==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=23-JUL-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 28-MAR-10 2KVT . COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN YAIA; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR Y.TANG,X.CHEN,C.CICCOSANTI,H.JANJUA,R.XIAO,T.ACTON,J.EVERETT . 71 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6427.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 41 57.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 17 23.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 12.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 10 14.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 236 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 80.7 -29.5 -11.1 -5.4 2 2 A P - 0 0 132 0, 0.0 2,-0.4 0, 0.0 0, 0.0 -0.747 360.0-164.8 -92.5 150.3 -26.3 -10.5 -3.2 3 3 A T - 0 0 128 -2,-0.3 0, 0.0 2,-0.0 0, 0.0 -0.991 12.9-165.4-141.7 130.5 -23.5 -13.1 -3.0 4 4 A K - 0 0 201 -2,-0.4 0, 0.0 4,-0.1 0, 0.0 -0.943 19.2-148.4-114.7 109.8 -20.5 -13.5 -0.6 5 5 A P - 0 0 69 0, 0.0 -2,-0.0 0, 0.0 4,-0.0 -0.255 28.9-107.5 -71.7 161.5 -17.7 -15.9 -1.9 6 6 A P S S+ 0 0 123 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 0.750 119.6 44.3 -59.8 -23.8 -15.6 -18.1 0.4 7 7 A Y S S- 0 0 177 2,-0.0 3,-0.0 27,-0.0 0, 0.0 -0.806 89.2-158.8-123.2 87.9 -12.7 -15.7 -0.4 8 8 A P - 0 0 70 0, 0.0 2,-1.5 0, 0.0 -4,-0.1 -0.144 31.4 -96.1 -64.9 160.6 -14.1 -12.0 -0.2 9 9 A R + 0 0 99 49,-0.1 2,-0.4 24,-0.0 -2,-0.0 -0.600 65.3 153.4 -80.7 88.2 -12.5 -9.0 -1.9 10 10 A E + 0 0 110 -2,-1.5 24,-0.7 -3,-0.0 23,-0.6 -0.957 17.9 178.0-124.4 138.9 -10.4 -7.6 1.0 11 11 A A E -A 32 0A 2 -2,-0.4 21,-0.3 21,-0.2 2,-0.3 -0.763 5.0-166.9-129.1 175.8 -7.2 -5.5 1.0 12 12 A Y E -A 31 0A 69 19,-3.0 19,-1.8 -2,-0.2 2,-0.3 -0.903 21.2-103.5-153.5 179.8 -4.8 -3.9 3.5 13 13 A I E -A 30 0A 58 -2,-0.3 2,-0.4 17,-0.2 17,-0.2 -0.877 18.2-161.0-118.0 146.0 -1.9 -1.4 3.8 14 14 A V E -A 29 0A 47 15,-2.4 15,-3.1 -2,-0.3 2,-0.7 -0.980 12.6-144.6-128.1 121.1 1.9 -1.9 4.4 15 15 A T E +A 28 0A 103 -2,-0.4 13,-0.2 13,-0.2 2,-0.2 -0.743 31.8 164.9 -87.9 115.3 4.1 0.9 5.7 16 16 A I E -A 27 0A 40 11,-2.8 11,-2.8 -2,-0.7 2,-0.4 -0.674 29.9-125.5-121.1 175.6 7.6 0.7 4.2 17 17 A E E +A 26 0A 139 9,-0.2 2,-0.2 -2,-0.2 9,-0.2 -0.970 25.9 177.0-125.2 141.5 10.7 3.0 3.8 18 18 A K E +A 25 0A 75 7,-2.2 7,-2.5 -2,-0.4 2,-0.4 -0.797 37.2 46.8-131.8 175.8 12.6 4.0 0.7 19 19 A G E S+A 24 0A 70 -2,-0.2 5,-0.2 5,-0.2 -2,-0.0 -0.770 94.7 9.8 100.3-136.7 15.5 6.2 -0.5 20 20 A K - 0 0 138 3,-2.0 -2,-0.0 -2,-0.4 