==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=23-JUL-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 29-MAR-10 2KVZ . COMPND 2 MOLECULE: ISPE; . SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES; . AUTHOR J.R.CORT,T.A.RAMELOT,D.LEE,C.CICCOSANTI,H.JANJUA,T.B.ACTON,R . 85 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6776.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 55 64.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 7 8.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 17.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 26 30.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 221 0, 0.0 3,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 94.1 25.7 7.1 -2.5 2 2 A D + 0 0 144 0, 0.0 3,-0.5 0, 0.0 2,-0.4 0.175 360.0 104.6-138.9 13.3 22.6 8.9 -1.2 3 3 A F S S+ 0 0 197 1,-0.2 0, 0.0 3,-0.0 0, 0.0 -0.780 80.3 19.2-100.7 142.0 21.2 10.3 -4.5 4 4 A G S S+ 0 0 65 -2,-0.4 -1,-0.2 1,-0.2 0, 0.0 0.739 91.4 123.6 75.2 22.7 18.1 8.7 -6.2 5 5 A K - 0 0 117 -3,-0.5 2,-0.2 56,-0.1 -1,-0.2 -0.883 42.8-166.7-122.1 97.8 17.1 7.0 -3.0 6 6 A P - 0 0 62 0, 0.0 53,-0.0 0, 0.0 -3,-0.0 -0.549 19.7-149.3 -81.5 148.0 13.5 7.9 -1.8 7 7 A N + 0 0 37 -2,-0.2 22,-0.3 22,-0.1 2,-0.1 0.139 58.2 127.4 -98.9 18.3 12.3 7.0 1.7 8 8 A Q - 0 0 60 20,-0.1 55,-0.7 50,-0.1 2,-0.5 -0.447 57.3-131.6 -81.5 148.2 8.8 6.6 0.3 9 9 A V E -Ab 27 63A 0 18,-2.5 18,-3.2 53,-0.2 2,-1.0 -0.868 14.3-137.6-100.5 128.2 6.6 3.5 0.9 10 10 A T E -Ab 26 64A 21 53,-3.8 55,-2.6 -2,-0.5 2,-0.6 -0.749 20.2-166.9 -89.3 102.7 4.9 2.0 -2.1 11 11 A V E -Ab 25 65A 0 14,-3.5 14,-3.0 -2,-1.0 2,-0.5 -0.819 2.7-164.6 -92.6 119.8 1.4 1.1 -1.1 12 12 A N E - b 0 66A 23 53,-2.7 55,-2.5 -2,-0.6 2,-1.1 -0.923 13.5-149.3-110.4 125.8 -0.4 -1.1 -3.6 13 13 A Y E -Ab 22 67A 9 9,-0.6 8,-2.0 -2,-0.5 9,-0.7 -0.754 26.5-165.2 -92.7 91.6 -4.1 -1.6 -3.5 14 14 A L E -Ab 20 68A 15 53,-2.4 55,-3.4 -2,-1.1 6,-0.3 -0.533 16.9-163.0 -86.1 143.6 -4.4 -5.1 -4.9 15 15 A D - 0 0 14 4,-2.8 -1,-0.1 -2,-0.2 33,-0.1 0.943 55.3 -78.2 -82.9 -74.4 -7.7 -6.7 -6.1 16 16 A E S S+ 0 0 61 3,-0.2 54,-0.1 54,-0.1 4,-0.1 0.269 121.7 65.1-165.2 -44.3 -7.2 -10.4 -6.2 17 17 A N S S- 0 0 112 2,-0.1 3,-0.1 1,-0.1 -3,-0.0 0.055 121.0 -96.4 -83.5 27.7 -5.3 -11.3 -9.4 18 18 A N S S+ 0 0 131 1,-0.3 2,-0.5 0, 0.0 -1,-0.1 0.705 88.1 135.2 63.0 22.4 -2.4 -9.4 -7.8 19 19 A T - 0 0 84 -7,-0.0 -4,-2.8 2,-0.0 2,-0.6 -0.867 57.6-129.0-104.6 132.1 -3.4 -6.4 -9.8 20 20 A S E -A 14 0A 39 -2,-0.5 -6,-0.3 -6,-0.3 4,-0.1 -0.708 14.8-167.0 -81.9 118.0 -3.6 -3.0 -8.2 21 21 A I E S+ 0 0 62 -8,-2.0 -1,-0.1 -2,-0.6 -7,-0.1 0.466 77.0 49.6 -84.0 -2.5 -7.0 -1.4 -9.0 22 22 A A E S-A 13 0A 22 -9,-0.7 -9,-0.6 20,-0.0 3,-0.1 -0.996 103.2 -91.4-135.4 140.3 -5.6 1.9 -7.8 23 23 A P E - 0 0 124 0, 0.0 -2,-0.1 0, 0.0 -12,-0.1 -0.246 60.0 -89.7 -49.0 130.3 -2.4 3.7 -8.8 24 24 A S E - 0 0 46 1,-0.1 2,-0.6 -4,-0.1 -12,-0.2 -0.188 44.5-131.6 -49.8 124.1 0.5 2.7 -6.4 25 25 A L E -A 11 0A 63 -14,-3.0 -14,-3.5 -3,-0.1 2,-1.2 -0.702 8.4-148.8 -89.2 119.6 0.4 5.2 -3.5 26 26 A Y E -A 10 0A 141 -2,-0.6 2,-0.8 -16,-0.2 -16,-0.2 -0.751 13.3-153.8 -88.4 95.2 3.8 6.7 -2.6 27 27 A L E -A 9 0A 32 -18,-3.2 -18,-2.5 -2,-1.2 2,-0.6 -0.618 16.6-176.4 -72.9 108.9 3.5 7.2 1.1 28 28 A S + 0 0 72 -2,-0.8 2,-0.1 -20,-0.2 -20,-0.1 -0.920 19.7 135.1-116.7 107.0 5.9 10.1 1.8 29 29 A G - 0 0 29 -2,-0.6 2,-0.2 -22,-0.3 -22,-0.1 -0.191 58.0 -42.0-120.7-143.0 6.3 11.1 5.5 30 30 A L > - 0 0 118 -2,-0.1 3,-1.3 1,-0.1 28,-0.3 -0.512 65.7 -95.2 -88.7 158.8 9.2 11.9 7.7 31 31 A F T 3 S+ 0 0 124 1,-0.3 28,-0.1 -2,-0.2 3,-0.1 -0.578 108.8 6.4 -76.5 134.3 12.4 10.0 7.7 32 32 A N T 3 S+ 0 0 107 26,-1.5 2,-0.4 -2,-0.3 -1,-0.3 0.713 98.8 148.6 67.4 22.0 12.6 7.2 10.4 33 33 A E < - 0 0 69 -3,-1.3 25,-1.2 25,-0.1 2,-0.8 -0.701 53.1-128.0 -90.8 136.3 9.0 8.0 11.2 34 34 A A - 0 0 77 -2,-0.4 23,-0.2 23,-0.2 2,-0.1 -0.770 42.6-169.9 -79.3 111.4 6.5 5.4 12.4 35 35 A Y - 0 0 12 -2,-0.8 2,-0.3 19,-0.3 21,-0.2 -0.376 21.0-121.1-102.9 175.4 3.7 5.8 10.0 36 36 A N - 0 0 142 -2,-0.1 -1,-0.0 19,-0.1 19,-0.0 -0.859 30.6-111.7-112.5 153.1 0.1 4.6 9.6 37 37 A V - 0 0 36 -2,-0.3 2,-0.5 1,-0.0 18,-0.0 -0.758 26.0-133.6 -90.7 118.9 -1.2 2.7 6.6 38 38 A P - 0 0 42 0, 0.0 2,-0.4 0, 0.0 -13,-0.1 -0.589 29.8-174.3 -72.0 119.4 -3.7 4.6 4.4 39 39 A M - 0 0 78 -2,-0.5 2,-0.4 2,-0.0 -26,-0.0 -0.934 11.4-174.4-122.5 141.0 -6.7 2.4 3.6 40 40 A K - 0 0 142 -2,-0.4 2,-1.4 2,-0.0 0, 0.0 -0.999 27.3-129.3-135.5 134.8 -9.7 