==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=23-JUL-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN TRANSPORT 09-MAR-10 2KV7 . COMPND 2 MOLECULE: PROTEIN PRGI; . SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM; . AUTHOR H.SCHMIDT,O.POYRAZ,K.SEIDEL,F.DELISSEN,C.ADER,H.TENENBOIM,C. . 83 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6431.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 75 90.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 9.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 56 67.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 6 7.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 130 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-128.5 22.3 7.4 -25.3 2 2 A S - 0 0 95 0, 0.0 2,-0.7 0, 0.0 3,-0.2 -0.830 360.0-103.2-135.9 175.5 19.4 4.9 -24.8 3 3 A H S S- 0 0 185 -2,-0.3 3,-0.0 1,-0.2 0, 0.0 -0.860 91.8 -30.6-107.3 106.1 15.8 4.8 -23.4 4 4 A M S S+ 0 0 125 -2,-0.7 -1,-0.2 1,-0.1 9,-0.0 0.984 105.5 112.4 52.9 70.3 15.7 3.2 -20.0 5 5 A A + 0 0 65 -3,-0.2 -1,-0.1 2,-0.1 -2,-0.0 -0.280 31.5 141.9-169.1 72.5 18.6 0.7 -20.4 6 6 A T > - 0 0 76 1,-0.1 3,-0.8 -4,-0.0 4,-0.4 -0.891 49.3-105.7-120.7 152.6 21.7 1.4 -18.2 7 7 A P T 3 S+ 0 0 61 0, 0.0 69,-0.1 0, 0.0 -1,-0.1 -0.149 100.8 13.6 -67.3 167.6 24.1 -1.1 -16.5 8 8 A W T 3 S+ 0 0 185 67,-0.2 3,-0.1 1,-0.1 64,-0.1 0.787 102.0 112.9 32.9 39.0 23.9 -1.6 -12.7 9 9 A S < + 0 0 12 -3,-0.8 2,-3.1 1,-0.1 3,-0.4 0.777 13.7 128.9 -99.4 -86.9 20.6 0.3 -12.7 10 10 A G S >S+ 0 0 0 -4,-0.4 5,-3.5 1,-0.3 6,-0.6 -0.322 92.5 32.4 66.0 -73.4 17.5 -1.8 -11.8 11 11 A Y T 5S+ 0 0 108 -2,-3.1 -1,-0.3 3,-0.2 -2,-0.1 0.651 98.8 84.0 -88.2 -15.0 16.3 0.7 -9.3 12 12 A L T 5S- 0 0 113 -3,-0.4 -1,-0.2 1,-0.1 -2,-0.1 0.815 130.7 -40.3 -58.3 -25.9 17.6 3.7 -11.2 13 13 A D T >5S+ 0 0 77 -3,-0.4 4,-1.7 -9,-0.0 5,-0.2 0.256 129.4 74.1-169.1 -39.1 14.4 3.6 -13.2 14 14 A D H >>5S+ 0 0 51 2,-0.2 3,-1.4 1,-0.2 4,-1.1 0.980 109.6 28.0 -53.8 -79.3 13.4 -0.0 -14.0 15 15 A V H >>>S+ 0 0 31 -6,-0.6 4,-1.2 1,-0.3 5,-0.8 0.863 98.0 55.3 -54.1 -34.0 11.1 2.3 -9.8 17 17 A A H <<>S+ 0 0 37 -4,-1.7 5,-1.7 -3,-1.4 -1,-0.3 0.898 116.1 36.6 -68.2 -35.6 8.6 2.2 -12.6 18 18 A K H <<>S+ 0 0 128 -4,-1.1 5,-0.8 -3,-0.6 -2,-0.2 0.752 127.8 38.9 -86.1 -24.2 7.0 -0.9 -11.1 19 19 A F H X>S+ 0 0 51 -4,-3.2 4,-1.5 -5,-0.2 5,-1.0 0.930 126.0 27.3 -88.3 -71.1 7.6 0.3 -7.5 20 20 A D H X5S+ 0 0 97 -4,-1.2 4,-2.9 3,-0.2 5,-0.5 