5,-0.0 -0.581 68.9-117.8 -87.7 146.9 19.0 6.3 1.1 21 21 A P S S+ 0 0 142 0, 0.0 3,-0.2 0, 0.0 -1,-0.1 0.788 118.5 26.2 -53.1 -31.5 20.2 3.8 3.8 22 22 A G S S+ 0 0 64 1,-0.2 2,-1.0 0, 0.0 -3,-0.0 0.815 123.8 51.5 -96.4 -42.6 20.5 6.6 6.3 23 23 A Q S S+ 0 0 134 2,-0.0 -3,-2.0 0, 0.0 2,-0.2 -0.737 77.3 174.5 -99.7 85.2 18.0 9.1 4.8 24 24 A T E -A 19 0A 64 -2,-1.0 2,-0.3 -5,-0.2 -5,-0.2 -0.606 18.4-149.3 -91.9 152.8 14.8 7.1 4.5 25 25 A V E -A 18 0A 85 -7,-2.5 -7,-2.2 -2,-0.2 2,-0.3 -0.941 23.9-108.8-121.2 145.7 11.3 8.3 3.4 26 26 A T E +A 17 0A 79 -2,-0.3 2,-0.3 -9,-0.2 -9,-0.2 -0.559 40.2 176.1 -78.5 128.0 7.9 6.9 4.5 27 27 A W E -A 16 0A 76 -11,-2.8 -11,-2.8 -2,-0.3 2,-0.5 -0.960 21.0-143.9-132.1 151.2 5.9 5.0 1.8 28 28 A Y E -AB 15 44A 56 16,-2.9 16,-2.8 -2,-0.3 2,-0.5 -0.954 11.6-161.6-118.8 119.1 2.5 3.1 1.9 29 29 A Q E -AB 14 43A 21 -15,-3.1 -15,-2.4 -2,-0.5 2,-0.7 -0.857 12.4-141.8-100.6 129.8 2.0 -0.1 -0.2 30 30 A L E +AB 13 42A 2 12,-3.0 11,-3.2 -2,-0.5 12,-0.8 -0.806 33.3 165.5 -88.8 111.7 -1.5 -1.3 -1.0 31 31 A R E -AB 12 40A 57 -19,-1.8 -19,-3.0 -2,-0.7 2,-0.3 -0.923 18.3-156.8-127.2 153.9 -1.5 -5.2 -0.8 32 32 A A E -AB 11 39A 0 7,-1.1 7,-0.5 4,-0.5 4,-0.3 -0.975 27.3-132.3-134.1 145.2 -4.4 -7.7 -0.7 33 33 A D S S+ 0 0 70 -23,-0.6 -22,-0.1 -2,-0.3 5,-0.1 0.674 80.4 107.8 -62.6 -17.4 -4.8 -11.3 0.6 34 34 A H S S- 0 0 39 -24,-0.7 -1,-0.1 2,-0.2 -2,-0.0 -0.960 95.2 -9.5-120.3 128.8 -6.5 -11.9 -2.8 35 35 A P S S- 0 0 106 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 -0.968 144.5 -12.1 -80.1 -17.6 -5.4 -13.4 -5.0 36 36 A K > - 0 0 125 -4,-0.3 3,-2.2 1,-0.0 -4,-0.5 -0.999 55.2-128.2-143.4 143.3 -2.0 -13.5 -3.2 37 37 A P T 3 S+ 0 0 78 0, 0.0 -4,-0.1 0, 0.0 -3,-0.1 0.575 111.6 56.4 -70.4 -8.6 -0.7 -11.6 -0.1 38 38 A D T 3 S+ 0 0 108 -5,-0.1 2,-0.9 -7,-0.1 -5,-0.1 0.415 78.0 118.3 -97.1 -1.0 2.4 -10.5 -2.1 39 39 A S E < -B 32 0A 35 -3,-2.2 -7,-1.1 -7,-0.5 2,-0.5 -0.555 53.2-156.8 -72.6 103.9 0.2 -8.9 -4.8 40 40 A L E +B 31 0A 65 -2,-0.9 -9,-0.2 -9,-0.2 3,-0.1 -0.723 15.6 178.2 -83.0 122.6 1.1 -5.2 -4.8 41 41 A I E - 0 0 79 -11,-3.2 2,-0.3 -2,-0.5 -1,-0.2 0.912 61.0 -24.1 -88.4 -54.2 -1.8 -3.1 -6.2 42 42 A S E -B 30 0A 44 -12,-0.8 -12,-3.0 8,-0.0 2,-0.4 -0.990 53.1-132.3-159.5 156.7 -0.4 0.5 -5.9 43 43 A E E +B 29 0A 67 -2,-0.3 -14,-0.2 -14,-0.2 -3,-0.0 -0.934 22.9 175.5-119.3 139.3 2.1 2.6 -3.9 44 44 A H E -B 28 0A 36 -16,-2.8 -16,-2.9 -2,-0.4 6,-0.1 -1.000 33.0-140.7-143.3 143.1 1.4 6.0 -2.2 45 45 A P S S+ 0 0 65 0, 0.0 2,-0.3 0, 0.0 -16,-0.1 0.649 88.4 61.7 -75.3 -15.1 3.5 8.4 0.0 46 46 A