3.0 1.3 41 41 A K > - 0 0 137 -2,-0.4 3,-0.6 3,-0.1 2,-0.5 -0.658 31.9-161.3 -86.4 91.9 -12.7 0.8 0.8 42 42 A I G > - 0 0 32 -2,-1.4 3,-0.6 1,-0.2 -20,-0.0 -0.637 66.7 -22.6 -82.5 120.9 -12.8 0.6 -3.0 43 43 A K G 3 S- 0 0 164 -2,-0.5 -1,-0.2 1,-0.2 -2,-0.0 0.708 121.8 -61.2 56.0 26.0 -16.1 -0.5 -4.5 44 44 A G G < S+ 0 0 24 -3,-0.6 28,-0.6 1,-0.2 2,-0.3 0.963 88.6 162.1 66.1 52.1 -17.1 -2.0 -1.2 45 45 A Y E < -C 71 0A 38 -3,-0.6 2,-0.4 26,-0.1 26,-0.2 -0.740 36.9-124.6 -98.1 154.0 -14.3 -4.6 -0.9 46 46 A T E -C 70 0A 66 24,-2.7 24,-2.8 -2,-0.3 2,-0.7 -0.815 33.1-104.6 -95.6 136.1 -13.3 -6.4 2.2 47 47 A L E -C 69 0A 54 -2,-0.4 22,-0.3 22,-0.3 3,-0.1 -0.469 35.6-170.8 -60.8 106.5 -9.6 -6.2 3.3 48 48 A L E - 0 0 82 20,-1.9 2,-0.3 -2,-0.7 -1,-0.2 0.963 54.8 -59.0 -64.1 -51.7 -8.4 -9.6 2.3 49 49 A K E -C 68 0A 118 19,-1.2 19,-2.3 -3,-0.1 2,-0.3 -0.894 41.0-148.4 173.3 151.2 -5.0 -9.2 4.0 50 50 A Y E -C 67 0A 89 -2,-0.3 17,-0.2 17,-0.2 2,-0.1 -0.869 39.2 -90.6-126.3 167.7 -1.8 -7.2 4.1 51 51 A D - 0 0 85 15,-0.6 -2,-0.0 -2,-0.3 0, 0.0 -0.471 31.5-119.9 -78.9 153.4 1.7 -8.3 5.0 52 52 A S S > S+ 0 0 106 1,-0.1 2,-1.7 -2,-0.1 3,-0.7 0.777 94.6 88.1 -63.8 -27.0 2.9 -8.1 8.6 53 53 A E T 3 + 0 0 121 1,-0.2 -2,-0.2 3,-0.0 -1,-0.1 -0.564 56.2 95.2 -79.9 87.0 5.7 -5.7 7.7 54 54 A I T 3 + 0 0 13 -2,-1.7 2,-0.7 1,-0.2 -19,-0.3 0.452 60.6 79.2-135.2 -39.0 4.0 -2.4 8.0 55 55 A L S < S+ 0 0 147 -3,-0.7 2,-0.2 -21,-0.1 -1,-0.2 -0.680 74.6 70.4 -83.1 114.4 4.8 -1.1 11.5 56 56 A G S S- 0 0 38 -2,-0.7 2,-0.3 -21,-0.2 -21,-0.2 -0.766 83.9 -54.9-178.4-132.5 8.2 0.3 11.6 57 57 A V - 0 0 55 -2,-0.2 2,-0.5 -23,-0.2 -23,-0.2 -0.951 55.2 -87.4-135.5 154.7 9.9 3.4 10.2 58 58 A F - 0 0 3 -25,-1.2 -26,-1.5 -28,-0.3 -50,-0.1 -0.521 58.2-146.1 -59.1 112.3 10.4 5.0 6.8 59 59 A T - 0 0 50 -2,-0.5 4,-0.1 2,-0.3 -27,-0.1 -0.094 22.1-106.5 -81.8 178.9 13.5 3.2 5.6 60 60 A E S S+ 0 0 137 2,-0.1 -52,-0.1 -29,-0.1 -1,-0.1 0.331 106.1 53.9 -88.1 5.6 16.4 4.3 3.4 61 61 A S S S- 0 0 74 -54,-0.1 -2,-0.3 -56,-0.1 2,-0.3 -0.992 104.8 -88.5-139.8 142.7 15.0 2.2 0.6 62 62 A P - 0 0 57 0, 0.0 2,-0.2 0, 0.0 -53,-0.2 -0.336 45.3-150.1 -54.8 112.7 11.4 2.2 -1.0 63 63 A Q E -b 9 0A 30 -55,-0.7 -53,-3.8 -2,-0.3 2,-0.5 -0.605 3.8-142.1 -86.4 147.3 9.4 -0.2 1.1 64 64 A T E -b 10 0A 84 -2,-0.2 2,-0.5 -55,-0.2 -53,-0.2 -0.944 13.9-170.4-118.9 116.9 6.6 -2.1 -0.7 65 65 A I E -b 11 0A 1 -55,-2.6 -53,-2.7 -2,-0.5 2,-0.8 -0.909 10.6-152.6-107.5 127.2 3.3 -2.8 1.1 66 66 A N E -b 12 0A 74 -2,-0.5 2,-0.7 -55,-0.2 -15,-0.6 -0.857 15.1-179.7-100.4 104.5 0.7 -5.1 -0.4 67 67 A I E -bC 13 50A 0 -55,-2.5 -53,-2.4 -2,-0.8 2,-0.5 -0.918 11.2-163.7-106.0 111.6 -2.8 -4.2 0.7 68 68 A I E -bC 14 49A 37 -19,-2.3 -20,-1.9 -2,-0.7 -19,-1.2 -0.828 9.6-163.7-105.5 129.6 -5.3 -6.6 -0.9 69 69 A Y E - C 0 47A 9 -55,-3.4 2,-0.3 -2,-0.5 -22,-0.3 -0.938 13.4-152.8-112.5 115.5 -9.0 -6.0 -1.0 70 70 A Q E - C 0 46A 86 -24,-2.8 -24,-2.7 -2,-0.6 2,-0.4 -0.614 25.7-105.1 -91.3 142.0 -11.2 -9.0 -1.8 71 71 A K E - C 0 45A 37 -2,-0.3 -26,-0.1 -26,-0.2 -1,-0.1 -0.504 23.3-156.5 -62.7 118.9 -14.5 -8.8 -3.5 72 72 A K + 0 0 134 -28,-0.6 -1,-0.2 -2,-0.4 -27,-0.1 0.349 65.0 105.6 -82.4 7.4 -17.1 -9.4 -0.8 73 73 A A S S- 0 0 57 1,-0.1 -2,-0.1 4,-0.0 5,-0.0 -0.787 78.5-114.2 -89.0 127.2 -19.5 -10.5 -3.5 74 74 A P >> - 0 0 87 0, 0.0 2,-1.6 0, 0.0 3,-0.8 0.004 32.8 -95.2 -56.0 165.5 -20.0 -14.3 -3.6 75 75 A E T 34 S+ 0 0 134 1,-0.2 5,-0.1 2,-0.2 -2,-0.0 -0.166 106.1 88.8 -81.2 45.0 -18.8 -16.5 -6.5 76 76 A Q T 34 S+ 0 0 178 -2,-1.6 -1,-0.2 3,-0.1 -3,-0.0 0.785 103.2 19.5-102.6 -50.6 -22.3 -16.3 -8.1 77 77 A A T <4 S+ 0 0 101 -3,-0.8 2,-0.5 2,-0.0 -2,-0.2 0.527 118.8 79.4 -93.1 -10.1 -21.9 -13.2 -10.1 78 78 A L < - 0 0 39 -4,-0.8 2,-0.5 -7,-0.0 -1,-0.0 -0.880 66.4-163.8-102.4 124.7 -18.1 -13.5 -9.9 79 79 A E - 0 0 134 -2,-0.5 2,-0.7 2,-0.0 -3,-0.1 -0.932 9.9-161.6-113.7 127.0 -16.5 -16.0 -12.3 80 80 A H - 0 0 61 -2,-0.5 2,-0.8 -5,-0.1 -2,-0.0 -0.904 13.4-157.3-103.5 105.6 -13.0 -17.4 -11.9 81 81 A H - 0 0 140 -2,-0.7 2,-0.5 2,-0.0 -2,-0.0 -0.749 7.0-156.6 -90.3 109.6 -11.9 -18.8 -15.2 82 82 A H + 0 0 173 -2,-0.8 2,-0.3 2,-0.1 -2,-0.0 -0.755 25.5 152.0 -91.0 122.7 -9.1 -21.3 -14.7 83 83 A H - 0 0 142 -2,-0.5 2,-0.8 0, 0.0 -2,-0.0 -0.953 58.5-100.2-144.2 164.6 -6.8 -22.1 -17.6 84 84 A H 0 0 185 -2,-0.3 -2,-0.1 1,-0.2 0, 0.0 0.063 360.0 360.0 -78.6 32.4 -3.2 -23.2 -18.1 85 85 A H 0 0 213 -2,-0.8 -1,-0.2 0, 0.0 -3,-0.0 0.942 360.0 360.0 70.8 360.0 -2.2 -19.6 -18.8