==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 30-NOV-09 3KW6 . COMPND 2 MOLECULE: 26S PROTEASE REGULATORY SUBUNIT 8; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR J.SEETHARAMAN,M.SU,D.WANG,H.JANJUA,K.CUNNINGHAM,L.OWENS, . 75 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4648.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 54 72.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 3 4.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 10.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 39 52.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -1 A P 0 0 91 0, 0.0 37,-0.2 0, 0.0 36,-0.1 0.000 360.0 360.0 360.0 38.7 43.9 43.2 5.0 2 0 A P + 0 0 92 0, 0.0 36,-0.1 0, 0.0 5,-0.1 0.743 360.0 108.1-108.0 -33.0 41.6 42.4 2.1 3 1 A P - 0 0 30 0, 0.0 33,-0.3 0, 0.0 34,-0.2 -0.253 59.6-141.6 -54.2 128.5 42.5 38.9 0.7 4 2 A N > - 0 0 103 31,-0.1 4,-2.5 32,-0.1 5,-0.2 -0.165 36.6 -81.0 -80.2-178.3 39.9 36.3 1.5 5 3 A E H > S+ 0 0 70 1,-0.2 4,-2.7 2,-0.2 5,-0.2 0.904 130.7 43.7 -52.3 -51.6 40.7 32.7 2.5 6 4 A E H > S+ 0 0 87 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.860 114.2 51.5 -63.8 -35.6 41.2 31.4 -1.1 7 5 A A H > S+ 0 0 33 2,-0.2 4,-1.0 1,-0.2 -1,-0.2 0.854 111.1 48.4 -69.3 -35.1 43.2 34.5 -2.0 8 6 A R H >X S+ 0 0 15 -4,-2.5 4,-1.6 2,-0.2 3,-0.7 0.952 111.0 49.6 -68.4 -49.3 45.4 34.0 1.1 9 7 A L H 3X S+ 0 0 3 -4,-2.7 4,-2.4 1,-0.3 5,-0.2 0.881 106.7 56.1 -56.3 -42.1 45.9 30.3 0.3 10 8 A D H 3X S+ 0 0 79 -4,-2.2 4,-1.5 1,-0.2 -1,-0.3 0.824 106.1 50.7 -61.8 -31.6 46.8 31.1 -3.3 11 9 A I H < S+ 0 0 3 -4,-1.1 3,-1.1 1,-0.1 5,-0.3 0.530 81.3 96.0 -97.9 -13.0 55.9 27.6 -1.0 17 15 A R T 3< S+ 0 0 205 -4,-0.8 -1,-0.1 -3,-0.3 -2,-0.1 0.798 92.9 34.6 -46.9 -39.4 56.2 26.2 -4.6 18 16 A K T 3 S+ 0 0 179 -4,-0.2 -1,-0.3 -3,-0.2 2,-0.1 0.508 99.3 97.9 -98.1 -7.1 60.0 26.1 -4.3 19 17 A X S < S- 0 0 50 -3,-1.1 2,-1.5 1,-0.1 41,-0.1 -0.475 83.1-114.9 -80.0 154.5 60.3 25.3 -0.6 20 18 A N E -a 60 0A 90 39,-0.7 41,-1.8 -2,-0.1 2,-0.2 -0.657 39.0-162.4 -91.7 81.7 60.8 21.7 0.5 21 19 A L E -a 61 0A 57 -2,-1.5 41,-0.2 -5,-0.3 3,-0.1 -0.473 19.9-114.9 -69.6 129.0 57.5 21.2 2.3 22 20 A T > - 0 0 51 39,-2.8 3,-1.1 -2,-0.2 -1,-0.1 -0.238 45.2 -82.3 -60.7 151.8 57.5 18.3 4.6 23 21 A R T 3 S+ 0 0 246 1,-0.2 -1,-0.1 39,-0.0 0, 0.0 -0.310 114.7 16.9 -57.3 132.5 55.1 15.4 3.8 24 22 A G T 3 S+ 0 0 78 1,-0.2 -1,-0.2 -3,-0.1 2,-0.2 0.781 81.2 157.9 75.8 26.8 51.5 16.1 4.8 25 23 A I < - 0 0 37 -3,-1.1 2,-0.5 36,-0.1 -1,-0.2 -0.541 31.9-145.1 -79.2 152.3 51.8 19.9 5.4 26 24 A N > + 0 0 64 -2,-0.2 4,-0.8 1,-0.1 3,-0.1 -0.842 21.7 176.3-125.3 98.1 48.5 21.7 5.2 27 25 A L H > S+ 0 0 23 -2,-0.5 4,-2.1 1,-0.2 3,-0.2 0.799 80.1 61.2 -69.6 -28.6 48.6 25.2 3.7 28 26 A R H > S+ 0 0 87 1,-0.2 4,-2.6 2,-0.2 -1,-0.2 0.921 100.7 53.8 -64.6 -41.7 44.8 25.7 3.9 29 27 A K H > S+ 0 0 122 1,-0.2 4,-0.6 2,-0.2 -1,-0.2 0.808 108.1 51.2 -61.7 -27.5 44.9 25.4 7.6 30 28 A I H >< S+ 0 0 0 -4,-0.8 3,-0.9 -3,-0.2 -1,-0.2 0.905 108.2 51.1 -74.7 -42.6 47.6 28.1 7.6 31 29 A A H >< S+ 0 0 0 -4,-2.1 3,-2.1 1,-0.2 -2,-0.2 0.914 104.1 58.7 -59.7 -42.2 45.3 30.3 5.5 32 30 A E H 3< S+ 0 0 94 -4,-2.6 -1,-0.2 1,-0.3 -2,-0.2 0.747 100.0 57.8 -59.3 -25.3 42.5 29.8 8.0 33 31 A L T << S+ 0 0 97 -3,-0.9 -1,-0.3 -4,-0.6 -2,-0.2 0.454 97.0 68.2 -85.9 2.4 44.6 31.2 10.8 34 32 A X X + 0 0 0 -3,-2.1 3,-1.8 -4,-0.2 -1,-0.2 0.003 55.8 154.5-116.0 34.8 45.1 34.5 8.9 35 33 A P T 3 S+ 0 0 86 0, 0.0 3,-0.1 0, 0.0 -31,-0.1 -0.372 76.6 20.6 -61.5 132.9 41.8 36.4 8.7 36 34 A G T 3 S+ 0 0 48 -33,-0.3 2,-0.3 1,-0.3 -32,-0.1 0.567 91.6 138.0 86.9 8.1 42.5 40.1 8.3 37 35 A A < - 0 0 0 -3,-1.8 -1,-0.3 -34,-0.2 2,-0.1 -0.678 52.7-124.7 -89.8 142.1 46.0 39.7 7.0 38 36 A S > - 0 0 36 -2,-0.3 4,-1.5 -37,-0.2 3,-0.3 -0.405 29.6-107.9 -76.6 161.2 47.3 41.8 4.2 39 37 A G H > S+ 0 0 28 1,-0.2 4,-1.8 2,-0.2 5,-0.1 0.836 121.5 56.5 -58.9 -32.5 48.7 39.9 1.2 40 38 A A H > S+ 0 0 74 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.885 103.3 52.7 -67.0 -40.1 52.1 41.0 2.2 41 39 A E H > S+ 0 0 59 -3,-0.3 4,-1.7 2,-0.2 -1,-0.2 0.843 106.6 53.5 -64.8 -33.2 51.7 39.4 5.7 42 40 A V H X S+ 0 0 0 -4,-1.5 4,-1.2 2,-0.2 -1,-0.2 0.929 109.4 48.0 -66.6 -43.4 50.7 36.1 4.0 43 41 A K H X S+ 0 0 93 -4,-1.8 4,-2.1 1,-0.2 3,-0.4 0.900 108.7 55.6 -61.6 -39.9 54.0 36.3 2.0 44 42 A G H X S+ 0 0 19 -4,-2.3 4,-3.1 1,-0.2 -1,-0.2 0.844 100.4 57.9 -61.0 -36.7 55.8 37.0 5.2 45 43 A V H X S+ 0 0 0 -4,-1.7 4,-1.4 2,-0.2 -1,-0.2 0.854 107.4 48.9 -62.8 -34.8 54.5 33.9 6.8 46 44 A C H X S+ 0 0 1 -4,-1.2 4,-1.8 -3,-0.4 -2,-0.2 0.958 115.2 41.5 -69.0 -51.3 56.0 31.9 4.0 47 45 A T H X S+ 0 0 56 -4,-2.1 4,-1.9 1,-0.2 -2,-0.2 0.883 115.2 51.3 -64.3 -39.8 59.4 33.5 4.2 48 46 A E H X S+ 0 0 52 -4,-3.1 4,-1.4 1,-0.2 -1,-0.2 