==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DE NOVO PROTEIN 25-JAN-02 1KVF . COMPND 2 MOLECULE: PROTEIN: EMP-18 RECEPTOR AGONIST; . SOURCE 2 SYNTHETIC: YES; . AUTHOR N.J.SKELTON,S.RUSSELL,F.DE SAUVAGE,A.G.COCHRAN . 16 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1655.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 9 56.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 31.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 6.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 25.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A T 0 0 161 0, 0.0 15,-0.1 0, 0.0 2,-0.0 0.000 360.0 360.0 360.0 -64.1 -8.3 -1.7 -3.6 2 2 A Y - 0 0 146 14,-0.2 2,-1.0 13,-0.1 11,-0.0 -0.280 360.0-120.4 -74.0 159.3 -5.7 -1.0 -6.4 3 3 A S E +A 14 0A 39 11,-2.5 11,-1.5 2,-0.0 2,-0.7 -0.632 56.3 148.1 -99.4 68.6 -2.0 -1.7 -6.2 4 4 A a E +A 13 0A 43 -2,-1.0 2,-0.3 9,-0.3 9,-0.2 -0.881 24.7 126.2-111.6 91.4 -1.0 1.9 -6.7 5 5 A H E -A 12 0A 76 7,-2.1 7,-2.4 -2,-0.7 2,-0.7 -0.886 67.3 -93.2-140.9 164.1 2.3 2.3 -4.7 6 6 A F E S+A 11 0A 148 -2,-0.3 5,-0.3 5,-0.2 4,-0.1 -0.817 70.3 151.8 -85.0 113.5 5.9 3.5 -5.0 7 7 A G - 0 0 10 3,-1.8 -2,-0.2 -2,-0.7 2,-0.2 -0.625 34.0 -2.8 151.3 156.4 7.9 0.3 -5.9 8 8 A P S S- 0 0 128 0, 0.0 3,-0.1 0, 0.0 -2,-0.1 -0.791 122.4 -36.8 -78.2 -46.3 9.9 -1.7 -6.8 9 9 A L S S+ 0 0 145 -2,-0.2 2,-0.1 1,-0.1 3,-0.1 0.841 130.5 14.5-100.0 -60.2 12.0 0.9 -8.7 10 10 A T S S- 0 0 90 1,-0.2 -3,-1.8 -3,-0.1 2,-0.2 -0.328 103.7 -67.6 -99.7-174.6 9.4 3.3 -10.1 11 11 A W E -A 6 0A 156 -5,-0.3 2,-0.4 -2,-0.1 -5,-0.2 -0.559 47.1-163.2 -73.1 144.6 5.7 3.8 -9.3 12 12 A V E -A 5 0A 43 -7,-2.4 -7,-2.1 -2,-0.2 2,-0.3 -0.996 9.0-178.1-131.4 133.7 3.4 0.8 -10.2 13 13 A a E +A 4 0A 74 -2,-0.4 -9,-0.3 -9,-0.2 -2,-0.0 -0.801 5.1 172.5-140.1 91.4 -0.4 1.2 -10.4 14 14 A K E -A 3 0A 134 -11,-1.5 -11,-2.5 -2,-0.3 2,-1.7 -0.904 31.7-135.4 -99.8 119.2 -2.4 -1.9 -11.3 15 15 A P 0 0 93 0, 0.0 -13,-0.1 0, 0.0 -2,-0.0 -0.569 360.0 360.0 -79.1 84.5 -6.2 -1.4 -11.0 16 16 A Q 0 0 169 -2,-1.7 -14,-0.2 -15,-0.1 -3,-0.0 0.982 360.0 360.0 -63.0 360.0 -7.0 -4.6 -9.1