==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=23-JUL-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSFERASE 24-DEC-09 2KS1 . COMPND 2 MOLECULE: RECEPTOR TYROSINE-PROTEIN KINASE ERBB-2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR K.S.MINEEV,E.V.BOCHAROV,Y.E.PUSTOVALOVA,O.V.BOCHAROVA,V.V.CH . 88 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8978.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 64.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 46 52.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 41 A G 0 0 134 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 157.8 2.1 0.0 -1.2 2 42 A C - 0 0 126 1,-0.1 2,-0.1 0, 0.0 0, 0.0 -0.447 360.0 -89.6 -85.9 160.5 1.0 1.0 -4.8 3 43 A P - 0 0 91 0, 0.0 -1,-0.1 0, 0.0 52,-0.0 -0.385 48.6 -99.6 -69.7 144.4 -0.3 -1.4 -7.4 4 44 A A - 0 0 72 1,-0.1 0, 0.0 -2,-0.1 0, 0.0 0.032 48.7 -85.3 -55.4 170.2 2.1 -3.2 -9.8 5 45 A E - 0 0 189 1,-0.0 2,-0.3 2,-0.0 -1,-0.1 -0.066 46.8-171.0 -71.4 177.9 2.7 -1.9 -13.3 6 46 A Q - 0 0 105 1,-0.0 -1,-0.0 51,-0.0 51,-0.0 -0.938 27.5-172.5-159.2 177.9 0.6 -2.8 -16.3 7 47 A R + 0 0 241 -2,-0.3 2,-0.3 0, 0.0 -2,-0.0 0.078 64.5 59.7-174.0 38.9 0.3 -2.5 -20.1 8 48 A A + 0 0 73 1,-0.2 4,-0.1 49,-0.1 49,-0.0 -0.881 53.4 77.1-156.0-174.4 -3.2 -3.8 -21.1 9 49 A S > - 0 0 46 -2,-0.3 3,-1.4 1,-0.1 4,-0.5 1.000 43.1-173.3 62.3 72.6 -6.9 -3.3 -20.8 10 50 A P T 3> S+ 0 0 110 0, 0.0 4,-1.0 0, 0.0 3,-0.3 0.653 77.8 73.2 -69.8 -15.5 -7.5 -0.3 -23.0 11 51 A L H 3> S+ 0 0 113 1,-0.2 4,-1.6 2,-0.2 5,-0.1 0.666 87.9 63.1 -72.9 -16.1 -11.1 -0.2 -21.8 12 52 A T H <> S+ 0 0 6 -3,-1.4 4,-1.8 2,-0.2 -1,-0.2 0.848 98.2 53.2 -76.3 -35.7 -9.9 1.1 -18.5 13 53 A S H > S+ 0 0 88 -4,-0.5 4,-2.0 -3,-0.3 -2,-0.2 0.864 109.0 50.3 -67.4 -36.7 -8.5 4.3 -20.1 14 54 A I H X S+ 0 0 106 -4,-1.0 4,-2.9 2,-0.2 5,-0.2 0.953 109.4 48.7 -66.5 -51.6 -11.8 5.1 -21.7 15 55 A I H X S+ 0 0 69 -4,-1.6 4,-1.8 1,-0.2 -2,-0.2 0.891 110.8 52.6 -55.7 -42.2 -13.9 4.6 -18.5 16 56 A S H X S+ 0 0 4 -4,-1.8 4,-1.8 2,-0.2 -1,-0.2 0.945 111.6 44.6 -59.9 -50.8 -11.5 6.9 -16.6 17 57 A A H X S+ 0 0 36 -4,-2.0 4,-2.3 1,-0.2 5,-0.3 0.933 109.6 55.5 -59.8 -48.4 -11.7 9.7 -19.2 18 58 A V H X S+ 0 0 71 -4,-2.9 4,-2.2 1,-0.3 -1,-0.2 0.860 108.6 49.5 -53.1 -38.1 -15.5 9.4 -19.4 19 59 A V H X S+ 0 0 47 -4,-1.8 4,-2.4 -5,-0.2 -1,-0.3 