==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-JAN-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GENE REGULATION 04-MAR-10 2KV2 . COMPND 2 MOLECULE: BLOOM SYNDROME PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR Y.M.KIM,B.-S.CHOI . 85 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6525.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 63 74.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 9.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 50 58.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A Q >> 0 0 165 0, 0.0 4,-1.4 0, 0.0 3,-0.9 0.000 360.0 360.0 360.0 26.3 2.1 0.0 -1.2 2 2 A R H 3> + 0 0 186 1,-0.3 4,-2.6 2,-0.2 5,-0.2 0.890 360.0 60.6 -55.6 -41.9 -1.1 -0.0 -3.4 3 3 A E H 3> S+ 0 0 125 1,-0.2 4,-3.0 2,-0.2 -1,-0.3 0.845 101.1 55.5 -55.0 -35.3 0.5 2.6 -5.6 4 4 A E H <> S+ 0 0 122 -3,-0.9 4,-2.4 2,-0.2 -1,-0.2 0.928 109.0 45.0 -64.4 -46.8 3.2 0.2 -6.4 5 5 A M H X S+ 0 0 68 -4,-1.4 4,-2.4 2,-0.2 -2,-0.2 0.911 117.0 45.4 -63.8 -43.7 0.8 -2.5 -7.6 6 6 A V H X S+ 0 0 33 -4,-2.6 4,-2.6 2,-0.2 5,-0.2 0.931 113.4 48.9 -65.9 -47.0 -1.2 -0.1 -9.6 7 7 A K H X S+ 0 0 142 -4,-3.0 4,-2.5 -5,-0.2 -2,-0.2 0.915 114.1 46.3 -59.2 -45.2 1.9 1.6 -11.2 8 8 A K H X S+ 0 0 101 -4,-2.4 4,-2.4 -5,-0.2 5,-0.2 0.920 111.3 52.1 -64.3 -45.1 3.3 -1.8 -12.1 9 9 A C H X S+ 0 0 12 -4,-2.4 4,-2.4 1,-0.2 -2,-0.2 0.942 113.2 43.6 -56.8 -51.3 0.0 -3.1 -13.5 10 10 A L H X S+ 0 0 58 -4,-2.6 4,-2.2 1,-0.2 -1,-0.2 0.918 111.6 54.5 -61.6 -45.1 -0.3 -0.0 -15.7 11 11 A G H X S+ 0 0 38 -4,-2.5 4,-1.4 -5,-0.2 -1,-0.2 0.902 113.1 41.6 -56.1 -44.2 3.3 -0.1 -16.8 12 12 A E H X S+ 0 0 86 -4,-2.4 4,-2.3 1,-0.2 -1,-0.2 0.853 112.0 55.3 -72.2 -35.8 3.0 -3.7 -17.9 13 13 A L H X S+ 0 0 15 -4,-2.4 4,-2.7 -5,-0.2 5,-0.2 0.827 104.2 56.0 -66.1 -31.9 -0.4 -3.1 -19.5 14 14 A T H X S+ 0 0 76 -4,-2.2 4,-1.8 2,-0.2 -1,-0.2 0.940 111.7 40.2 -65.8 -48.9 1.1 -0.3 -21.6 15 15 A E H X S+ 0 0 108 -4,-1.4 4,-2.5 2,-0.2 5,-0.3 0.883 117.5 49.9 -67.8 -39.3 3.8 -2.5 -23.1 16 16 A V H X S+ 0 0 33 -4,-2.3 4,-2.3 1,-0.2 5,-0.2 0.935 116.0 40.5 -64.9 -47.9 1.4 -5.4 -23.6 17 17 A C H X S+ 0 0 10 -4,-2.7 4,-2.1 2,-0.2 -1,-0.2 0.790 114.7 