==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-MAR-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 26-JAN-10 2KTA . COMPND 2 MOLECULE: PUTATIVE HELICASE; . SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES VULGATUS; . AUTHOR J.L.MILLS,D.K.SUKUMARAN,B.SATHYAMOORTHY,R.L.BELOTE,C.CICCOSA . 74 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6504.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 46 62.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 8.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 4.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 35 47.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 224 0, 0.0 2,-0.1 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0 -62.1 -16.2 5.8 8.4 2 2 A N - 0 0 146 1,-0.0 0, 0.0 0, 0.0 0, 0.0 -0.369 360.0 -77.2-114.6-163.2 -18.7 5.4 5.5 3 3 A Q + 0 0 143 -2,-0.1 3,-0.4 1,-0.1 7,-0.2 0.935 66.6 169.1 -64.0 -46.7 -18.3 4.2 1.9 4 4 A N - 0 0 105 1,-0.2 3,-0.2 2,-0.1 -1,-0.1 -0.137 59.5 -71.8 60.0-164.2 -16.8 7.5 0.7 5 5 A L S S+ 0 0 171 1,-0.2 3,-0.5 2,-0.1 -1,-0.2 0.314 116.3 90.2-102.4 5.9 -15.3 7.7 -2.8 6 6 A Q > + 0 0 113 -3,-0.4 4,-2.4 1,-0.2 -1,-0.2 -0.145 41.0 126.1 -97.9 37.8 -12.4 5.5 -1.6 7 7 A G H > S+ 0 0 25 1,-0.2 4,-2.5 2,-0.2 -1,-0.2 0.871 74.0 55.0 -62.1 -37.7 -14.0 2.2 -2.5 8 8 A E H > S+ 0 0 140 -3,-0.5 4,-3.1 2,-0.2 5,-0.3 0.932 107.7 49.4 -57.5 -48.8 -10.9 1.3 -4.5 9 9 A W H > S+ 0 0 53 1,-0.2 4,-3.0 2,-0.2 -2,-0.2 0.940 111.1 49.3 -56.0 -50.1 -8.7 2.0 -1.5 10 10 A M H X S+ 0 0 95 -4,-2.4 4,-1.7 1,-0.2 -1,-0.2 0.915 115.1 44.1 -56.6 -45.5 -10.9 -0.2 0.7 11 11 A K H X S+ 0 0 83 -4,-2.5 4,-1.2 1,-0.2 -2,-0.2 0.917 117.0 44.3 -68.4 -45.2 -10.8 -3.0 -1.8 12 12 A N H X S+ 0 0 6 -4,-3.1 4,-2.7 2,-0.2 5,-0.3 0.860 108.5 58.9 -69.6 -35.9 -7.1 -2.8 -2.5 13 13 A Y H X S+ 0 0 37 -4,-3.0 4,-2.8 -5,-0.3 -2,-0.2 0.949 108.8 42.4 -59.3 -51.0 -6.2 -2.5 1.2 14 14 A E H X S+ 0 0 105 -4,-1.7 4,-1.8 1,-0.2 -1,-0.2 0.780 114.1 54.2 -68.8 -25.1 -7.8 -5.8 2.1 15 15 A E H X S+ 0 0 67 -4,-1.2 4,-1.5 2,-0.2 -1,-0.2 0.904 114.6 38.6 -72.2 -41.1 -6.3 -7.3 -1.0 16 16 A L H X S+ 0 0 1 -4,-2.7 4,-3.3 2,-0.2 5,-0.3 0.817 111.5 60.8 -79.9 -31.5 -2.8 -6.2 -0.0 17 17 A K H X S+ 0 0 107 -4,-2.8 4,-1.6 -5,-0.3 -2,-0.2 0.933 110.9 39.1 -55.7 -49.8 -3.5 -6.9 3.6 18 18 A S H < S+ 