0.974 138.2 24.1 -56.0 -81.3 6.9 4.1 -7.6 21 21 A T H > - 0 0 49 -2,-1.1 4,-0.6 -3,-0.4 5,-0.2 -0.804 41.6-143.9-113.0 156.1 -23.0 -2.1 -4.7 44 44 A P H > S+ 0 0 105 0, 0.0 4,-1.5 0, 0.0 -1,-0.1 0.863 99.6 41.3 -80.3 -43.4 -21.3 -5.4 -5.7 45 45 A A H > S+ 0 0 62 2,-0.2 4,-2.7 3,-0.2 5,-0.2 0.973 113.4 48.5 -73.5 -57.2 -19.0 -4.0 -8.3 46 46 A L H > S+ 0 0 27 2,-0.2 4,-2.2 1,-0.2 3,-0.3 0.966 118.9 40.1 -49.0 -60.2 -17.8 -0.7 -6.7 47 47 A L H X S+ 0 0 71 -4,-0.6 4,-2.5 1,-0.3 5,-0.3 0.962 116.3 50.6 -55.1 -51.0 -17.0 -2.5 -3.4 48 48 A A H X S+ 0 0 48 -4,-1.5 4,-3.1 -5,-0.2 -1,-0.3 0.837 108.1 57.2 -56.6 -30.3 -15.6 -5.5 -5.3 49 49 A A H X S+ 0 0 31 -4,-2.7 4,-2.5 -3,-0.3 5,-0.3 0.993 107.2 42.3 -67.2 -60.4 -13.5 -2.9 -7.2 50 50 A Y H X S+ 0 0 59 -4,-2.2 4,-1.9 -17,-0.3 -2,-0.2 0.906 119.7 47.2 -54.8 -37.6 -11.7 -1.3 -4.3 51 51 A Q H X S+ 0 0 100 -4,-2.5 4,-2.7 -5,-0.3 5,-0.4 0.961 106.6 56.0 -68.7 -48.1 -11.2 -4.8 -2.8 52 52 A S H X S+ 0 0 71 -4,-3.1 4,-1.3 -5,-0.3 -2,-0.2 0.917 113.4 41.9 -49.7 -43.0 -10.0 -6.2 -6.2 53 53 A K H X S+ 0 0 61 -4,-2.5 4,-2.2 2,-0.2 -1,-0.3 0.857 113.6 55.7 -73.1 -32.5 -7.3 -3.5 -6.1 54 54 A L H X S+ 0 0 56 -4,-1.9 4,-2.9 -5,-0.3 3,-0.5 0.998 106.9 45.1 -62.7 -65.3 -6.8 -4.1 -2.4 55 55 A S H X S+ 0 0 88 -4,-2.7 4,-1.3 1,-0.3 -1,-0.2 0.865 118.5 46.4 -48.6 -36.2 -6.0 -7.9 -2.6 56 56 A E H X S+ 0 0 118 -4,-1.3 4,-1.5 -5,-0.4 -1,-0.3 0.854 115.1 47.0 -76.0 -33.2 -3.7 -7.0 -5.6 57 57 A Y H X S+ 0 0 28 -4,-2.2 4,-2.1 -3,-0.5 -2,-0.2 0.972 109.9 48.9 -73.5 -55.3 -2.1 -4.1 -3.7 58 58 A N H X S+ 0 0 85 -4,-2.9 4,-0.8 1,-0.3 -2,-0.2 0.929 118.0 43.3 -52.0 -41.8 -1.4 -5.9 -0.4 59 59 A L H >X S+ 0 0 96 -4,-1.3 4,-3.2 -5,-0.4 3,-0.5 0.881 105.3 66.5 -70.8 -34.4 0.1 -8.7 -2.4 60 60 A Y H 3X>S+ 0 0 57 -4,-1.5 4,-2.0 1,-0.2 5,-0.7 0.952 93.0 58.2 -49.6 -55.8 1.8 -6.0 -4.5 61 61 A R H 3X5S+ 0 0 143 -4,-2.1 4,-0.6 1,-0.2 -1,-0.2 0.877 116.0 35.9 -44.8 -42.7 4.0 -4.9 -1.6 62 62 A N H X5S+ 0 0 34 -4,-3.2 4,-3.0 1,-0.2 3,-1.0 0.976 114.1 44.7 -51.4 -66.4 5.5 -9.4 -5.0 64 64 A Q H 3X5S+ 0 0 25 -4,-2.0 4,-2.1 1,-0.3 -1,-0.2 0.849 115.1 51.8 -49.6 -32.8 7.2 -6.2 -6.2 65 65 A S H 3XX S+ 0 0 100 -4,-1.6 3,-1.1 -5,-0.3 4,-0.6 0.956 96.7 57.9 -69.6 -48.8 20.4 -9.2 -9.7 74 74 A I H >X S+ 0 0 78 -4,-2.5 3,-1.8 1,-0.3 4,-0.9 0.898 101.3 57.9 -49.3 -41.9 20.0 -10.5 -13.4 75 75 A D H >X S+ 0 0 36 -4,-1.2 3,-1.0 1,-0.3 4,-0.7 0.893 92.3 68.8 -57.7 -37.3 21.7 -7.3 -14.6 76 76 A A H