55.2 -71.2 -28.3 -1.3 -3.3 -25.3 18 18 A K H X S+ 0 0 113 -4,-1.8 4,-1.9 -5,-0.2 -2,-0.2 0.934 113.4 38.4 -70.0 -47.8 1.4 -1.5 -27.2 19 19 A S H X S+ 0 0 76 -4,-2.5 4,-2.5 2,-0.2 5,-0.3 0.923 121.6 44.1 -69.3 -45.7 3.0 -4.6 -28.7 20 20 A L H X S+ 0 0 56 -4,-2.3 4,-2.2 -5,-0.3 -2,-0.2 0.892 117.1 46.2 -66.6 -40.7 -0.4 -6.3 -29.2 21 21 A G H X>S+ 0 0 1 -4,-2.1 5,-3.0 -5,-0.2 4,-0.5 0.829 114.0 48.7 -71.6 -32.2 -2.0 -3.2 -30.6 22 22 A K H <5S+ 0 0 164 -4,-1.9 3,-0.4 3,-0.2 -2,-0.2 0.926 117.2 39.6 -72.9 -46.8 0.9 -2.5 -32.9 23 23 A V H <5S+ 0 0 105 -4,-2.5 -2,-0.2 1,-0.2 -3,-0.2 0.883 110.0 59.7 -70.1 -39.5 1.2 -6.0 -34.3 24 24 A F H <5S- 0 0 115 -4,-2.2 -1,-0.2 -5,-0.3 -2,-0.2 0.722 119.2-111.9 -61.7 -20.5 -2.6 -6.4 -34.5 25 25 A G T <5S+ 0 0 61 -4,-0.5 2,-0.2 -3,-0.4 -3,-0.2 0.858 80.3 92.8 90.1 41.0 -2.6 -3.3 -36.8 26 26 A V S > - 0 0 141 -2,-0.2 3,-1.3 1,-0.1 4,-1.0 -0.752 30.3-117.4-107.8 155.3 -3.7 1.9 -32.0 28 28 A Y H >> S+ 0 0 125 -2,-0.3 4,-2.9 1,-0.3 3,-0.6 0.870 119.9 50.6 -55.6 -38.6 -3.6 1.7 -28.2 29 29 A F H 34 S+ 0 0 116 1,-0.2 -1,-0.3 2,-0.2 5,-0.0 0.657 105.7 57.8 -74.1 -15.7 -6.6 4.1 -28.1 30 30 A N H <4 S+ 0 0 120 -3,-1.3 -1,-0.2 1,-0.1 -2,-0.2 0.647 117.2 31.8 -87.3 -17.4 -8.3 1.8 -30.6 31 31 A I H << S+ 0 0 6 -4,-1.0 2,-0.3 -3,-0.6 -2,-0.2 0.728 133.4 8.6-107.1 -35.2 -8.0 -1.2 -28.3 32 32 A F < - 0 0 16 -4,-2.9 -1,-0.4 -5,-0.2 2,-0.2 -0.997 65.3-140.5-150.0 145.8 -8.2 0.4 -24.9 33 33 A N > - 0 0 55 -2,-0.3 4,-2.6 23,-0.1 5,-0.3 -0.665 32.5-107.4-105.0 161.6 -9.0 3.9 -23.5 34 34 A T H > S+ 0 0 82 -2,-0.2 4,-2.4 1,-0.2 5,-0.1 0.877 121.9 50.1 -52.2 -41.2 -7.4 5.8 -20.6 35 35 A V H > S+ 0 0 67 2,-0.2 4,-2.5 1,-0.2 5,-0.3 0.936 109.4 49.7 -64.2 -48.2 -10.5 5.1 -18.5 36 36 A T H > S+ 0 0 3 1,-0.2 4,-2.2 2,-0.2 -2,-0.2 0.933 114.0 45.0 -56.7 -49.6 -10.5 1.4 -19.3 37 37 A L H X S+ 0 0 33 -4,-2.6 4,-2.6 2,-0.2 5,-0.3 0.918 110.5 54.9 -61.5 -45.2 -6.9 1.0 -18.3 38 38 A K H X S+ 0 0 123 -4,-2.4 4,-2.3 -5,-0.3 -2,-0.2 0.933 112.3 42.2 -54.0 -50.6 -7.3 3.2 -15.2 39 39 A K H X S+ 0 0 91 -4,-2.5 4,-2.8 2,-0.2 5,-0.3 0.862 111.0 58.5 -65.6 -36.5 -10.1 0.9 -13.9 40 40 A L H X S+ 0 0 12 -4,-2.2 4,-2.6 -5,-0.3 