T S > S- 0 0 64 -18,-0.1 4,-1.1 1,-0.1 -18,-0.1 -0.870 77.2-134.1-116.9 148.7 0.4 9.3 2.1 47 47 A A H > S+ 0 0 32 -2,-0.3 4,-2.3 1,-0.2 3,-0.3 0.898 103.9 58.7 -63.3 -42.7 -1.8 7.1 4.3 48 48 A Q H > S+ 0 0 128 1,-0.2 4,-2.9 2,-0.2 5,-0.2 0.910 103.4 51.2 -56.9 -46.4 -5.1 8.7 2.9 49 49 A E H > S+ 0 0 81 1,-0.2 4,-2.5 2,-0.2 -1,-0.2 0.848 110.3 51.3 -59.8 -34.2 -4.2 7.6 -0.7 50 50 A A H X S+ 0 0 0 -4,-1.1 4,-2.1 -3,-0.3 -2,-0.2 0.916 112.1 44.8 -69.0 -44.0 -3.6 4.1 0.6 51 51 A M H X S+ 0 0 105 -4,-2.3 4,-1.7 2,-0.2 -2,-0.2 0.903 115.6 47.8 -65.3 -42.8 -7.0 3.9 2.4 52 52 A D H X S+ 0 0 72 -4,-2.9 4,-2.1 -5,-0.2 -2,-0.2 0.938 111.7 49.3 -63.6 -48.0 -8.8 5.4 -0.6 53 53 A A H X S+ 0 0 14 -4,-2.5 4,-1.6 1,-0.2 -2,-0.2 0.877 105.7 58.7 -58.6 -39.3 -7.0 3.0 -3.0 54 54 A K H X S+ 0 0 57 -4,-2.1 4,-1.9 1,-0.2 3,-0.3 0.918 106.3 48.1 -55.1 -44.3 -8.1 0.2 -0.7 55 55 A K H X S+ 0 0 98 -4,-1.7 4,-3.3 1,-0.2 -2,-0.2 0.905 105.2 58.4 -63.1 -41.7 -11.7 1.3 -1.2 56 56 A R H < S+ 0 0 103 -4,-2.1 6,-0.4 1,-0.2 -1,-0.2 0.832 110.8 44.1 -56.3 -32.8 -11.1 1.3 -5.0 57 57 A Y H < S+ 0 0 36 -4,-1.6 -1,-0.2 -3,-0.3 -2,-0.2 0.851 121.0 37.9 -77.7 -37.6 -10.1 -2.4 -4.7 58 58 A E H < S+ 0 0 51 -4,-1.9 -2,-0.2 -5,-0.2 -3,-0.2 0.718 98.9 88.2 -92.3 -22.8 -13.0 -3.4 -2.4 59 59 A D S >< S- 0 0 37 -4,-3.3 3,-1.7 -5,-0.2 0, 0.0 -0.399 90.9-109.3 -76.1 155.1 -15.8 -1.2 -3.9 60 60 A P T 3 S+ 0 0 116 0, 0.0 -1,-0.1 0, 0.0 -4,-0.1 0.559 108.8 82.0 -62.8 -6.5 -18.0 -2.5 -6.9 61 61 A D T 3 S+ 0 0 123 1,-0.1 2,-1.2 2,-0.1 -5,-0.1 0.869 76.3 73.8 -66.9 -36.9 -16.2 -0.0 -9.1 62 62 A K S < S- 0 0 74 -3,-1.7 -1,-0.1 -6,-0.4 3,-0.1 -0.694 82.8-159.4 -78.2 98.4 -13.3 -2.5 -9.5 63 63 A E - 0 0 155 -2,-1.2 2,-0.8 1,-0.1 -2,-0.1 -0.199 36.3 -69.5 -75.7 168.9 -14.9 -5.0 -11.8 64 64 A L - 0 0 151 1,-0.2 -1,-0.1 2,-0.0 -2,-0.0 -0.463 51.0-177.9 -63.1 103.5 -13.8 -8.7 -12.4 65 65 A E + 0 0 135 -2,-0.8 2,-0.6 -3,-0.1 -1,-0.2 0.182 36.3 126.5 -96.1 16.7 -10.5 -8.1 -14.2 66 66 A H S S- 0 0 163 1,-0.1 2,-0.1 4,-0.0 3,-0.1 -0.664 72.7-108.9 -74.9 119.5 -9.8 -11.9 -14.7 67 67 A H > - 0 0 138 -2,-0.6 3,-2.0 1,-0.1 2,-0.1 -0.290 38.1-105.7 -58.4 120.9 -9.1 -12.4 -18.4 68 68 A H G > S- 0 0 157 1,-0.3 3,-1.3 2,-0.2 -1,-0.1 -0.227 91.3 -21.8 -53.2 114.3 -12.1 -14.2 -20.0 69 69 A H G 3 S- 0 0 171 1,-0.3 -1,-0.3 2,-0.1 -2,-0.1 0.806 124.7 -57.0 53.9 35.1 -11.1 -17.9 -20.7 70 70 A H G < 0 0 191 -3,-2.0 -1,-0.3 1,-0.0 -2,-0.2 0.815 360.0 360.0 66.0 32.5 -7.4 -16.8 -20.7 71 71 A H < 0 0 192 -3,-1.3 -2,-0.1 -4,-0.0 -4,-0.1 0.792 360.0 360.0 -99.2 360.0 -7.9 -14.2 -23.5