==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-JAN-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HORMONE 12-MAR-10 2KVE . COMPND 2 MOLECULE: MESENCEPHALIC ASTROCYTE-DERIVED NEUROTROPHIC FACT . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR M.H.HELLMAN,M.SAARMA,P.PERMI . 65 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5955.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 35 53.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 12.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 24 36.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 94 A M 0 0 208 0, 0.0 2,-0.3 0, 0.0 4,-0.0 0.000 360.0 360.0 360.0 145.6 18.7 -19.8 -0.5 2 95 A G + 0 0 52 2,-0.1 2,-0.8 0, 0.0 0, 0.0 -0.950 360.0 43.9-162.6 177.8 17.9 -16.8 1.7 3 96 A K S S+ 0 0 214 -2,-0.3 2,-0.3 2,-0.0 0, 0.0 0.049 113.7 48.6 62.6 -19.9 15.4 -13.9 2.6 4 97 A Y + 0 0 144 -2,-0.8 3,-0.1 1,-0.1 -2,-0.1 -0.992 52.8 145.0-147.1 135.3 12.4 -16.4 2.1 5 98 A D + 0 0 149 -2,-0.3 2,-0.3 1,-0.2 -1,-0.1 0.473 56.7 43.1-149.0 -14.3 12.0 -19.9 3.7 6 99 A K - 0 0 97 1,-0.0 -1,-0.2 0, 0.0 3,-0.1 -0.901 46.9-150.1-141.9 165.8 8.3 -20.7 4.6 7 100 A Q S S+ 0 0 186 -2,-0.3 2,-0.3 1,-0.1 -1,-0.0 0.136 90.0 41.3-121.3 12.4 4.7 -20.6 3.5 8 101 A I + 0 0 91 1,-0.1 -1,-0.1 2,-0.0 0, 0.0 -0.974 44.4 165.7-154.8 148.7 3.3 -20.3 7.1 9 102 A D >> + 0 0 86 -2,-0.3 3,-2.6 -3,-0.1 4,-1.6 0.488 63.4 87.2-141.4 -18.7 4.3 -18.4 10.3 10 103 A L T 34 S+ 0 0 50 1,-0.3 5,-0.1 2,-0.2 45,-0.0 0.759 84.5 67.5 -55.4 -24.0 1.2 -18.7 12.7 11 104 A S T 34 S+ 0 0 39 1,-0.2 -1,-0.3 48,-0.0 -2,-0.0 0.652 119.4 17.7 -63.4 -20.7 2.9 -22.0 13.8 12 105 A T T <4 S+ 0 0 63 -3,-2.6 -2,-0.2 50,-0.0 -1,-0.2 0.362 97.4 121.5-138.2 -4.8 5.8 -20.0 15.3 13 106 A V < - 0 0 45 -4,-1.6 2,-0.5 1,-0.1 3,-0.1 -0.087 57.1-130.1 -60.0 163.0 4.5 -16.4 15.7 14 107 A D >> - 0 0 85 1,-0.1 3,-1.5 2,-0.0 4,-1.2 -0.933 9.1-161.5-119.7 105.2 4.3 -14.4 19.0 15 108 A L T 34 S+ 0 0 24 -2,-0.5 -1,-0.1 1,-0.3 8,-0.1 0.723 92.4 60.7 -60.4 -20.7 0.8 -12.8 19.5 16 109 A K T 34 S+ 0 0 160 1,-0.2 -1,-0.3 -3,-0.1 25,-0.0 0.789 102.9 50.7 -71.9 -30.9 2.3 -10.4 22.1 17 110 A K T <4 S+ 0 0 173 -3,-1.5 -2,-0.2 2,-0.1 -1,-0.2 0.768 100.6 79.6 -79.8 -30.9 4.7 -9.0 