==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER EXTRACELLULAR MATRIX 04-MAR-97 1KUN . COMPND 2 MOLECULE: ALPHA3-CHAIN TYPE VI COLLAGEN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR M.D.SORENSEN,S.BJORN,K.NORRIS,O.OLSEN,L.PETERSEN,T.L.JAMES, . 58 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3902.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 31 53.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 17.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 12.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 8.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 6 10.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A E 0 0 145 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 153.1 -8.8 -14.4 -2.1 2 2 A T + 0 0 158 1,-0.2 2,-0.3 2,-0.1 3,-0.0 0.869 360.0 127.3 47.8 37.1 -6.9 -12.8 0.9 3 3 A D > - 0 0 55 1,-0.1 3,-3.1 0, 0.0 4,-0.3 -0.815 51.6-163.7-125.0 78.3 -4.6 -11.8 -1.8 4 4 A I G > S+ 0 0 54 -2,-0.3 3,-2.3 1,-0.3 19,-0.1 0.767 84.3 79.0 -36.9 -29.8 -4.0 -8.0 -1.7 5 5 A a G 3 S+ 0 0 35 1,-0.3 -1,-0.3 49,-0.1 23,-0.1 0.642 86.6 57.7 -57.2 -19.0 -2.7 -8.4 -5.3 6 6 A K G < S+ 0 0 103 -3,-3.1 -1,-0.3 18,-0.1 -2,-0.2 0.385 85.2 98.7 -94.7 -2.0 -6.3 -8.5 -6.5 7 7 A L S < S- 0 0 70 -3,-2.3 16,-0.1 -4,-0.3 3,-0.1 -0.760 75.3-119.3 -93.5 132.6 -7.2 -5.1 -4.9 8 8 A P - 0 0 95 0, 0.0 35,-0.3 0, 0.0 33,-0.1 -0.154 43.7 -65.1 -74.6 162.9 -7.2 -2.1 -7.4 9 9 A K - 0 0 77 1,-0.1 2,-0.9 13,-0.1 35,-0.1 -0.152 54.1-135.3 -44.3 125.3 -5.0 1.1 -7.3 10 10 A D + 0 0 9 33,-0.6 2,-1.0 -3,-0.1 26,-0.7 -0.591 37.8 162.5 -94.9 80.8 -5.9 3.2 -4.1 11 11 A E - 0 0 74 -2,-0.9 2,-1.3 24,-0.2 3,-0.2 -0.108 38.6-151.7 -89.6 45.7 -6.4 7.1 -4.5 12 12 A G - 0 0 2 -2,-1.0 27,-1.4 1,-0.2 26,-0.3 0.142 20.5-116.2 -14.3 48.7 -8.2 6.9 -1.1 13 13 A T S S+ 0 0 119 -2,-1.3 -1,-0.2 25,-0.1 2,-0.1 0.531 77.2 110.2 5.2 56.1 -10.6 9.9 -1.5 14 14 A b S S- 0 0 30 -3,-0.2 -1,-0.1 24,-0.1 3,-0.1 -0.130 80.2 -87.8-120.4-144.3 -9.0 11.9 1.4 15 15 A R S S+ 0 0 198 -3,-0.1 -2,-0.1 1,-0.1 21,-0.1 0.505 104.1 63.0-119.4 2.5 -6.9 15.1 1.9 16 16 A D - 0 0 75 2,-0.1 -1,-0.1 0, 0.0 19,-0.1 -0.018 61.4-179.9-116.3 24.0 -3.2 14.0 1.6 17 17 A F + 0 0 82 -3,-0.1 2,-0.3 17,-0.1 19,-0.2 0.060 13.7 167.2 -33.8 96.0 -2.9 12.7 -2.0 18 