2 -4.2 58 58 A E + 0 0 103 -2,-0.4 -51,-0.2 -51,-0.2 -52,-0.1 -0.673 61.4 133.3 -84.0 76.9 9.0 3.6 -2.5 59 59 A L 0 0 105 -2,-1.7 -1,-0.2 -53,-0.3 -52,-0.1 0.320 360.0 360.0-114.5 7.5 10.8 7.0 -2.4 60 60 A E 0 0 125 -54,-0.8 -53,-0.1 -3,-0.2 -2,-0.1 0.641 360.0 360.0-116.1 360.0 11.8 6.9 1.2