==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL PROTEIN 16-JAN-02 1KTH . COMPND 2 MOLECULE: COLLAGEN ALPHA 3(VI) CHAIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR B.ARNOUX,A.DUCRUIX,T.PRANGE . 58 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3990.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 29 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 12 20.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 8.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 5.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 7 12.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A E 0 0 109 0, 0.0 54,-0.1 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0-148.2 -7.7 8.2 17.3 2 2 A T > - 0 0 74 52,-0.3 3,-1.8 1,-0.1 4,-0.2 -0.444 360.0-126.9 -70.8 146.7 -5.6 9.4 14.3 3 3 A D G > S+ 0 0 101 1,-0.3 3,-1.5 2,-0.2 4,-0.5 0.688 104.2 74.1 -65.9 -19.2 -6.2 7.5 11.0 4 4 A I G > S+ 0 0 53 1,-0.3 3,-1.5 2,-0.2 -1,-0.3 0.908 93.2 56.6 -54.3 -39.2 -2.4 6.8 10.7 5 5 A a G < S+ 0 0 0 -3,-1.8 -1,-0.3 1,-0.3 -2,-0.2 0.663 103.5 53.2 -71.1 -12.7 -3.0 4.3 13.6 6 6 A K G < S+ 0 0 111 -3,-1.5 -1,-0.3 -4,-0.2 -2,-0.2 0.403 81.5 114.9-100.5 -0.2 -5.6 2.5 11.4 7 7 A L S < S- 0 0 55 -3,-1.5 16,-0.1 -4,-0.5 3,-0.1 -0.373 76.0 -99.3 -63.9 149.6 -3.3 2.0 8.4 8 8 A P - 0 0 92 0, 0.0 35,-0.2 0, 0.0 2,-0.1 -0.321 40.7 -90.9 -67.9 153.1 -2.5 -1.6 7.7 9 9 A K - 0 0 95 -3,-0.1 2,-0.5 13,-0.1 35,-0.1 -0.461 47.2-165.4 -54.3 130.8 0.7 -3.3 8.7 10 10 A D - 0 0 52 33,-0.3 31,-0.3 -2,-0.1 3,-0.1 -0.875 20.0-175.1-133.4 99.8 3.0 -2.7 5.7 11 11 A E - 0 0 103 -2,-0.5 25,-2.6 1,-0.2 27,-0.2 0.692 31.8-167.1 -64.4 -18.6 6.2 -4.8 5.6 12 12 A G - 0 0 27 27,-0.3 2,-0.2 23,-0.2 27,-0.2 -0.233 18.9 -82.4 66.3-155.9 7.2 -2.9 2.6 13 13 A T B S+A 38 0A 92 25,-2.3 25,-2.0 -3,-0.1 3,-0.2 -0.739 74.5 76.7-141.6-174.0 10.1 -4.0 0.4 14 14 A b S S- 0 0 55 -2,-0.2 24,-0.1 23,-0.2 23,-0.1 -0.036 74.0-103.2 77.6 171.7 13.9 -3.8 0.3 15 15 A R S S+ 0 0 211 1,-0.1 2,-0.8 22,-0.1 22,-0.2 -0.021 85.0 107.1-129.1 31.1 16.2 -5.9 2.4 16 16 A D - 0 0 125 20,-2.6 2,-0.1 -3,-0.2 -1,-0.1 -0.650 62.6-162.0-103.5 71.1 17.3 -3.4 5.0 17 17 A F + 0 0 111 -2,-0.8 2,-0.4 17,-0.1 19,-0.2 -0.347 19.4 172.3 -75.7 132.9 15.2 -5.1 7.7 18 18 A I E -B 35 