==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=23-JUL-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSPORT PROTEIN 19-JAN-10 2KT6 . COMPND 2 MOLECULE: OUTER MEMBRANE USHER PROTEIN PAPC; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR B.FORD,A.REGO,T.J.RAGAN,J.PINKNER,K.DODSON,P.C.DRISCOLL, . 85 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5263.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 63 74.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 7 8.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 24 28.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 3 3.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 17 20.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A V 0 0 153 0, 0.0 2,-0.4 0, 0.0 3,-0.2 0.000 360.0 360.0 360.0 -9.0 -10.2 -18.9 -2.2 2 2 A L + 0 0 136 1,-0.2 3,-0.1 3,-0.0 71,-0.1 -0.555 360.0 93.4-119.6 66.3 -7.1 -18.4 -0.0 3 3 A K S S- 0 0 210 1,-0.6 2,-0.3 -2,-0.4 -1,-0.2 0.564 110.2 -51.5 -98.3 -48.3 -4.2 -17.3 -2.1 4 4 A G - 0 0 30 -3,-0.2 -1,-0.6 68,-0.1 2,-0.2 -0.966 52.9-172.5-168.1-169.3 -5.4 -14.0 -1.0 5 5 A K - 0 0 104 -2,-0.3 2,-0.3 -3,-0.1 -3,-0.0 -0.329 56.4 -41.7-153.7-140.4 -8.2 -11.7 -0.7 6 6 A R - 0 0 131 39,-0.3 68,-1.2 -2,-0.2 39,-0.3 -0.751 64.1-174.3-114.7 156.2 -8.4 -8.2 0.3 7 7 A L E -A 44 0A 6 37,-1.6 2,-0.6 -2,-0.3 37,-0.5 -0.758 30.8 -99.2-144.6-177.4 -6.5 -6.9 3.2 8 8 A F E -Ab 43 76A 55 67,-2.5 69,-2.0 -2,-0.2 2,-0.4 -0.916 38.7-172.2-118.2 104.1 -5.5 -4.2 5.6 9 9 A A E -Ab 42 77A 3 33,-2.5 33,-2.0 -2,-0.6 2,-0.7 -0.779 16.4-154.6-102.9 143.3 -2.3 -2.3 4.7 10 10 A I E -Ab 41 78A 45 67,-2.2 69,-2.8 -2,-0.4 2,-0.5 -0.889 16.7-164.8-112.8 99.8 -0.4 0.2 6.8 11 11 A L E + b 0 79A 0 29,-1.9 2,-0.4 -2,-0.7 67,-0.1 -0.721 11.5 177.5 -93.4 128.7 1.6 2.4 4.5 12 12 A R E - b 0 80A 97 67,-2.3 69,-3.0 -2,-0.5 6,-0.3 -0.992 32.0-118.1-135.4 131.6 4.3 4.5 6.0 13 13 A L E > - b 0 81A 16 4,-1.1 3,-1.7 -2,-0.4 69,-0.2 -0.367 32.4-121.2 -54.0 142.1 6.9 6.9 4.8 14 14 A A T 3 S+ 0 0 76 67,-1.5 -1,-0.1 1,-0.3 68,-0.1 0.762 112.9 64.0 -60.9 -26.4 10.4 5.6 5.5 15 15 A D T 3 S- 0 0 139 1,-0.1 -1,-0.3 0, 0.0 3,-0.1 0.775 129.3 -95.4 -65.8 -25.5 10.9 8.9 7.5 16 16 A G S < S+ 0 0 59 -3,-1.7 -2,-0.2 1,-0.2 2,-0.1 0.452 94.0 114.4 111.2 11.0 