0.866 107.6 54.2 -70.2 -37.4 -15.6 9.9 -15.6 20 60 A G H X S+ 0 0 8 -4,-1.8 4,-1.9 -3,-0.2 -2,-0.2 0.924 114.2 39.2 -63.1 -46.1 -13.4 12.9 -15.7 21 61 A I H X S+ 0 0 110 -4,-2.3 4,-1.9 2,-0.2 -2,-0.2 0.901 117.5 49.2 -70.9 -42.4 -15.6 14.7 -18.3 22 62 A L H X S+ 0 0 102 -4,-2.2 4,-2.0 -5,-0.3 -2,-0.2 0.851 111.4 51.0 -65.4 -34.9 -18.8 13.6 -16.7 23 63 A L H X S+ 0 0 67 -4,-2.4 4,-3.0 2,-0.2 5,-0.3 0.930 108.7 49.5 -68.4 -46.8 -17.6 14.7 -13.3 24 64 A V H X S+ 0 0 82 -4,-1.9 4,-2.0 1,-0.2 -2,-0.2 0.872 110.8 52.0 -60.3 -38.3 -16.6 18.2 -14.4 25 65 A V H X S+ 0 0 82 -4,-1.9 4,-2.0 2,-0.2 5,-0.2 0.953 114.6 40.1 -63.6 -51.8 -20.0 18.6 -16.0 26 66 A V H X S+ 0 0 85 -4,-2.0 4,-2.7 1,-0.2 5,-0.2 0.960 119.3 45.0 -62.5 -53.6 -21.9 17.6 -12.9 27 67 A L H X S+ 0 0 92 -4,-3.0 4,-3.0 1,-0.2 5,-0.4 0.832 110.5 57.9 -60.3 -32.8 -19.7 19.5 -10.5 28 68 A G H X S+ 0 0 45 -4,-2.0 4,-1.7 -5,-0.3 -1,-0.2 0.935 113.3 35.5 -63.9 -47.9 -19.7 22.4 -12.9 29 69 A V H X S+ 0 0 84 -4,-2.0 4,-1.8 2,-0.2 -2,-0.2 0.826 121.4 49.1 -75.1 -33.0 -23.4 22.9 -12.8 30 70 A V H X S+ 0 0 66 -4,-2.7 4,-1.8 -5,-0.2 -2,-0.2 0.958 115.2 41.1 -70.7 -53.0 -23.7 21.9 -9.2 31 71 A F H X S+ 0 0 122 -4,-3.0 4,-2.0 -5,-0.2 5,-0.3 0.913 115.6 52.1 -62.0 -44.3 -21.0 24.2 -7.9 32 72 A G H X S+ 0 0 30 -4,-1.7 4,-2.5 -5,-0.4 -1,-0.2 0.936 114.1 41.1 -58.5 -49.5 -22.1 27.0 -10.1 33 73 A I H X S+ 0 0 67 -4,-1.8 4,-1.7 1,-0.2 -1,-0.2 0.770 111.3 59.4 -70.1 -26.0 -25.7 26.9 -8.9 34 74 A L H < S+ 0 0 112 -4,-1.8 4,-0.4 2,-0.2 -1,-0.2 0.864 113.8 35.5 -70.2 -36.8 -24.5 26.3 -5.4 35 75 A I H >X S+ 0 0 66 -4,-2.0 4,-1.3 2,-0.2 3,-0.8 0.842 111.5 60.8 -84.5 -37.4 -22.6 29.6 -5.3 36 76 A K H >X S+ 0 0 126 -4,-2.5 4,-1.8 1,-0.3 3,-0.8 0.920 97.6 58.8 -55.3 -47.4 -25.1 31.5 -7.5 37 77 A R H 3< S+ 0 0 136 -4,-1.7 -1,-0.3 1,-0.3 -2,-0.2 0.827 103.9 53.5 -52.2 -33.5 -27.9 30.9 -4.9 38 78 A R H <4 S+ 0 0 209 -3,-0.8 -1,-0.3 -4,-0.4 -2,-0.2 0.843 109.2 49.1 -71.3 -34.5 -25.6 32.7 -2.4 39 79 A Q H << S- 0 0 148 -4,-1.3 2,-0.3 -3,-0.8 -2,-0.2 0.998 125.8 -40.9 -67.7 -68.2 -25.3 35.7 -4.7 40 80 A Q < - 0 0 158 -4,-1.8 2,-0.6 0, 0.0 -1,-0.3 -0.950 64.9 -79.2-155.6 172.0 -28.9 36.4 -5.6 41 81 A K + 0 0 143 -2,-0.3 3,-0.1 1,-0.2 -4,-0.1 -0.707 42.9 162.8 -84.1 118.9 -32.2 34.8 -6.5 42 82 A I + 0 0 131 -2,-0.6 2,-2.0 2,-0.2 -1,-0.2 0.701 62.3 76.1-104.3 -29.3 -32.3 33.7 -10.2 43 83 A R 0 0 156 1,-0.2 -1,-0.1 -6,-0.0 -2,-0.0 -0.376 360.0 360.0 -82.2 60.1 -35.2 31.2 -10.0 44 84 A K 0 0 233 -2,-2.0 -1,-0.2 -3,-0.1 -2,-0.2 0.963 360.0 360.0 57.0 360.0 -37.8 34.0 -9.8 45 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 46 134 B E 0 0 256 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -47.6 -0.9 -23.5 -27.0 47 135 B G + 0 0 56 1,-0.2 0, 0.0 2,-0.0 0, 0.0 -0.985 360.0 102.4 160.7-166.3 -1.1 -22.5 -23.3 48 136 B C - 0 0 117 -2,-0.3 -1,-0.2 1,-0.1 0, 0.0 0.992 37.5-175.1 55.6 72.0 0.4 -20.5 -20.5 49 137 B P - 0 0 116 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.691 27.9-138.6 -69.8 -18.9 -2.1 -17.6 -20.4 50 138 B T - 0 0 120 2,-0.0 -2,-0.0 0, 0.0 -3,-0.0 0.806 48.6 -86.7 63.1 29.7 0.0 -15.9 -17.8 51 139 B N - 0 0 127 2,-0.0 3,-0.1 1,-0.0 0, 0.0 0.045 50.8-172.1 61.8-177.9 -3.2 -15.0 -15.9 52 140 B G + 0 0 51 3,-0.0 2,-1.9 1,-0.0 -2,-0.0 -0.090 60.7 61.3-167.0 -83.7 -5.2 -11.9 -16.7 53 141 B P S S+ 0 0 134 0, 0.0 2,-0.3 0, 0.0 4,-0.1 -0.459 74.7 120.5 -69.7 82.0 -8.2 -10.7 -14.6 54 142 B K - 0 0 144 -2,-1.9 0, 0.0 2,-0.3 0, 0.0 -0.913 65.0 -69.6-151.7 119.9 -6.3 -10.1 -11.3 55 143 B I S S+ 0 0 117 -2,-0.3 2,-0.2 2,-0.1 -51,-0.0 -0.182 113.2 56.3 -51.8 137.2 -5.9 -6.9 -9.3 56 144 B P S S+ 0 0 47 0, 0.0 -2,-0.3 0, 0.0 -51,-0.0 0.540 94.5 83.9 -69.8 157.5 -4.4 -4.6 -10.0 57 145 B S S S+ 0 0 24 -2,-0.2 3,-0.4 -4,-0.1 4,-0.1 -0.166 92.5 25.1-177.3 -75.9 -6.4 -4.4 -13.3 58 146 B I S > S+ 0 0 106 1,-0.2 3,-2.5 2,-0.1 4,-0.5 0.745 105.4 78.1 -82.7 -25.5 -9.8 -2.6 -13.2 59 147 B A T >> S+ 0 0 47 1,-0.3 4,-1.6 2,-0.2 3,-0.7 0.808 77.9 74.9 -52.5 -31.0 -8.8 -0.5 -10.2 60 148 B T H 3> S+ 0 0 44 -3,-0.4 4,-2.9 1,-0.2 -1,-0.3 0.801 83.8 68.6 -53.1 -30.0 -6.8 1.6 -12.7 61 149 B G H <> S+ 0 0 2 -3,-2.5 4,-2.0 2,-0.2 -1,-0.2 0.951 101.2 42.4 -55.3 -54.8 -10.2 3.0 -13.9 62 150 B M H <> S+ 0 0 122 -3,-0.7 4,-2.3 -4,-0.5 5,-0.2 0.944 115.6 49.3 -58.2 -51.0 -10.9 4.9 -10.6 63 151 B V H X S+ 0 0 84 -4,-1.6 4,-3.0 1,-0.2 5,-0.3 0.881 109.0 54.2 -56.6 -40.3 -7.3 6.1 -10.3 64 152 B G H X S+ 0 0 16 -4,-2.9 4,-2.3 -5,-0.2 -1,-0.2 0.900 108.5 47.9 -62.1 -42.2 -7.4 7.3 -14.0 65 153 B A H X S+ 0 0 6 -4,-2.0 4,-1.8 -5,-0.2 -2,-0.2 0.910 116.3 43.5 -65.4 -43.7 -10.5 9.4 -13.4 66 154 B L H X S+ 0 0 131 -4,-2.3 4,-2.2 2,-0.2 5,-0.2 0.963 114.9 47.7 -66.5 -53.8 -9.1 11.0 -10.2 67 155 B L H X S+ 0 0 108 -4,-3.0 4,-2.9 1,-0.2 5,-0.2 0.947 112.5 49.0 -52.1 -55.4 -5.6 11.6 -11.7 68 156 B L H X S+ 0 0 68 -4,-2.3 4,-3.4 -5,-0.3 5,-0.3 0.903 108.3 55.3 -52.2 -45.2 -7.0 13.1 -14.9 69 157 B L H X S+ 0 0 59 -4,-1.8 4,-2.5 1,-0.2 -1,-0.2 0.918 111.8 42.6 -55.1 -47.0 -9.3 15.4 -12.8 70 158 B L H X S+ 0 0 115 -4,-2.2 4,-1.7 2,-0.2 -1,-0.2 0.884 114.9 50.9 -67.8 -39.5 -6.4 16.7 -10.9 71 159 B V H X S+ 0 0 83 -4,-2.9 4,-1.9 -5,-0.2 -2,-0.2 0.935 114.4 42.5 -63.8 -48.0 -4.2 17.1 -14.0 72 160 B V H X S+ 0 0 63 -4,-3.4 4,-3.3 1,-0.2 5,-0.4 0.932 111.8 53.8 -64.8 -47.5 -6.9 18.9 -15.9 73 161 B A H X S+ 0 0 57 -4,-2.5 4,-1.9 -5,-0.3 -1,-0.2 0.847 110.7 48.4 -55.9 -35.7 -7.8 21.1 -13.0 74 162 B L H X S+ 0 0 109 -4,-1.7 4,-1.8 2,-0.2 -1,-0.2 0.875 114.3 44.8 -73.3 -38.8 -4.2 22.1 -12.7 75 163 B G H X S+ 0 0 45 -4,-1.9 4,-1.8 2,-0.2 -2,-0.2 0.893 118.3 42.1 -72.4 -40.9 -3.9 22.9 -16.4 76 164 B I H X S+ 0 0 96 -4,-3.3 4,-2.1 2,-0.2 -2,-0.2 0.871 116.4 48.8 -73.6 -38.3 -7.1 24.8 -16.7 77 165 B G H X S+ 0 0 36 -4,-1.9 4,-1.5 -5,-0.4 -2,-0.2 0.882 114.0 45.2 -69.1 -39.0 -6.5 26.7 -13.4 78 166 B L H X S+ 0 0 91 -4,-1.8 4,-1.7 2,-0.2 -2,-0.2 0.882 115.2 47.3 -71.7 -39.6 -3.0 27.7 -14.3 79 167 B F H < S+ 0 0 155 -4,-1.8 4,-0.4 2,-0.2 -2,-0.2 0.869 115.2 45.7 -69.4 -37.6 -4.0 28.7 -17.8 80 168 B M H <>S+ 0 0 92 -4,-2.1 5,-0.9 1,-0.2 3,-0.3 0.787 116.5 45.7 -75.4 -28.6 -6.9 30.7 -16.5 81 169 B R H ><5S+ 0 0 188 -4,-1.5 3,-2.4 1,-0.2 -2,-0.2 0.730 94.7 76.1 -85.1 -24.7 -4.8 32.3 -13.8 82 170 B R T 3<5S+ 0 0 219 -4,-1.7 -1,-0.2 1,-0.3 -2,-0.2 0.764 92.7 55.9 -57.1 -25.0 -1.9 33.0 -16.1 83 171 B R T 3 5S- 0 0 151 -4,-0.4 -1,-0.3 -3,-0.3 -2,-0.1 0.104 120.2-111.2 -94.8 21.2 -4.1 35.9 -17.4 84 172 B H T < 5 + 0 0 164 -3,-2.4 2,-1.2 1,-0.2 -3,-0.2 0.817 66.8 154.1 53.4 31.8 -4.4 37.3 -13.9 85 173 B I < + 0 0 85 -5,-0.9 2,-0.4 2,-0.0 -1,-0.2 -0.719 13.6 167.3 -95.0 88.3 -8.1 36.3 -14.0 86 174 B V - 0 0 74 -2,-1.2 3,-0.1 1,-0.1 -5,-0.0 -0.823 34.1-151.7-104.9 141.7 -9.1 35.8 -10.4 87 175 B R S S- 0 0 240 -2,-0.4 2,-0.3 1,-0.3 -1,-0.1 0.857 82.3 -2.6 -76.2 -36.9 -12.6 35.4 -9.2 88 176 B K 0 0 167 1,-0.1 -1,-0.3 0, 0.0 0, 0.0 -0.989 360.0 360.0-156.4 147.5 -11.9 36.8 -5.7 89 177 B R 0 0 259 -2,-0.3 -1,-0.1 -3,-0.1 -2,-0.0 0.524 360.0 360.0-135.1 360.0 -8.8 38.1 -3.8