19.3 18 111 A L S < S- 0 0 37 -4,-1.2 2,-0.2 1,-0.1 -3,-0.0 -0.090 79.2-123.1 -62.7 170.5 1.8 -8.4 16.9 19 112 A R >> - 0 0 186 1,-0.0 4,-2.0 21,-0.0 3,-0.9 -0.729 32.6 -93.8-114.7 167.9 -0.6 -5.3 17.1 20 113 A V H 3> S+ 0 0 49 1,-0.3 4,-2.8 -2,-0.2 5,-0.2 0.867 125.4 53.3 -52.9 -41.8 -4.5 -5.2 17.4 21 114 A K H 3> S+ 0 0 174 1,-0.2 4,-1.1 2,-0.2 -1,-0.3 0.836 109.7 48.2 -62.5 -34.7 -4.9 -5.0 13.5 22 115 A E H <> S+ 0 0 110 -3,-0.9 4,-1.2 2,-0.2 -2,-0.2 0.841 112.4 48.0 -76.3 -33.6 -2.7 -8.2 13.1 23 116 A L H X S+ 0 0 0 -4,-2.0 4,-1.7 2,-0.2 3,-0.3 0.937 108.1 55.5 -69.9 -43.9 -4.7 -10.1 15.8 24 117 A K H X S+ 0 0 99 -4,-2.8 4,-2.7 1,-0.2 -2,-0.2 0.828 103.2 57.7 -53.4 -36.0 -8.0 -9.0 14.1 25 118 A K H X S+ 0 0 132 -4,-1.1 4,-2.4 2,-0.2 -1,-0.2 0.932 104.5 48.6 -60.4 -49.8 -6.7 -10.6 10.8 26 119 A I H X S+ 0 0 14 -4,-1.2 4,-1.0 -3,-0.3 -2,-0.2 0.898 116.4 44.9 -59.0 -40.9 -6.2 -14.1 12.4 27 120 A L H X>S+ 0 0 1 -4,-1.7 5,-2.4 2,-0.2 4,-0.7 0.921 113.2 48.3 -68.8 -48.7 -9.8 -13.8 13.8 28 121 A D H <5S+ 0 0 119 -4,-2.7 3,-0.3 3,-0.2 -2,-0.2 0.829 105.1 59.9 -64.6 -33.4 -11.4 -12.4 10.5 29 122 A D H <5S+ 0 0 117 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.851 109.6 42.6 -64.7 -34.4 -9.7 -15.2 8.5 30 123 A W H <5S- 0 0 37 -4,-1.0 -1,-0.2 -3,-0.4 -2,-0.2 0.592 116.5-119.9 -80.7 -13.5 -11.6 -17.8 10.6 31 124 A G T <5S+ 0 0 51 -4,-0.7 2,-0.4 -3,-0.3 -3,-0.2 0.701 78.3 114.2 80.9 22.8 -14.7 -15.6 10.3 32 125 A E < + 0 0 88 -5,-2.4 2,-0.4 -6,-0.1 -2,-0.2 -0.948 36.0 164.9-136.1 110.5 -15.0 -15.2 14.1 33 126 A T - 0 0 78 -2,-0.4 -9,-0.0 -5,-0.1 10,-0.0 -0.974 35.0-114.8-133.8 138.1 -14.5 -11.8 15.9 34 127 A a - 0 0 29 -2,-0.4 9,-0.0 1,-0.1 -7,-0.0 -0.277 18.4-165.2 -65.0 155.7 -15.2 -10.3 19.4 35 128 A K S S+ 0 0 208 -2,-0.0 -1,-0.1 3,-0.0 -2,-0.0 0.554 84.3 36.8-126.3 -15.8 -17.8 -7.5 19.7 36 129 A G S S+ 0 0 80 0, 0.0 2,-0.1 0, 0.0 -2,-0.0 0.270 85.5 125.4-118.6 3.8 -17.3 -6.0 23.2 37 130 A a + 0 0 25 1,-0.1 3,-0.1 5,-0.1 0, 0.0 -0.388 22.6 162.9 -66.8 141.4 -13.4 -6.3 23.3 38 131 A A + 0 0 94 1,-0.2 2,-0.3 -2,-0.1 -1,-0.1 0.253 52.3 67.7-145.9 7.2 -11.4 -3.1 24.0 39 132 A E S >> S- 0 0 145 1,-0.1 3,-1.4 -19,-0.0 4,-0.9 -0.997 76.0-123.7-141.2 141.4 -7.8 -4.3 25.0 40 