8.2 7.8 9.9 17 17 A S - 0 0 62 64,-0.1 -4,-1.1 -4,-0.1 -1,-0.2 -0.117 59.8-105.1 -97.2-160.6 5.6 9.9 8.0 18 18 A Q - 0 0 35 -6,-0.3 -6,-0.2 -2,-0.1 22,-0.0 -0.988 14.3-143.1-139.2 134.8 2.6 8.7 6.1 19 19 A P - 0 0 0 0, 0.0 -8,-0.2 0, 0.0 3,-0.2 -0.910 63.1-166.9 -76.4 103.3 1.1 8.2 2.7 20 20 A P > - 0 0 32 0, 0.0 3,-2.2 0, 0.0 16,-0.4 0.064 28.2 -20.3 -98.6-163.7 -2.0 9.4 4.4 21 21 A F T 3 S+ 0 0 135 18,-0.7 16,-0.2 1,-0.3 3,-0.1 -0.132 133.1 23.5 -48.6 109.6 -5.7 9.5 3.8 22 22 A G T 3 S+ 0 0 30 14,-2.1 2,-1.2 1,-0.3 -1,-0.3 0.416 78.5 156.5 111.9 3.2 -6.2 9.1 0.0 23 23 A A < - 0 0 0 -3,-2.2 13,-1.1 -4,-0.2 2,-0.8 -0.527 33.4-150.7 -65.3 95.7 -2.9 7.4 -0.6 24 24 A S E -CD 35 56A 32 32,-3.3 32,-2.0 -2,-1.2 2,-0.7 -0.675 10.4-164.4 -67.6 105.6 -3.6 5.7 -3.8 25 25 A V E +CD 34 55A 0 9,-3.1 9,-2.1 -2,-0.8 8,-1.4 -0.886 28.1 141.3-100.5 112.2 -1.5 2.5 -3.8 26 26 A T E -C 32 0A 25 28,-2.5 28,-0.4 -2,-0.7 6,-0.3 -0.958 48.6-117.2-149.5 129.0 -1.3 1.0 -7.2 27 27 A S > - 0 0 12 4,-1.8 3,-1.8 -2,-0.3 26,-0.2 -0.068 40.4 -96.0 -62.8 171.3 1.7 -0.6 -8.8 28 28 A E T 3 S+ 0 0 156 24,-1.0 -1,-0.1 1,-0.3 25,-0.1 0.609 130.7 53.3 -68.4 -7.6 3.2 1.0 -12.0 29 29 A K T 3 S- 0 0 194 2,-0.0 -1,-0.3 0, 0.0 3,-0.1 0.572 131.2 -97.3 -93.7 -14.0 1.2 -1.5 -13.9 30 30 A G < + 0 0 35 -3,-1.8 2,-1.8 1,-0.2 -2,-0.2 0.750 60.4 167.5 100.7 31.6 -1.9 -0.4 -12.1 31 31 A R - 0 0 126 1,-0.1 -4,-1.8 17,-0.0 2,-1.3 -0.663 23.1-161.4 -73.9 89.2 -2.0 -3.0 -9.5 32 32 A E E +C 26 0A 150 -2,-1.8 -6,-0.3 -6,-0.3 3,-0.1 -0.646 26.4 162.4 -86.1 94.9 -4.5 -1.1 -7.5 33 33 A L E - 0 0 3 -8,-1.4 12,-1.4 -2,-1.3 2,-0.3 0.868 55.1 -84.8 -80.8 -37.6 -4.4 -2.5 -4.0 34 34 A G E -C 25 0A 13 -9,-2.1 -9,-3.1 10,-0.2 2,-0.3 -0.994 33.3 -88.3 167.3-159.4 -6.1 0.4 -2.4 35 35 A M E -C 24 0A 109 -2,-0.3 8,-1.0 -11,-0.3 -11,-0.2 -0.986 40.2-102.2-151.8 137.5 -6.2 3.9 -0.8 36 36 A V B +E 42 0A 2 -13,-1.1 -14,-2.1 -16,-0.4 6,-0.3 -0.423 33.6 178.2 -61.8 129.5 -5.7 5.1 2.8 37 37 A A + 0 0 46 4,-2.7 -1,-0.1 1,-0.4 2,-0.1 -0.293 68.5 18.1-130.7 55.0 -8.9 6.0 4.4 38 38 A D S > S- 0 0 95 1,-0.2 3,-2.8 0, 0.0 2,-0.5 -0.184 123.9 -35.7 149.0 122.1 -7.8 7.0 7.9 39 39 A E T 3 S- 0 0 132 1,-0.3 -18,-0.7 -3,-0.1 -1,-0.2 -0.328 123.3 -33.8 52.1-102.2 -4.3 8.0 9.1 40 40 A G T 3 S+ 