==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 29-JAN-02 1KWD . COMPND 2 MOLECULE: MAJOR SURFACE GLYCOPROTEIN G; . SOURCE 2 SYNTHETIC: YES; . AUTHOR M.SUGAWARA,J.CZAPLICKI,J.FERRAGE,J.F.HAEUW,U.F.POWER, . 16 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1971.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 5 31.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 25.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 6.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 172 A P 0 0 171 0, 0.0 2,-0.4 0, 0.0 15,-0.2 0.000 360.0 360.0 360.0 129.3 7.9 5.9 -1.1 2 173 A a - 0 0 76 13,-0.1 2,-0.1 14,-0.1 13,-0.1 -0.811 360.0-116.4 -96.4 131.9 4.5 4.2 -0.5 3 174 A S - 0 0 103 -2,-0.4 2,-1.6 8,-0.2 -1,-0.0 -0.421 25.5-111.0 -71.3 136.4 2.0 3.9 -3.5 4 175 A I + 0 0 160 -2,-0.1 2,-0.8 2,-0.0 -1,-0.1 -0.520 42.6 179.4 -71.1 81.6 -1.4 5.7 -3.3 5 176 A b - 0 0 36 -2,-1.6 2,-0.8 3,-0.1 3,-0.4 -0.823 16.7-151.0 -94.0 101.7 -3.7 2.5 -3.1 6 177 A S - 0 0 91 -2,-0.8 -2,-0.0 1,-0.2 -1,-0.0 -0.718 66.9 -23.1 -84.9 105.9 -7.3 3.9 -2.8 7 178 A N S S+ 0 0 166 -2,-0.8 -1,-0.2 1,-0.1 0, 0.0 0.977 94.3 118.5 54.4 76.2 -9.5 1.4 -0.8 8 179 A N > - 0 0 101 -3,-0.4 4,-0.7 1,-0.0 3,-0.2 -0.646 47.6-156.5-157.4 95.0 -7.8 -2.1 -1.1 9 180 A P T 4 S+ 0 0 134 0, 0.0 4,-0.5 0, 0.0 3,-0.1 0.729 88.0 50.0 -52.2 -31.8 -6.7 -3.6 2.5 10 181 A T T 4 S+ 0 0 135 1,-0.2 3,-0.5 2,-0.1 4,-0.4 0.923 103.2 56.8 -75.1 -49.8 -3.9 -6.0 1.2 11 182 A b T 4 S+ 0 0 53 -3,-0.2 3,-0.3 1,-0.2 -1,-0.2 0.664 97.7 62.6 -53.8 -29.4 -1.9 -3.6 -1.1 12 183 A W S < S+ 0 0 161 -4,-0.7 -1,-0.2 1,-0.2 -2,-0.1 0.860 94.6 55.2 -70.9 -44.0 -1.1 -0.9 1.7 13 184 A A S S+ 0 0 93 -3,-0.5 2,-1.3 -4,-0.5 -1,-0.2 0.647 88.2 78.3 -65.8 -24.1 1.1 -2.9 4.3 14 185 A I + 0 0 165 -4,-0.4 2,-0.4 -3,-0.3 -1,-0.2 -0.677 61.3 132.7 -90.6 78.6 3.9 -4.1 1.8 15 186 A a 0 0 55 -2,-1.3 -13,-0.1 1,-0.1 -3,-0.0 -0.987 360.0 360.0-132.9 116.5 5.9 -0.8 1.6 16 187 A K 0 0 271 -2,-0.4 -1,-0.1 -15,-0.2 -14,-0.1 0.506 360.0 360.0-131.3 360.0 9.7 -1.0 2.0