5,-0.3 0.964 113.6 35.3 -57.5 -56.3 -8.2 -2.2 -15.0 41 41 A A H < S+ 0 0 0 -4,-2.6 -1,-0.2 1,-0.2 -2,-0.2 0.853 115.7 57.9 -67.1 -35.5 -5.2 -1.4 -12.8 42 42 A E H < S+ 0 0 117 -4,-2.3 -2,-0.2 -5,-0.3 -1,-0.2 0.920 113.1 38.2 -60.8 -45.7 -7.4 0.1 -10.1 43 43 A S H < S- 0 0 44 -4,-2.8 -2,-0.2 -5,-0.1 -1,-0.2 0.945 84.5-172.1 -71.1 -50.1 -9.4 -3.1 -9.7 44 44 A L < + 0 0 27 -4,-2.6 2,-0.3 -5,-0.3 -3,-0.1 0.978 30.7 133.0 51.7 77.7 -6.4 -5.5 -10.1 45 45 A S - 0 0 30 -5,-0.3 -1,-0.2 1,-0.1 29,-0.1 -0.950 57.0-143.3-158.9 135.1 -8.2 -8.8 -10.3 46 46 A S S S+ 0 0 7 -2,-0.3 -1,-0.1 27,-0.3 28,-0.1 0.895 74.0 105.8 -64.5 -41.2 -8.0 -11.9 -12.5 47 47 A D >> - 0 0 102 1,-0.2 4,-0.9 26,-0.1 3,-0.6 -0.181 58.1-161.5 -45.5 105.7 -11.8 -12.4 -12.3 48 48 A P H 3> S+ 0 0 46 0, 0.0 4,-1.8 0, 0.0 -1,-0.2 0.561 79.8 78.5 -69.7 -7.7 -12.9 -11.2 -15.8 49 49 A E H 3> S+ 0 0 149 2,-0.2 4,-0.5 1,-0.2 -2,-0.1 0.943 96.5 40.5 -66.6 -49.5 -16.4 -10.9 -14.4 50 50 A V H X4 S+ 0 0 51 -3,-0.6 3,-0.7 1,-0.2 -1,-0.2 0.837 114.3 54.6 -68.4 -33.5 -15.7 -7.6 -12.7 51 51 A L H >< S+ 0 0 16 -4,-0.9 3,-2.7 1,-0.2 -1,-0.2 0.861 96.6 64.5 -68.3 -36.3 -13.6 -6.3 -15.6 52 52 A L H 3< S+ 0 0 99 -4,-1.8 -1,-0.2 1,-0.3 5,-0.2 0.751 94.0 62.7 -58.7 -23.5 -16.5 -7.0 -18.0 53 53 A Q T << S+ 0 0 145 -3,-0.7 2,-0.5 -4,-0.5 -1,-0.3 0.449 84.6 99.5 -81.4 -0.3 -18.4 -4.3 -16.1 54 54 A I S < S- 0 0 6 -3,-2.7 3,-0.2 1,-0.1 -18,-0.1 -0.784 87.4-109.0 -92.9 124.7 -15.7 -1.8 -17.2 55 55 A D S S+ 0 0 97 -2,-0.5 -2,-0.1 1,-0.2 -1,-0.1 -0.270 104.4 33.7 -52.0 120.7 -16.6 0.3 -20.2 56 56 A G S S+ 0 0 34 1,-0.3 2,-0.4 -4,-0.1 -1,-0.2 0.833 87.6 121.7 98.5 42.9 -14.5 -0.9 -23.1 57 57 A V + 0 0 23 -5,-0.2 2,-0.3 -3,-0.2 -1,-0.3 -0.983 28.9 168.7-141.6 127.3 -14.3 -4.6 -22.5 58 58 A T > - 0 0 66 -2,-0.4 4,-3.2 1,-0.1 5,-0.4 -0.902 47.2-108.0-134.0 162.5 -15.4 -7.5 -24.7 59 59 A E H > S+ 0 0 151 -2,-0.3 4,-1.5 1,-0.2 5,-0.1 0.893 122.4 45.6 -54.9 -42.6 -15.0 -11.3 -24.8 60 60 A D H > S+ 0 0 84 2,-0.2 4,-1.9 1,-0.2 5,-0.2 0.921 113.5 48.8 -67.7 -45.4 -12.7 -10.9 -27.8 61 61 A K H >>S+ 0 0 45 1,-0.2 4,-3.1 2,-0.2 5,-1.3 0.944 116.8 41.0 -59.9 -50.4 -10.7 -8.1 -26.2 62 62 A L H <>S+ 0 0 