0 0 2 -2,-0.5 -29,-1.9 -20,-0.2 2,-0.7 -0.038 105.0 119.0-137.8 29.3 -2.2 5.8 7.0 41 41 A L E < -A 10 0A 39 -3,-2.8 -4,-2.7 -31,-0.2 2,-0.5 -0.886 40.2-170.7-103.3 111.1 -4.3 2.7 6.7 42 42 A A E -AE 9 36A 0 -33,-2.0 -33,-2.5 -2,-0.7 2,-1.6 -0.902 23.1-135.1-101.9 126.6 -5.4 1.7 3.2 43 43 A W E -A 8 0A 108 -8,-1.0 -8,-0.3 -2,-0.5 -35,-0.2 -0.632 38.5-170.6 -75.1 89.0 -8.0 -1.0 2.9 44 44 A L E -A 7 0A 0 -2,-1.6 -37,-1.6 -37,-0.5 2,-0.3 -0.185 22.5-139.6 -83.3 177.3 -6.2 -2.9 0.3 45 45 A S S S- 0 0 54 -12,-1.4 -39,-0.3 -39,-0.3 28,-0.1 -0.745 72.9 -28.7-138.8 85.7 -7.5 -5.7 -1.8 46 46 A G - 0 0 15 -2,-0.3 2,-0.3 26,-0.1 -40,-0.1 1.000 62.7-156.8 75.6 75.9 -4.9 -8.4 -2.4 47 47 A V - 0 0 16 25,-0.4 -1,-0.1 -14,-0.1 -42,-0.1 -0.655 17.6-129.5 -81.7 134.4 -1.4 -7.1 -2.4 48 48 A T > - 0 0 57 -2,-0.3 3,-0.5 -17,-0.1 2,-0.5 -0.733 22.3-118.1 -86.5 127.9 1.0 -9.3 -4.3 49 49 A P T 3 S+ 0 0 64 0, 0.0 20,-0.3 0, 0.0 -1,-0.1 -0.507 98.2 32.0 -64.7 115.2 4.2 -10.2 -2.4 50 50 A G T 3 S+ 0 0 57 17,-0.8 2,-0.2 18,-0.5 19,-0.1 0.763 91.0 127.1 109.3 36.2 7.2 -8.8 -4.4 51 51 A E E < -H 67 0B 38 16,-0.6 16,-2.4 -3,-0.5 2,-0.4 -0.603 57.6-128.0-117.0 176.8 5.8 -5.7 -6.0 52 52 A T E -H 66 0B 61 14,-0.2 -24,-1.0 -2,-0.2 14,-0.2 -0.830 31.0-162.4-127.3 92.4 6.5 -2.1 -6.4 53 53 A L - 0 0 0 12,-2.8 2,-0.4 -2,-0.4 -26,-0.3 -0.198 11.2-138.3 -58.9 158.9 3.4 -0.1 -5.4 54 54 A S - 0 0 8 -28,-0.4 -28,-2.5 10,-0.3 2,-0.6 -0.987 15.8-156.8-125.2 121.4 2.9 3.5 -6.4 55 55 A V E -DF 25 63A 0 8,-2.2 7,-2.0 -2,-0.4 8,-0.9 -0.871 13.5-180.0-109.4 122.2 1.4 5.7 -3.7 56 56 A N E +D 24 0A 35 -32,-2.0 -32,-3.3 -2,-0.6 5,-0.3 -0.938 16.4 127.1-123.8 132.5 -0.4 8.9 -4.7 57 57 A W S S- 0 0 41 3,-0.5 4,-0.1 -2,-0.4 -35,-0.1 -0.522 74.6 -26.9-147.2-142.9 -2.1 11.6 -2.6 58 58 A D S S+ 0 0 145 1,-0.3 3,-0.1 -2,-0.2 -36,-0.0 0.967 150.3 30.7 -37.5 -63.1 -2.2 15.4 -2.1 59 59 A G S S- 0 0 43 1,-0.3 -1,-0.3 -3,-0.0 2,-0.1 0.458 117.2-149.1 -80.2 0.4 1.4 15.5 -3.3 60 60 A K + 0 0 126 -3,-0.1 2,-1.3 2,-0.1 -3,-0.5 -0.385 60.0 12.3 74.7-140.3 0.4 12.5 -5.4 61 61 A I S S+ 0 0 73 -5,-0.3 -5,-0.3 1,-0.2 3,-0.1 -0.609 80.8 132.6 -77.9 98.8 2.7 9.8 -6.3 62 62 A Q + 0 0 70 -7,-2.0 22,-1.9 -2,-1.3 2,-0.3 0.688 64.8 27.2-118.9 -41.8 5.5 10.6 -4.0 63 63 A a E -FG 55 83A 0 -8,-0.9 -8,-2.2 -3,-0.4 -1,-0.5 -0.850 67.6-152.3-118.2 158.1 6.4 7.4 -2.4 64 64 A Q E - G 0 82A 38 18,-2.5 18,-2.6 -2,-0.3 2,-0.6 -0.922 19.7-117.1-126.9 156.5 6.0 4.0 -3.7 65 65 A V E - G 0 81A 1 -2,-0.3 -12,-2.8 16,-0.2 2,-0.8 -0.816 10.5-146.7-106.8 131.9 5.6 0.9 -1.8 66 66 A N E -H 52 0B 93 14,-2.1 -14,-0.2 -2,-0.6 -12,-0.0 -0.787 17.5-155.0 -90.5 110.8 8.0 -2.0 -1.7 67 67 A V E -H 51 0B 3 -16,-2.4 -17,-0.8 -2,-0.8 -16,-0.6 -0.789 9.8-159.0 -92.6 114.3 6.0 -5.1 -1.3 68 68 A P > - 0 0 46 0, 0.0 3,-0.9 0, 0.0 -18,-0.5 -0.266 34.8 -99.5 -81.5 172.7 8.0 -8.0 0.3 69 69 A E T 3 S+ 0 0 178 -20,-0.3 -2,-0.0 1,-0.3 0, 0.0 0.566 110.2 82.3 -72.7 -6.9 7.2 -11.7 0.0 70 70 A T T 3 + 0 0 96 2,-0.0 -1,-0.3 0, 0.0 -3,-0.0 0.214 63.1 134.4 -85.1 18.6 5.6 -11.6 3.5 71 71 A A < - 0 0 22 -3,-0.9 2,-0.3 6,-0.0 -23,-0.0 -0.296 34.2-172.5 -66.2 153.5 2.3 -10.3 2.1 72 72 A I - 0 0 76 3,-0.2 -25,-0.4 -24,-0.1 2,-0.3 -0.916 21.2-102.8-148.3 168.0 -0.8 -11.9 3.4 73 73 A S S S- 0 0 16 -2,-0.3 -66,-0.2 1,-0.2 3,-0.1 -0.746 89.9 -7.6-101.3 143.3 -4.6 -12.1 2.9 74 74 A D S S+ 0 0 85 -68,-1.2 2,-0.3 -2,-0.3 -67,-0.2 0.688 111.8 97.7 51.8 23.4 -7.4 -10.4 5.0 75 75 A Q S S- 0 0 110 -3,-0.3 -67,-2.5 2,-0.0 2,-0.3 -0.823 80.0 -89.7-134.0 173.1 -4.8 -9.3 7.6 76 76 A Q E +b 8 0A 117 -2,-0.3 2,-0.3 -69,-0.2 -67,-0.2 -0.637 40.0 171.4 -86.3 142.0 -2.8 -6.2 8.4 77 77 A L E -b 9 0A 31 -69,-2.0 -67,-2.2 -2,-0.3 2,-0.3 -0.897 23.3-143.6-150.7 116.6 0.6 -5.6 6.9 78 78 A L E -b 10 0A 111 -2,-0.3 -67,-0.2 -69,-0.2 -37,-0.0 -0.634 23.9-162.3 -82.7 141.7 2.6 -2.5 7.2 79 79 A L E -b 11 0A 3 -69,-2.8 -67,-2.3 -2,-0.3 2,-0.7 -0.939 22.8-104.9-131.5 147.8 4.6 -1.5 4.1 80 80 A P E -b 12 0A 52 0, 0.0 -14,-2.1 0, 0.0 2,-1.0 -0.603 23.7-163.7 -76.0 109.9 7.5 0.8 3.2 81 81 A a E -bG 13 65A 0 -69,-3.0 -67,-1.5 -2,-0.7 -16,-0.2 -0.835 18.7-171.5 -91.1 93.5 6.4 3.9 1.4 82 82 A T E - G 0 64A 69 -18,-2.6 -18,-2.5 -2,-1.0 -69,-0.1 -0.818 20.9-120.9 -97.3 126.3 9.8 5.0 0.0 83 83 A P E - G 0 63A 50 0, 0.0 -20,-0.3 0, 0.0 -21,-0.1 -0.280 15.7-126.8 -61.1 148.7 10.1 8.4 -1.7 84 84 A Q 0 0 103 -22,-1.9 -21,-0.1 -23,-0.1 -22,-0.0 0.815 360.0 360.0 -66.7 -30.6 11.3 8.5 -5.3 85 85 A K 0 0 227 -23,-0.3 -22,-0.0 0, 0.0 -23,-0.0 0.747 360.0 360.0-108.0 360.0 14.0 10.9 -4.2