==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-MAR-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSFERASE 30-NOV-09 3KVQ . COMPND 2 MOLECULE: VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR Y.YANG,Y.OPATOWSKY,P.XIE,J.SCHLESSINGER . 82 3 2 0 2 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4894.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 69.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 6.1 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 30 36.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 14.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 3 0 0 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 667 A P 0 0 89 0, 0.0 2,-0.3 0, 0.0 74,-0.1 0.000 360.0 360.0 360.0 20.6 0.9 39.5 46.8 2 668 A T - 0 0 84 23,-0.6 2,-0.2 72,-0.1 21,-0.0 -0.626 360.0-174.6-124.6 82.1 4.4 40.8 47.5 3 669 A I + 0 0 29 -2,-0.3 2,-0.3 21,-0.2 21,-0.2 -0.469 6.7 171.3 -76.7 141.0 6.8 39.0 45.1 4 670 A T B +A 23 0A 77 19,-1.9 19,-2.2 -2,-0.2 -2,-0.0 -0.834 25.5 75.9-133.9 172.3 10.5 39.5 45.4 5 671 A G S S- 0 0 48 -2,-0.3 2,-2.8 17,-0.2 18,-0.1 0.195 83.9 -50.3 96.0 154.1 13.6 37.8 43.8 6 672 A N + 0 0 73 16,-0.1 2,-1.4 1,-0.1 16,-0.1 -0.105 64.2 140.7 -63.0 42.7 15.5 37.7 40.4 7 673 A L + 0 0 10 -2,-2.8 2,-0.3 14,-0.3 70,-0.1 -0.688 33.6 143.0 -81.4 98.2 12.9 37.0 37.7 8 674 A E - 0 0 126 -2,-1.4 70,-0.1 70,-0.1 68,-0.0 -0.955 58.4 -83.5-133.7 154.6 14.3 39.3 35.1 9 675 A N + 0 0 117 -2,-0.3 2,-0.3 68,-0.2 71,-0.2 -0.168 60.3 174.9 -50.2 146.5 14.7 39.2 31.3 10 676 A Q E -b 80 0B 56 69,-2.4 71,-2.2 2,-0.0 2,-0.4 -0.960 33.7-140.8-172.1 155.1 17.7 37.2 30.3 11 677 A T E +b 81 0B 79 -2,-0.3 2,-0.4 69,-0.2 71,-0.2 -0.858 21.5 177.4-117.5 138.9 20.0 35.7 27.8 12 678 A T E -b 82 0B 12 69,-2.2 71,-1.7 -2,-0.4 2,-0.3 -0.996 30.3-115.0-145.2 143.7 21.8 32.4 28.0 13 679 A S E > -b 83 0B 52 -2,-0.4 3,-1.8 69,-0.2 45,-0.2 -0.592 48.1 -93.2 -80.1 137.8 24.0 30.5 25.7 14 680 A I T 3 S+ 0 0 92 69,-1.8 45,-0.2 -2,-0.3 -1,-0.1 -0.060 111.4 28.3 -45.9 144.1 22.6 27.2 24.6 15 681 A G T 3 S+ 0 0 46 43,-3.3 42,-0.4 1,-0.2 -1,-0.3 0.394 103.6 102.2 73.8 -3.5 23.6 24.2 26.7 16 682 A E < - 0 0 119 -3,-1.8 42,-3.1 42,-0.2 2,-0.3 -0.233 70.0 -95.3 -96.2-160.7 24.0 26.4 29.8 17 683 