0B 91 17,-2.1 17,-2.9 -2,-0.1 2,-0.6 -1.000 33.7-122.9-134.3 136.1 14.3 -3.5 11.0 19 19 A L E +B 34 0B 70 -2,-0.4 15,-0.2 15,-0.2 2,-0.2 -0.711 44.0 169.4 -80.1 117.7 11.9 -4.8 13.6 20 20 A K E -B 33 0B 46 13,-3.1 13,-2.5 -2,-0.6 2,-0.4 -0.600 29.0-120.1-119.7 177.0 9.2 -2.1 14.1 21 21 A W E -BC 32 45B 29 24,-2.3 24,-2.1 11,-0.3 2,-0.3 -0.956 22.7-174.7-123.7 145.3 5.8 -1.9 15.9 22 22 A Y E -B 31 0B 37 9,-2.6 9,-2.6 -2,-0.4 2,-0.5 -0.956 29.7-109.8-132.2 155.0 2.4 -1.1 14.4 23 23 A Y E -B 30 0B 8 -2,-0.3 7,-0.3 7,-0.2 3,-0.0 -0.770 22.8-156.0 -86.8 128.0 -1.0 -0.5 16.0 24 24 A D E >>> -B 29 0B 29 5,-2.8 5,-1.5 -2,-0.5 4,-1.5 -0.893 2.5-164.4-101.0 107.2 -3.5 -3.2 15.4 25 25 A P T 345S+ 0 0 47 0, 0.0 -1,-0.1 0, 0.0 -19,-0.1 0.673 85.8 64.2 -66.9 -14.3 -7.0 -1.7 15.8 26 26 A N T 345S+ 0 0 150 1,-0.2 -3,-0.0 3,-0.1 -2,-0.0 0.778 117.6 25.2 -81.0 -26.8 -8.5 -5.2 16.1 27 27 A T T <45S- 0 0 84 -3,-0.9 -1,-0.2 2,-0.3 3,-0.1 0.478 102.6-131.0-105.8 -6.7 -6.6 -6.0 19.3 28 28 A K T <5S+ 0 0 135 -4,-1.5 2,-0.3 1,-0.2 -5,-0.0 0.885 76.0 95.0 49.3 48.4 -6.3 -2.3 20.2 29 29 A S E S- 0 0 47 -26,-0.1 4,-2.1 1,-0.1 5,-0.2 -0.974 71.8-121.8-145.3 157.0 9.3 0.8 20.2 48 48 A Q H > S+ 0 0 87 -2,-0.3 4,-2.8 1,-0.2 5,-0.2 0.888 112.2 57.4 -64.5 -40.2 6.1 -0.6 21.6 49 49 A K H > S+ 0 0 147 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.913 108.1 45.1 -61.4 -42.9 5.9 2.2 24.2 50 50 A E H > S+ 0 0 90 2,-0.2 4,-2.5 1,-0.2 5,-0.3 0.934 112.6 51.1 -67.3 -43.8 5.9 4.9 21.5 51 51 A c H X S+ 0 0 0 -4,-2.1 4,-2.5 1,-0.2 5,-0.4 0.926 112.1 48.0 -55.0 -45.0 3.3 3.1 19.4 52 52 A E H X S+ 0 0 60 -4,-2.8 4,-2.2 1,-0.2 -1,-0.2 0.911 109.7 51.4 -64.9 -42.9 1.1 2.7 22.4 53 53 A K H < S+ 0 0 160 -4,-2.4 -1,-0.2 -5,-0.2 -2,-0.2 0.938 117.6 38.9 -58.1 -46.7 1.4 6.4 23.5 54 54 A V H < S+ 0 0 62 -4,-2.5 -52,-0.3 -5,-0.2 -2,-0.2 0.895 132.5 18.6 -72.3 -38.8 0.4 7.6 20.0 55 55 A a H < S+ 0 0 0 -4,-2.5 -3,-0.2 -5,-0.3 -2,-0.2 0.692 90.0 102.5-114.3 -20.1 -2.3 5.0 19.1 56 56 A A < - 0 0 20 -4,-2.2 -27,-0.1 -5,-0.4 -28,-0.0 -0.315 64.2-131.2 -76.3 154.1 -3.8 3.2 22.1 57 57 A P 0 0 92 0, 0.0 -1,-0.1 0, 0.0 -28,-0.1 0.898 360.0 360.0 -64.6 -40.7 -7.1 4.1 23.5 58 58 A V 0 0 139 -6,-0.0 -2,-0.0 0, 0.0 0, 0.0 0.889 360.0 360.0 -91.8 360.0 -6.2 4.3 27.2