18 A I E -A 35 0A 89 17,-2.7 17,-1.3 0, 0.0 2,-0.4 -0.819 40.4-100.2-113.5 155.9 0.8 11.7 -2.2 19 19 A L E +A 34 0A 75 -2,-0.3 15,-0.2 15,-0.2 2,-0.2 -0.590 50.3 160.5 -83.0 134.4 2.3 9.6 -5.0 20 20 A K E -A 33 0A 32 13,-2.8 13,-2.8 -2,-0.4 2,-0.4 -0.806 37.5-100.5-138.1-179.2 2.9 5.8 -4.3 21 21 A W E -AB 32 45A 50 24,-2.6 24,-3.5 11,-0.2 2,-0.3 -0.881 31.9-170.9-110.2 139.9 3.4 2.4 -6.1 22 22 A Y E -A 31 0A 43 9,-2.8 9,-2.4 -2,-0.4 2,-0.4 -0.962 25.0-112.8-130.3 151.1 0.7 -0.1 -6.7 23 23 A Y E -A 30 0A 12 -2,-0.3 7,-0.3 7,-0.2 3,-0.1 -0.686 20.8-155.7 -86.3 128.4 0.8 -3.7 -8.0 24 24 A D E >>> -A 29 0A 19 5,-2.7 4,-3.1 -2,-0.4 3,-1.7 -0.835 4.8-160.7-105.6 90.6 -0.9 -4.4 -11.3 25 25 A P T 345S+ 0 0 65 0, 0.0 -1,-0.1 0, 0.0 -19,-0.1 0.738 89.9 67.1 -34.8 -29.9 -1.9 -8.2 -11.7 26 26 A N T 345S+ 0 0 139 1,-0.1 -3,-0.0 3,-0.1 -2,-0.0 0.917 123.9 12.2 -65.5 -42.1 -2.0 -7.7 -15.5 27 27 A T T <45S- 0 0 74 -3,-1.7 -1,-0.1 2,-0.2 3,-0.1 0.878 97.4-134.3 -94.2 -52.0 1.8 -7.2 -15.6 28 28 A K T <5S+ 0 0 62 -4,-3.1 2,-0.2 1,-0.4 30,-0.1 0.629 77.2 86.8 93.8 36.7 2.5 -8.4 -12.1 29 29 A S E > S- 0 0 68 -26,-0.1 3,-1.7 1,-0.1 4,-1.6 -0.997 76.8-111.8-148.1 145.5 8.9 2.1 -4.1 48 48 A Q H 3> S+ 0 0 80 -2,-0.3 4,-3.1 1,-0.3 5,-0.3 0.909 117.1 60.4 -45.3 -45.0 8.4 -0.6 -6.7 49 49 A K H 3> S+ 0 0 133 2,-0.2 4,-1.0 1,-0.2 -1,-0.3 0.849 101.7 50.7 -54.3 -35.2 10.9 -2.8 -4.8 50 50 A E H X> S+ 0 0 95 -3,-1.7 3,-1.4 2,-0.2 4,-1.4 0.984 112.0 48.0 -64.4 -54.9 8.7 -2.8 -1.7 51 51 A c H >X>S+ 0 0 1 -4,-1.6 4,-3.0 1,-0.3 5,-1.3 0.935 108.0 55.1 -44.7 -55.1 5.8 -3.9 -3.9 52 52 A E H 3<5S+ 0 0 55 -4,-3.1 -1,-0.3 1,-0.3 -2,-0.2 0.787 109.7 48.5 -51.4 -31.3 8.1 -6.6 -5.4 53 53 A K H <<5S+ 0 0 133 -3,-1.4 -1,-0.3 -4,-1.0 -2,-0.2 0.712 116.1 41.3 -86.5 -21.2 8.7 -7.8 -1.8 54 54 A V H <<5S- 0 0 76 -4,-1.4 -2,-0.2 -3,-1.2 -3,-0.2 0.832 142.9 -6.1 -94.6 -41.6 4.9 -7.9 -0.9 55 55 A a T <5S- 0 0 31 -4,-3.0 -3,-0.2 -5,-0.2 -4,-0.1 0.665 92.1-169.6-120.7 -43.5 3.3 -9.4 -4.1 56 56 A A < - 0 0 26 -5,-1.3 2,-0.9 1,-0.1 -3,-0.1 0.326 30.9 -68.1 67.9 166.5 6.2 -9.6 -6.7 57 57 A P 0 0 81 0, 0.0 -1,-0.1 0, 0.0 -28,-0.1 -0.697 360.0 360.0 -96.3 87.2 6.6 -10.4 -10.5 58 58 A V 0 0 166 -2,-0.9 -2,-0.1 -30,-0.1 -29,-0.0 0.551 360.0 360.0-125.5 360.0 5.7 -14.1 -11.4