39 -4,-3.2 5,-1.1 3,-0.2 -1,-0.2 0.774 112.9 56.9 -69.2 -26.2 -10.2 -9.9 -22.9 63 63 A E H <5S+ 0 0 127 -4,-1.5 -1,-0.2 -5,-0.4 -2,-0.2 0.823 117.2 33.0 -73.8 -32.2 -9.6 -13.1 -24.9 64 64 A K H <5S+ 0 0 104 -4,-1.9 4,-0.3 -3,-0.2 -2,-0.2 0.909 145.4 5.2 -88.3 -52.0 -6.7 -11.5 -26.8 65 65 A Y T >X5S+ 0 0 14 -4,-3.1 4,-1.6 -5,-0.2 3,-1.2 0.852 121.8 65.8 -98.9 -51.5 -5.3 -9.1 -24.2 66 66 A G H 3> S+ 0 0 101 -3,-1.2 4,-2.4 -4,-0.3 5,-0.3 0.866 112.9 56.4 -60.5 -37.3 -2.2 -11.9 -20.2 69 69 A V H X S+ 0 0 12 -4,-1.6 4,-2.1 1,-0.2 -1,-0.2 0.900 110.2 43.8 -61.9 -42.2 -3.9 -9.6 -17.7 70 70 A I H X S+ 0 0 47 -4,-2.8 4,-1.9 -5,-0.2 -2,-0.2 0.877 111.1 54.9 -70.8 -38.8 -5.5 -12.6 -15.9 71 71 A S H X S+ 0 0 54 -4,-2.3 4,-2.1 -5,-0.3 -2,-0.2 0.939 114.1 39.5 -60.0 -49.5 -2.3 -14.6 -16.1 72 72 A V H X S+ 0 0 54 -4,-2.4 4,-2.5 1,-0.2 5,-0.4 0.889 114.4 53.6 -68.1 -40.5 -0.3 -11.9 -14.4 73 73 A L H X S+ 0 0 5 -4,-2.1 4,-0.6 -5,-0.3 -27,-0.3 0.803 114.1 43.3 -64.5 -29.1 -3.1 -11.1 -11.9 74 74 A Q H X S+ 0 0 91 -4,-1.9 4,-1.5 2,-0.2 -2,-0.2 0.812 112.5 52.5 -85.0 -33.8 -3.2 -14.7 -11.0 75 75 A K H X S+ 0 0 156 -4,-2.1 4,-0.8 -5,-0.2 3,-0.4 0.968 115.2 38.4 -66.2 -55.1 0.5 -15.2 -10.8 76 76 A Y H X S+ 0 0 70 -4,-2.5 4,-1.0 1,-0.2 3,-0.3 0.782 110.8 63.6 -66.8 -26.8 1.2 -12.2 -8.4 77 77 A S H >< S+ 0 0 34 -4,-0.6 3,-0.5 -5,-0.4 -1,-0.2 0.887 95.6 57.2 -64.7 -40.1 -2.0 -13.1 -6.6 78 78 A E H 3< S+ 0 0 161 -4,-1.5 -1,-0.2 -3,-0.4 -2,-0.2 0.815 100.1 60.1 -60.8 -30.7 -0.6 -16.5 -5.5 79 79 A W H 3< S+ 0 0 230 -4,-0.8 2,-0.3 -3,-0.3 -1,-0.2 0.872 101.2 62.7 -65.5 -37.8 2.3 -14.6 -3.9 80 80 A T << + 0 0 72 -4,-1.0 0, 0.0 -3,-0.5 0, 0.0 -0.649 57.0 178.0 -91.8 147.5 -0.1 -12.8 -1.6 81 81 A S - 0 0 109 -2,-0.3 2,-0.1 2,-0.0 -3,-0.1 -0.507 9.9-173.2-149.5 72.9 -2.3 -14.5 1.0 82 82 A P - 0 0 90 0, 0.0 2,-0.9 0, 0.0 -2,-0.0 -0.381 39.4 -97.8 -69.7 144.9 -4.4 -12.0 3.0 83 83 A A + 0 0 94 1,-0.2 -2,-0.0 -2,-0.1 0, 0.0 -0.501 53.7 159.5 -67.0 102.3 -6.5 -13.3 6.0 84 84 A E 0 0 182 -2,-0.9 -1,-0.2 1,-0.1 0, 0.0 -0.001 360.0 360.0-113.4 26.2 -9.9 -13.7 4.5 85 85 A D 0 0 192 0, 0.0 -2,-0.1 0, 0.0 -1,-0.1 0.755 360.0 360.0-112.7 360.0 -11.2 -16.1 7.1