==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-FEB-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 12-FEB-10 2KU3 . COMPND 2 MOLECULE: BROMODOMAIN-CONTAINING PROTEIN 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.QIN,J.ZHANG,J.WU,Y.SHI . 62 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5109.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 27 43.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 4 6.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 3.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 11.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 3.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 9 14.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A Q 0 0 243 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 160.7 -8.0 17.1 12.8 2 2 A S - 0 0 122 1,-0.5 2,-0.3 2,-0.0 0, 0.0 0.619 360.0 -2.2-123.4 -71.1 -4.8 15.3 11.9 3 3 A L - 0 0 113 1,-0.1 -1,-0.5 2,-0.0 0, 0.0 -0.836 50.5-135.5-126.7 165.3 -4.3 14.6 8.2 4 4 A I - 0 0 158 -2,-0.3 -1,-0.1 -3,-0.1 -2,-0.0 0.949 68.9 -72.3 -83.5 -58.1 -6.3 15.2 5.0 5 5 A D - 0 0 89 4,-0.0 -2,-0.0 2,-0.0 4,-0.0 0.197 42.7-157.8-167.2 -50.6 -5.8 11.9 3.2 6 6 A E S S- 0 0 119 1,-0.2 -3,-0.0 2,-0.1 3,-0.0 0.972 87.2 -30.9 51.1 66.1 -2.3 11.4 1.8 7 7 A D S S+ 0 0 83 1,-0.1 -1,-0.2 19,-0.0 -2,-0.0 0.944 87.7 160.1 59.2 51.7 -3.2 8.7 -0.8 8 8 A A + 0 0 36 2,-0.1 2,-0.4 18,-0.0 -1,-0.1 -0.135 44.9 88.9 -95.4 37.8 -6.1 7.4 1.3 9 9 A V S S- 0 0 91 7,-0.1 24,-0.4 8,-0.1 7,-0.2 -0.991 77.2-120.1-139.4 127.7 -7.8 5.8 -1.7 10 10 A C - 0 0 3 5,-0.8 24,-0.3 -2,-0.4 6,-0.1 -0.191 11.9-153.5 -62.1 154.9 -7.3 2.3 -3.1 11 11 A S S S+ 0 0 78 22,-0.7 23,-0.1 3,-0.2 -1,-0.1 0.728 88.6 55.7-101.9 -30.5 -6.0 1.9 -6.8 12 12 A I S S+ 0 0 86 1,-0.2 22,-0.1 3,-0.1 -1,-0.1 0.852 133.8 8.3 -71.3 -36.2 -7.4 -1.5 -7.7 13 13 A C S S- 0 0 60 2,-0.1 -1,-0.2 0, 0.0 -2,-0.1 0.350 94.0-125.1-125.7 1.2 -11.0 -0.5 -6.8 14 14 A M + 0 0 159 1,-0.2 2,-0.5 -5,-0.1 -3,-0.2 0.825 67.2 134.5 55.6 33.5 -10.7 3.2 -6.2 15 15 A D - 0 0 63 2,-0.1 -5,-0.8 1,-0.0 2,-0.7 -0.959 44.4-164.2-119.2 119.8 -12.2 2.7 -2.7 16 16 A G + 0 0 40 -2,-0.5 2,-0.6 -7,-0.2 -7,-0.1 -0.370 47.8 124.8 -96.8 54.4 -10.7 4.3 0.4 17 17 A E - 0 0 118 -2,-0.7 