0 0 80 -4,-1.8 4,-0.5 2,-0.2 -2,-0.2 0.817 115.7 53.8 -72.8 -31.1 -4.1 -10.6 2.7 19 19 A F H >X>S+ 0 0 45 -4,-1.5 4,-2.9 2,-0.2 3,-1.0 0.931 109.8 45.4 -70.8 -47.0 -1.2 -10.5 0.2 20 20 A V H 3X5S+ 0 0 0 -4,-3.3 4,-0.6 1,-0.3 -2,-0.2 0.856 103.8 63.5 -65.2 -34.3 1.3 -9.2 2.7 21 21 A R H 3<5S+ 0 0 199 -4,-1.6 -1,-0.3 -5,-0.3 -2,-0.2 0.767 115.1 35.0 -58.5 -20.9 0.0 -11.7 5.3 22 22 A K H <45S+ 0 0 138 -3,-1.0 -2,-0.2 -4,-0.5 -1,-0.2 0.861 141.8 4.4-100.5 -47.8 1.3 -14.3 2.8 23 23 A Y H <5S- 0 0 147 -4,-2.9 -3,-0.2 -5,-0.1 -2,-0.1 0.695 86.0-127.6-111.5 -25.9 4.5 -12.8 1.2 24 24 A R S < S+ 0 0 56 1,-0.2 4,-2.6 2,-0.1 5,-0.2 -0.469 88.6 45.2 74.6 -83.4 -1.8 -7.0 -11.9 33 33 A N H > S+ 0 0 70 -2,-1.9 4,-2.3 2,-0.2 -1,-0.2 0.961 122.6 34.2 -65.0 -55.6 -4.0 -4.9 -9.5 34 34 A L H > S+ 0 0 1 -3,-0.5 4,-2.9 1,-0.2 5,-0.2 0.859 115.9 59.9 -67.0 -34.3 -1.5 -4.6 -6.7 35 35 A G H > S+ 0 0 6 1,-0.2 4,-1.6 2,-0.2 -2,-0.2 0.907 109.7 40.7 -59.3 -43.1 1.3 -4.4 -9.2 36 36 A G H X S+ 0 0 35 -4,-2.6 4,-2.2 2,-0.2 5,-0.2 0.890 113.2 54.1 -72.4 -39.1 -0.2 -1.4 -10.8 37 37 A W H X S+ 0 0 35 -4,-2.3 4,-2.2 1,-0.2 -2,-0.2 0.896 109.8 48.0 -60.1 -42.5 -1.1 0.2 -7.5 38 38 A C H X S+ 0 0 24 -4,-2.9 4,-1.6 2,-0.2 -1,-0.2 0.877 107.4 56.4 -66.1 -38.8 2.5 -0.2 -6.4 39 39 A H H X S+ 0 0 127 -4,-1.6 4,-0.6 1,-0.2 3,-0.3 0.936 114.0 38.7 -59.3 -47.9 3.7 1.3 -9.6 40 40 A T H >X S+ 0 0 76 -4,-2.2 4,-1.0 1,-0.2 3,-0.7 0.863 110.1 62.9 -67.2 -35.1 1.6 4.4 -9.0 41 41 A Q H 3X S+ 0 0 29 -4,-2.2 4,-1.9 1,-0.2 5,-0.3 0.772 90.0 68.1 -65.1 -28.4 2.5 4.3 -5.3 42 42 A R H 3X S+ 0 0 109 -4,-1.6 4,-2.3 -3,-0.3 -1,-0.2 0.926 102.7 44.3 -54.8 -46.5 6.2 4.8 -6.1 43 43 A K H S+ 0 0 32 -4,-1.0 4,-1.7 2,-0.2 5,-1.6 0.938 112.3 35.0 -67.1 -46.2 3.3 8.9 -4.2 45 45 A R H <5S+ 0 0 106 -4,-1.9 -2,-0.2 2,-0.2 -1,-0.2 0.847 118.0 54.5 -75.5 -35.7 6.1 8.3 -1.8 46 46 A K H <5S+ 0 0 166 -4,-2.3 -2,-0.2 -5,-0.3 -3,-0.2 0.933 115.0 38.6 -61.0 -47.3 8.6 10.0 -4.2 47 47 A Q H <5S- 0 0 138 -4,-2.9 -2,-0.2 -5,-0.1 -1,-0.2 0.825 107.1-125.9 -75.4 -31.9 6.5 13.1 -4.4 48 48 A G T <5S+ 0 0 61 -4,-1.7 -3,-0.2 -5,-0.2 -4,-0.1 0.675 78.5 117.3 90.4 21.6 5.6 13.1 -0.7 49 49 A K < + 0 0 124 -5,-1.6 -4,-0.2 -6,-0.3 -5,-0.1 0.462 40.7 123.1 -96.0 -5.1 1.8 13.3 -1.4 50 50 A L - 0 0 24 -6,-1.4 2,-0.4 -7,-0.1 3,-0.0 -0.280 67.0-119.2 -57.4 139.0 1.4 9.9 0.2 51 51 A P > - 0 0 69 0, 0.0 4,-2.9 0, 0.0 5,-0.2 -0.714 9.4-142.9 -82.5 128.1 -1.1 9.8 3.2 52 52 A N H > S+ 0 0 124 -2,-0.4 4,-3.0 1,-0.2 5,-0.2 0.786 102.9 56.9 -61.1 -28.5 0.5 8.7 6.5 53 53 A D H > S+ 0 0 127 2,-0.2 4,-2.7 1,-0.2 -1,-0.2 0.941 110.5 42.5 -66.9 -46.1 -2.7 6.9 7.3 54 54 A R H > S+ 0 0 14 2,-0.2 4,-1.6 1,-0.2 -2,-0.2 0.903 116.5 50.2 -62.4 -41.6 -2.4 4.9 4.1 55 55 A R H X S+ 0 0 90 -4,-2.9 4,-1.5 1,-0.2 -2,-0.2 0.913 113.2 45.2 -62.0 -44.6 1.3 4.5 4.8 56 56 A L H X S+ 0 0 84 -4,-3.0 4,-2.6 2,-0.2 -2,-0.2 0.886 106.7 58.3 -69.6 -42.0 0.6 3.4 8.4 57 57 A L H X S+ 0 0 52 -4,-2.7 4,-1.1 1,-0.2 -1,-0.2 0.898 110.7 42.6 -57.9 -43.1 -2.1 0.9 7.5 58 58 A L H X>S+ 0 0 1 -4,-1.6 5,-3.1 2,-0.2 4,-0.6 0.848 112.3 54.5 -71.6 -33.4 0.2 -1.0 5.2 59 59 A D H ><5S+ 0 0 68 -4,-1.5 3,-0.7 1,-0.2 -2,-0.2 0.899 106.6 52.3 -64.9 -38.4 3.0 -0.8 7.7 60 60 A K H 3<5S+ 0 0 151 -4,-2.6 -1,-0.2 1,-0.2 -2,-0.2 0.776 106.4 52.1 -69.9 -30.0 0.7 -2.4 10.3 61 61 A I H 3<5S- 0 0 34 -4,-1.1 -1,-0.2 -5,-0.2 -2,-0.2 0.578 129.5 -95.1 -84.6 -8.5 -0.2 -5.3 8.1 62 62 A G T <<5 + 0 0 31 -3,-0.7 2,-1.0 -4,-0.6 -3,-0.2 0.634 67.9 156.2 108.1 18.4 3.5 -5.9 7.6 63 63 A F < - 0 0 19 -5,-3.1 2,-0.3 -6,-0.1 -1,-0.2 -0.676 32.2-150.5 -79.4 104.7 4.3 -4.1 4.3 64 64 A V - 0 0 72 -2,-1.0 -5,-0.0 1,-0.1 -1,-0.0 -0.563 17.2-165.2 -80.4 136.7 8.0 -3.4 4.7 65 65 A W - 0 0 38 -2,-0.3 3,-0.3 1,-0.1 -1,-0.1 0.759 29.3-169.0 -89.3 -29.0 9.4 -0.3 2.9 66 66 A S - 0 0 65 1,-0.2 2,-0.7 2,-0.1 3,-0.2 0.040 38.4 -71.2 65.2-179.5 13.0 -1.5 3.3 67 67 A L + 0 0 159 1,-0.2 -1,-0.2 3,-0.0 3,-0.1 -0.766 66.6 149.2-110.5 83.5 16.1 0.6 2.6 68 68 A E + 0 0 73 -2,-0.7 2,-1.0 -3,-0.3 -1,-0.2 0.839 67.4 58.4 -82.4 -38.7 15.9 1.0 -1.2 69 69 A H S S- 0 0 148 -3,-0.2 2,-1.7 2,-0.1 -1,-0.2 -0.808 81.5-154.9 -93.4 95.7 17.5 4.4 -1.1 70 70 A H + 0 0 165 -2,-1.0 2,-0.1 -3,-0.1 -3,-0.0 -0.565 58.4 99.6 -77.2 87.9 20.8 3.7 0.6 71 71 A H - 0 0 134 -2,-1.7 2,-0.5 3,-0.0 -1,-0.1 -0.458 46.7-174.0-172.3 88.3 21.5 7.2 2.0 72 72 A H - 0 0 139 1,-0.1 -2,-0.0 -2,-0.1 0, 0.0 -0.813 13.9-167.8 -96.1 126.7 20.8 7.9 5.6 73 73 A H 0 0 190 -2,-0.5 -1,-0.1 1,-0.3 0, 0.0 0.504 360.0 360.0 -87.4 -6.9 21.2 11.5 6.8 74 74 A H 0 0 225 -3,-0.0 -1,-0.3 0, 0.0 -3,-0.0 -0.644 360.0 360.0-146.8 360.0 20.9 10.2 10.3