133 A K H >> S+ 0 0 62 -2,-0.3 4,-1.2 1,-0.3 3,-0.7 0.848 109.3 56.7 -51.9 -44.8 -5.0 -6.0 22.9 41 134 A S H 3> S+ 0 0 73 1,-0.2 4,-2.0 2,-0.2 -1,-0.3 0.768 98.1 61.6 -62.1 -27.7 -4.7 -9.0 25.3 42 135 A D H <> S+ 0 0 45 -3,-1.4 4,-2.5 2,-0.2 -1,-0.2 0.851 101.1 52.6 -72.6 -30.1 -8.4 -9.9 24.9 43 136 A Y H X S+ 0 0 0 -4,-2.1 4,-2.7 2,-0.2 3,-1.5 0.967 111.3 47.4 -68.3 -53.2 -7.3 -16.3 19.2 48 141 A N H 3< S+ 0 0 102 -4,-2.7 -2,-0.2 1,-0.3 -1,-0.2 0.790 108.8 57.3 -63.9 -24.6 -6.3 -19.0 21.8 49 142 A E H 3< S+ 0 0 114 -4,-2.1 -1,-0.3 -5,-0.2 -2,-0.2 0.764 120.7 26.9 -66.5 -29.7 -10.0 -19.9 22.3 50 143 A L H XX S+ 0 0 21 -3,-1.5 4,-1.8 -4,-0.6 3,-0.8 0.575 96.5 86.2-121.0 -15.8 -10.4 -20.6 18.5 51 144 A M H 3X S+ 0 0 21 -4,-2.7 4,-2.6 1,-0.2 8,-0.4 0.889 93.3 49.5 -55.1 -42.7 -6.8 -21.7 17.3 52 145 A P H 34 S+ 0 0 82 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 0.711 111.4 52.4 -70.4 -17.8 -7.6 -25.4 18.4 53 146 A K H <4 S+ 0 0 149 -3,-0.8 -2,-0.2 2,-0.1 -3,-0.1 0.857 130.1 11.1 -78.9 -38.6 -10.9 -25.1 16.4 54 147 A Y H < S+ 0 0 91 -4,-1.8 -3,-0.2 1,-0.1 3,-0.1 0.516 128.7 43.0-124.6 -11.6 -9.4 -23.9 13.1 55 148 A A >X + 0 0 14 -4,-2.6 3,-2.2 -5,-0.3 4,-2.1 -0.435 42.9 160.8-144.5 64.9 -5.5 -24.2 13.2 56 149 A P H 3> S+ 0 0 87 0, 0.0 4,-1.0 0, 0.0 -1,-0.1 0.800 78.9 72.4 -49.8 -28.4 -4.2 -27.5 14.7 57 150 A K H 34 S+ 0 0 178 1,-0.2 -6,-0.0 2,-0.1 -2,-0.0 0.433 115.0 20.3 -62.7 -3.5 -0.9 -26.5 12.8 58 151 A A H <4 S+ 0 0 17 -3,-2.2 -1,-0.2 -7,-0.2 -7,-0.1 0.493 107.5 75.1-143.7 -24.3 -0.5 -23.7 15.5 59 152 A A H < S+ 0 0 46 -4,-2.1 -2,-0.1 -8,-0.4 2,-0.1 0.833 82.7 84.9 -62.7 -36.1 -2.6 -24.8 18.6 60 153 A S S < S- 0 0 92 -4,-1.0 2,-0.0 1,-0.1 0, 0.0 -0.415 85.6-112.0 -68.7 143.3 0.1 -27.4 19.6 61 154 A A - 0 0 97 1,-0.1 -1,-0.1 -2,-0.1 -2,-0.1 -0.253 34.3 -98.8 -68.0 159.9 3.2 -26.4 21.6 62 155 A R - 0 0 185 2,-0.0 2,-0.3 -50,-0.0 -1,-0.1 -0.214 31.2-156.5 -67.5 166.3 6.8 -26.4 20.3 63 156 A T - 0 0 103 1,-0.1 -1,-0.0 -2,-0.0 0, 0.0 -0.972 23.2-146.4-147.7 135.8 9.4 -29.1 20.9 64 157 A D 0 0 174 -2,-0.3 -1,-0.1 1,-0.2 -2,-0.0 0.659 360.0 360.0 -64.0 -18.6 13.3 -29.0 20.8 65 158 A L 0 0 182 -3,-0.0 -1,-0.2 0, 0.0 0, 0.0 -0.971 360.0 360.0-143.1 360.0 13.0 -32.7 19.4