A S - 0 0 56 39,-0.2 2,-0.4 40,-0.2 39,-0.2 -0.839 15.7-159.7-117.8 148.8 21.8 27.0 32.9 18 684 A I E -F 55 0C 2 37,-2.1 37,-2.0 -2,-0.3 2,-0.5 -0.990 11.6-175.5-121.0 132.9 19.3 29.5 34.1 19 685 A E E +F 54 0C 126 -2,-0.4 2,-0.3 35,-0.2 35,-0.2 -0.937 17.3 153.6-125.6 108.6 18.6 29.8 37.8 20 686 A V E -F 53 0C 4 33,-2.6 33,-2.9 -2,-0.5 2,-0.3 -0.884 18.5-164.1-126.9 170.4 15.8 32.2 38.9 21 687 A S E -F 52 0C 30 -2,-0.3 2,-0.4 31,-0.2 -14,-0.3 -0.986 12.1-162.1-152.9 144.4 13.4 32.5 41.9 22 688 A a - 0 0 0 29,-1.7 2,-0.4 -2,-0.3 -17,-0.2 -0.954 10.6-170.2-112.9 142.5 10.3 34.2 43.1 23 689 A T B -A 4 0A 57 -19,-2.2 -19,-1.9 -2,-0.4 2,-0.2 -0.981 8.5-157.1-134.5 123.5 9.3 34.5 46.8 24 690 A A 0 0 19 -2,-0.4 -21,-0.2 3,-0.3 5,-0.1 -0.659 360.0 360.0 -96.2 152.2 5.9 35.7 47.9 25 691 A S 0 0 91 -2,-0.2 -23,-0.6 45,-0.0 -22,-0.0 -0.850 360.0 360.0-107.4 360.0 4.6 37.3 51.2 26 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 27 696 A P 0 0 76 0, 0.0 2,-0.3 0, 0.0 -3,-0.3 0.000 360.0 360.0 360.0-169.6 1.0 31.9 49.5 28 697 A Q - 0 0 72 43,-0.6 43,-1.2 1,-0.0 2,-0.4 -0.553 360.0-141.2 -78.0 128.0 1.6 29.2 46.9 29 698 A I E -C 70 0B 7 20,-0.6 2,-0.3 -2,-0.3 41,-0.2 -0.758 19.8-174.5 -89.4 130.6 4.0 30.1 44.0 30 699 A M E -C 69 0B 92 39,-2.6 39,-3.4 -2,-0.4 2,-0.4 -0.932 10.4-145.1-124.0 148.9 3.1 28.8 40.5 31 700 A W E -C 68 0B 6 -2,-0.3 7,-1.6 37,-0.2 2,-0.3 -0.915 12.6-172.8-119.9 140.9 5.1 29.1 37.2 32 701 A F E -CD 67 37B 44 35,-2.7 35,-2.3 -2,-0.4 2,-0.5 -0.940 14.0-156.8-128.2 152.1 4.1 29.5 33.6 33 702 A K E S-C 66 0B 47 3,-2.8 33,-0.2 -2,-0.3 3,-0.1 -0.974 88.6 -12.0-127.7 123.8 5.7 29.5 30.2 34 703 A D S S- 0 0 75 31,-2.9 -1,-0.2 -2,-0.5 32,-0.1 0.956 131.9 -56.9 49.8 53.0 4.0 31.4 27.4 35 704 A N S S+ 0 0 108 30,-0.4 2,-0.3 1,-0.2 -1,-0.2 0.844 118.1 108.2 48.0 42.6 1.1 31.5 29.8 36 705 A E S S- 0 0 140 -3,-0.1 -3,-2.8 3,-0.0 -1,-0.2 -0.970 82.6 -80.8-139.3 160.2 0.8 27.8 30.2 37 706 A T B -D 32 0B 94 -2,-0.3 2,-0.8 -5,-0.2 -5,-0.2 -0.336 54.9-104.7 -65.2 140.6 1.7 25.6 33.1 38 707 A L - 0 0 18 -7,-1.6 2,-1.0 1,-0.1 -1,-0.1 -0.562 30.0-139.1 -65.8 105.6 5.3 25.0 33.2 39 708 A V - 0 0 120 -2,-0.8 -1,-0.1 -6,-0.1 5,-0.0 -0.592 18.3-139.9 -64.7 100.6 5.8 21.4 31.9 40 709 A E + 0 0 112 -2,-1.0 2,-0.3 2,-0.1 5,-0.1 -0.283 31.5 167.9 -54.4 141.3 8.5 19.9 34.2 41 710 A D B > -G 44 0C 60 3,-0.5 3,-2.8 0, 0.0 0, 0.0 -0.906 56.4 -78.0-147.2 168.7 11.0 17.7 32.3 42 711 A S T 3 S+ 0 0 129 -2,-0.3 -2,-0.1 1,-0.3 3,-0.0 0.707 131.3 47.0 -46.2 -25.4 14.3 16.3 33.2 43 712 A G T 3 S+ 0 0 11 1,-0.1 13,-2.1 12,-0.1 2,-0.6 0.420 100.3 74.6 -95.2 -4.4 16.0 19.7 32.7 44 713 A I E < +GH 41 55C 10 -3,-2.8 -3,-0.5 11,-0.2 2,-0.5 -0.958 61.0 177.6-117.0 117.3 13.5 21.8 34.6 45 714 A V E - H 0 54C 45 9,-2.6 9,-2.0 -2,-0.6 2,-0.4 -0.987 14.3-159.8-129.3 118.2 13.6 21.5 38.3 46 715 A L E - H 0 53C 27 -2,-0.5 2,-0.3 7,-0.2 7,-0.2 -0.812 19.6-176.5 -90.4 133.3 11.4 23.3 40.9 47 716 A K E >> + H 0 52C 95 5,-2.3 5,-2.4 -2,-0.4 4,-1.0 -0.960 44.7 18.9-128.2 156.8 12.7 23.6 44.4 48 717 A D T >45S- 0 0 109 -2,-0.3 3,-1.4 1,-0.3 -1,-0.2 0.965 135.6 -30.0 61.0 66.4 11.7 24.9 47.9 49 718 A G T 345S- 0 0 53 1,-0.3 -20,-0.6 -3,-0.1 -1,-0.3 0.768 115.4 -66.6 67.3 25.3 8.1 25.3 47.7 50 719 A N T 345S+ 0 0 58 2,-0.1 -1,-0.3 -22,-0.1 -2,-0.2 0.663 108.2 120.7 64.8 22.2 8.5 26.0 43.9 51 720 A R T <<5 + 0 0 82 -3,-1.4 -29,-1.7 -4,-1.0 2,-0.6 0.810 61.1 61.8 -81.3 -34.7 10.3 29.2 44.6 52 721 A N E < -FH 21 47C 47 -5,-2.4 -5,-2.3 -31,-0.2 2,-0.5 -0.868 64.6-168.3 -96.3 123.3 13.5 28.2 42.7 53 722 A L E -FH 20 46C 1 -33,-2.9 -33,-2.6 -2,-0.6 2,-0.4 -0.914 7.1-179.1-106.5 128.9 13.4 27.4 39.0 54 723 A T E -FH 19 45C 5 -9,-2.0 -9,-2.6 -2,-0.5 2,-0.5 -1.000 9.5-170.5-126.2 133.4 16.4 25.8 37.3 55 724 A I E -FH 18 44C 2 -37,-2.0 -37,-2.1 -2,-0.4 2,-0.4 -0.994 11.3-162.5-121.4 122.5 16.8 24.9 33.7 56 725 A R + 0 0 122 -13,-2.1 -39,-0.2 -2,-0.5 -40,-0.1 -0.837 68.6 10.5-107.6 144.2 19.8 22.8 32.7 57 726 A R S S- 0 0 215 -42,-0.4 -1,-0.2 -2,-0.4 -40,-0.2 0.969 88.6-146.4 58.2 54.8 21.2 22.4 29.2 58 727 A V - 0 0 2 -42,-3.1 -43,-3.3 -3,-0.3 2,-0.2 -0.247 19.6-171.1 -57.4 139.3 19.0 25.1 27.9 59 728 A R > - 0 0 111 -45,-0.2 3,-1.9 -44,-0.1 4,-0.1 -0.710 39.7 -91.7-120.5 178.4 17.8 24.6 24.4 60 729 A K G > S+ 0 0 92 1,-0.3 3,-2.3 -2,-0.2 22,-0.2 0.936 119.9 64.7 -59.9 -45.5 15.9 26.8 21.8 61 730 A E G 3 S+ 0 0 133 1,-0.3 -1,-0.3 -3,-0.0 -3,-0.0 0.549 90.6 69.3 -53.0 -4.8 12.5 25.5 22.9 62 731 A D G < S+ 0 0 9 -3,-1.9 2,-0.3 2,-0.0 -1,-0.3 0.435 74.7 109.1 -90.8 -0.9 13.1 27.1 26.4 63 732 A E < + 0 0 62 -3,-2.3 2,-0.3 -4,-0.1 18,-0.2 -0.571 50.6 74.9 -84.5 136.9 12.9 30.5 24.9 64 733 A G E S- E 0 80B 2 16,-1.2 16,-3.0 -2,-0.3 2,-0.5 -0.990 81.9 -41.7 156.6-166.6 9.8 32.4 25.9 65 734 A L E - E 0 79B 43 -2,-0.3 -31,-2.9 14,-0.2 2,-0.5 -0.855 47.2-162.3-107.6 121.9 8.0 34.3 28.5 66 735 A Y E -CE 33 78B 1 12,-3.5 12,-1.8 -2,-0.5 2,-0.4 -0.906 4.8-169.2-113.5 129.0 8.1 33.0 32.1 67 736 A T E -CE 32 77B 2 -35,-2.3 -35,-2.7 -2,-0.5 2,-0.5 -0.950 11.1-163.3-118.1 134.8 5.7 34.0 34.8 68 737 A a E -CE 31 76B 0 8,-2.1 8,-1.3 -2,-0.4 2,-0.4 -0.974 20.0-167.9-113.7 120.5 5.8 33.3 38.5 69 738 A Q E -CE 30 75B 51 -39,-3.4 -39,-2.6 -2,-0.5 2,-0.5 -0.893 18.0-160.4-111.8 136.4 2.5 33.9 40.1 70 739 A A E CE 29 74B 0 4,-2.3 4,-2.4 -2,-0.4 -41,-0.2 -0.974 360.0 360.0-113.1 126.7 1.5 34.2 43.8 71 740 A b 0 0 95 -43,-1.2 -43,-0.6 -2,-0.5 -2,-0.0 -0.937 360.0 360.0-127.9 360.0 -2.3 33.6 44.2 72 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 73 745 A b 0 0 109 0, 0.0 -2,-0.3 0, 0.0 2,-0.2 0.000 360.0 360.0 360.0 109.0 -2.8 37.8 43.2 74 746 A A E - E 0 70B 19 -4,-2.4 -4,-2.3 2,-0.0 2,-0.3 -0.642 360.0-177.0-113.3 166.9 0.8 39.0 42.2 75 747 A K E - E 0 69B 101 -6,-0.2 2,-0.3 -2,-0.2 -6,-0.2 -0.996 17.7-164.1-155.4 149.3 3.0 38.3 39.2 76 748 A V E - E 0 68B 45 -8,-1.3 -8,-2.1 -2,-0.3 2,-0.4 -0.987 15.1-160.3-132.1 145.2 6.3 38.9 37.6 77 749 A E E + E 0 67B 84 -2,-0.3 2,-0.3 -10,-0.2 -10,-0.2 -0.921 11.7 173.1-119.9 148.4 7.2 38.2 34.0 78 750 A A E - E 0 66B 0 -12,-1.8 -12,-3.5 -2,-0.4 2,-0.4 -0.962 22.7-138.6-151.3 142.2 10.5 37.7 32.3 79 751 A F E - E 0 65B 80 -2,-0.3 -69,-2.4 -14,-0.2 2,-0.5 -0.829 15.7-152.0-100.2 137.0 11.4 36.7 28.8 80 752 A F E -bE 10 64B 0 -16,-3.0 -16,-1.2 -2,-0.4 2,-0.5 -0.940 5.9-164.1-111.2 119.9 14.3 34.3 28.3 81 753 A I E -b 11 0B 77 -71,-2.2 -69,-2.2 -2,-0.5 2,-0.8 -0.859 9.3-151.3 -97.5 125.9 16.4 34.4 25.0 82 754 A I E -b 12 0B 0 -2,-0.5 -69,-0.2 -71,-0.2 -19,-0.1 -0.848 22.2-170.2 -93.4 98.6 18.6 31.4 24.3 83 755 A E E b 13 0B 105 -71,-1.7 -69,-1.8 -2,-0.8 -71,-0.0 -0.105 360.0 360.0 -69.3-176.7 21.7 32.7 22.2 84 756 A G 0 0 95 -71,-0.2 -72,-0.0 -70,-0.0 -2,-0.0 0.004 360.0 360.0 75.6 360.0 24.4 30.6 20.3