2,-1.0 5,-0.1 5,-0.1 -0.873 49.4-153.3-118.2 98.6 -12.5 2.2 2.9 18 18 A S + 0 0 87 -2,-0.6 2,-0.3 5,-0.1 5,-0.3 -0.577 32.2 161.9 -73.0 102.1 -10.2 0.4 5.4 19 19 A Q - 0 0 124 3,-2.6 -2,-0.0 -2,-1.0 0, 0.0 -0.803 51.2-112.7-120.7 162.4 -12.2 -2.7 6.4 20 20 A N S S+ 0 0 147 -2,-0.3 3,-0.5 1,-0.2 -1,-0.1 0.948 119.7 43.5 -57.6 -52.4 -11.2 -6.0 8.0 21 21 A S S S+ 0 0 84 1,-0.3 2,-0.4 -3,-0.0 -1,-0.2 0.882 132.7 23.7 -61.0 -39.1 -12.1 -8.0 4.9 22 22 A N S S- 0 0 50 -5,-0.1 -3,-2.6 14,-0.1 2,-0.6 -0.808 76.1-174.0-132.7 92.1 -10.3 -5.4 2.8 23 23 A V - 0 0 23 -3,-0.5 13,-1.9 -2,-0.4 2,-1.1 -0.774 25.2-132.6 -90.2 118.6 -7.7 -3.4 4.6 24 24 A I E -A 35 0A 15 -2,-0.6 11,-0.3 11,-0.3 2,-0.2 -0.564 28.7-157.6 -72.7 98.4 -6.2 -0.6 2.5 25 25 A L E -A 34 0A 22 9,-1.6 9,-2.2 -2,-1.1 2,-0.4 -0.552 4.4-138.1 -81.3 143.2 -2.5 -1.0 3.1 26 26 A F E -A 33 0A 69 -2,-0.2 23,-1.0 7,-0.2 7,-0.2 -0.798 17.0-123.2-102.7 142.4 -0.1 1.9 2.5 27 27 A C - 0 0 7 5,-1.6 23,-0.2 -2,-0.4 -1,-0.1 0.134 9.7-131.8 -67.4-170.3 3.3 1.5 0.9 28 28 A D S S+ 0 0 80 21,-0.5 22,-0.1 20,-0.1 -1,-0.1 0.607 94.5 17.9-118.4 -27.0 6.7 2.5 2.4 29 29 A M S S+ 0 0 147 20,-0.3 21,-0.1 3,-0.1 -2,-0.0 0.780 136.0 25.7-110.2 -66.5 8.3 4.5 -0.4 30 30 A C S S- 0 0 67 2,-0.0 20,-0.1 21,-0.0 -4,-0.0 0.784 95.2-131.5 -73.0 -28.3 5.8 5.7 -3.0 31 31 A N + 0 0 59 1,-0.2 2,-0.1 18,-0.2 19,-0.1 0.723 40.1 173.2 82.2 25.5 2.9 5.6 -0.5 32 32 A L - 0 0 57 -6,-0.1 -5,-1.6 17,-0.1 2,-0.5 -0.398 21.0-145.4 -66.6 139.6 0.5 3.7 -2.7 33 33 A A E +A 26 0A 3 -24,-0.4 -22,-0.7 -7,-0.2 2,-0.3 -0.939 32.5 146.0-113.7 124.3 -2.7 2.6 -1.1 34 34 A V E -A 25 0A 3 -9,-2.2 -9,-1.6 -2,-0.5 -11,-0.1 -0.952 50.1-104.3-157.0 134.6 -4.4 -0.7 -2.0 35 35 A H E >> -A 24 0A 6 -2,-0.3 4,-2.5 -11,-0.3 3,-0.5 -0.306 29.0-127.4 -58.1 137.6 -6.4 -3.3 -0.1 36 36 A Q H 3>>S+ 0 0 8 -13,-1.9 5,-3.5 1,-0.3 4,-0.9 0.743 115.0 47.5 -59.1 -21.4 -4.4 -6.4 0.6 37 37 A E H 345S+ 0 0 109 3,-0.2 -1,-0.3 2,-0.2 -15,-0.1 0.728 109.1 53.6 -89.1 -25.9 -7.3 -8.3 -1.0 38 38 A C H <45S+ 0 0 30 -3,-0.5 -2,-0.2 1,-0.2 -1,-0.1 0.864 113.5 41.5 -74.6 -39.7 -7.4 -6.0 -3.9 39 39 A Y H <5S- 0 0 94 -4,-2.5 -2,-0.2 2,-0.1 -1,-0.2 0.813 120.4-105.9 -78.1 -32.6 -3.7 -6.4 -4.7 40 40 A G T <5 + 0 0 61 -4,-0.9 -3,-0.2 -5,-0.3 -4,-0.1 0.692 67.5 145.0 110.7 30.4 -3.7 -10.2 -4.1 41 41 A V < - 0 0 35 -5,-3.5 -1,-0.3 -6,-0.2 -2,-0.1 -0.823 52.6-130.5-102.1 137.8 -2.0 -10.5 -0.7 42 42 A P S S- 0 0 115 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 0.920 74.7 -48.3 -48.8 -53.7 -3.0 -13.1 1.9 43 43 A Y S S- 0 0 147 -7,-0.1 -21,-0.0 -3,-0.1 0, 0.0 -0.902 84.1 -36.8-164.7-169.8 -3.3 -10.6 4.8 44 44 A I - 0 0 82 -2,-0.3 4,-0.1 1,-0.1 5,-0.0 -0.499 61.0-136.7 -68.9 126.2 -1.5 -7.8 6.6 45 45 A P - 0 0 47 0, 0.0 -1,-0.1 0, 0.0 4,-0.1 -0.077 22.1-101.7 -74.6 178.8 2.3 -8.3 6.8 46 46 A E S S+ 0 0 183 2,-0.0 -2,-0.0 0, 0.0 0, 0.0 0.979 104.2 16.9 -66.9 -58.5 4.6 -7.7 9.8 47 47 A G S S- 0 0 61 1,-0.2 2,-0.1 0, 0.0 0, 0.0 0.515 109.9 -56.7 -85.8-128.2 6.1 -4.4 8.7 48 48 A Q - 0 0 121 -4,-0.1 2,-0.4 -23,-0.1 -1,-0.2 -0.060 60.1 -83.8-100.8-155.9 4.7 -2.1 6.0 49 49 A W - 0 0 20 -23,-1.0 -21,-0.5 -22,-0.1 2,-0.4 -0.935 28.6-169.0-120.6 142.9 3.8 -2.6 2.3 50 50 A L - 0 0 33 -2,-0.4 5,-0.1 -23,-0.2 -23,-0.1 -0.910 16.5-144.6-133.2 105.6 6.1 -2.4 -0.7 51 51 A C > - 0 0 9 -2,-0.4 4,-3.4 1,-0.1 5,-0.5 -0.047 39.4 -92.0 -59.6 167.8 4.6 -2.4 -4.2 52 52 A R H > S+ 0 0 178 1,-0.3 4,-0.9 2,-0.2 -1,-0.1 0.771 133.4 44.6 -55.1 -25.8 6.3 -4.2 -7.1 53 53 A H H > S+ 0 0 138 2,-0.2 4,-1.0 3,-0.1 -1,-0.3 0.759 115.1 49.1 -86.7 -29.0 8.0 -0.9 -7.9 54 54 A C H > S+ 0 0 5 -3,-0.4 4,-2.0 2,-0.2 5,-0.3 0.956 115.5 39.6 -73.7 -55.9 8.7 -0.2 -4.2 55 55 A L H X S+ 0 0 81 -4,-3.4 4,-2.4 1,-0.2 -3,-0.2 0.894 115.2 54.0 -62.7 -41.0 10.3 -3.6 -3.4 56 56 A Q H X S+ 0 0 134 -4,-0.9 4,-0.9 -5,-0.5 -1,-0.2 0.843 107.6 52.5 -62.4 -34.3 12.1 -3.7 -6.8 57 57 A S H >< S+ 0 0 78 -4,-1.0 3,-0.6 1,-0.2 -2,-0.2 0.962 118.0 33.7 -66.2 -54.0 13.6 -0.3 -6.0 58 58 A R H 3X S+ 0 0 138 -4,-2.0 4,-2.4 1,-0.2 -2,-0.2 0.716 107.0 72.3 -74.9 -21.7 15.0 -1.2 -2.5 59 59 A A H 3< S+ 0 0 56 -4,-2.4 -1,-0.2 -5,-0.3 -2,-0.2 0.817 88.6 64.2 -62.5 -31.0 15.7 -4.8 -3.8 60 60 A R T << S+ 0 0 214 -4,-0.9 -1,-0.2 -3,-0.6 -2,-0.2 0.982 114.3 26.5 -56.6 -64.2 18.6 -3.4 -5.9 61 61 A P T 4 0 0 99 0, 0.0 -2,-0.2 0, 0.0 -1,-0.2 0.927 360.0 360.0 -66.5 -46.9 20.8 -2.2 -3.0 62 62 A A < 0 0 122 -4,-2.4 -2,-0.1 0, 0.0 -3,-0.1 -0.167 360.0 360.0 55.5 360.0 19.5 -4.7 -0.4