0.805 107.3 53.7 -67.3 -30.6 59.4 33.5 8.0 49 47 A A H X S+ 0 0 0 -4,-1.4 4,-1.3 -5,-0.2 -1,-0.2 0.886 108.3 50.3 -69.9 -38.0 58.5 29.8 8.0 50 48 A G H X S+ 0 0 4 -4,-1.8 4,-2.6 1,-0.2 -2,-0.2 0.898 107.0 54.4 -64.9 -40.5 61.5 29.2 5.8 51 49 A X H X S+ 0 0 99 -4,-1.9 4,-2.6 1,-0.2 -1,-0.2 0.827 103.1 55.5 -62.4 -35.9 63.7 31.1 8.2 52 50 A Y H X S+ 0 0 32 -4,-1.4 4,-0.7 2,-0.2 -1,-0.2 0.865 110.2 47.9 -65.4 -33.8 62.6 28.9 11.1 53 51 A A H ><>S+ 0 0 2 -4,-1.3 5,-2.2 2,-0.2 3,-1.5 0.974 112.6 45.6 -69.5 -55.2 63.8 26.0 9.1 54 52 A L H ><5S+ 0 0 106 -4,-2.6 3,-2.4 1,-0.3 -2,-0.2 0.879 105.9 61.7 -54.8 -40.8 67.2 27.5 8.2 55 53 A R H 3<5S+ 0 0 153 -4,-2.6 -1,-0.3 1,-0.3 -2,-0.2 0.780 108.8 43.6 -56.4 -27.7 67.6 28.6 11.8 56 54 A E T <<5S- 0 0 111 -3,-1.5 -1,-0.3 -4,-0.7 -2,-0.2 0.170 119.9-109.1-104.0 15.7 67.5 24.9 12.6 57 55 A R T < 5S+ 0 0 208 -3,-2.4 2,-0.4 1,-0.2 -3,-0.2 0.879 74.6 140.9 59.5 38.7 69.8 23.9 9.8 58 56 A R < - 0 0 39 -5,-2.2 -1,-0.2 -8,-0.1 -2,-0.2 -0.934 43.5-169.2-116.5 137.3 66.8 22.3 8.0 59 57 A V S S+ 0 0 104 -2,-0.4 -39,-0.7 -3,-0.1 2,-0.5 0.712 74.8 75.3 -91.4 -24.1 66.0 22.3 4.3 60 58 A H E S-a 20 0A 82 -7,-0.1 2,-0.4 -41,-0.1 -39,-0.2 -0.783 74.7-144.1 -94.9 128.5 62.5 21.0 4.8 61 59 A V E -a 21 0A 3 -41,-1.8 -39,-2.8 -2,-0.5 2,-0.2 -0.749 17.7-154.2 -93.0 136.3 59.8 23.3 6.2 62 60 A T > - 0 0 31 -2,-0.4 4,-2.0 -13,-0.2 3,-0.2 -0.588 31.4-107.3-108.3 168.9 57.2 21.9 8.5 63 61 A Q H > S+ 0 0 39 1,-0.2 4,-2.8 2,-0.2 5,-0.2 0.872 121.7 56.3 -59.9 -35.2 53.6 22.7 9.6 64 62 A E H > S+ 0 0 119 2,-0.2 4,-3.1 1,-0.2 5,-0.2 0.890 102.0 54.1 -66.4 -37.7 55.1 23.9 12.9 65 63 A D H > S+ 0 0 0 -3,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.945 113.0 44.6 -58.4 -47.6 57.4 26.4 11.1 66 64 A F H X S+ 0 0 0 -4,-2.0 4,-2.2 2,-0.2 -2,-0.2 0.915 112.3 51.0 -62.5 -45.0 54.3 27.8 9.4 67 65 A E H X S+ 0 0 94 -4,-2.8 4,-1.5 1,-0.2 -2,-0.2 0.935 112.7 45.9 -59.6 -46.5 52.3 27.8 12.6 68 66 A X H X S+ 0 0 63 -4,-3.1 4,-1.6 1,-0.2 -1,-0.2 0.870 109.5 56.2 -65.1 -36.1 55.0 29.7 14.4 69 67 A A H X S+ 0 0 0 -4,-2.2 4,-2.9 -5,-0.2 5,-0.3 0.929 102.8 54.1 -62.1 -46.6 55.4 32.1 11.5 70 68 A V H X>S+ 0 0 12 -4,-2.2 4,-2.4 1,-0.2 5,-0.5 0.933 110.2 46.2 -53.9 -50.1 51.7 33.1 11.6 71 69 A A H X5S+ 0 0 59 -4,-1.5 4,-1.3 1,-0.2 -1,-0.2 0.834 113.9 51.2 -63.3 -31.5 51.9 34.0 15.3 72 70 A K H <5S+ 0 0 89 -4,-1.6 -2,-0.2 -5,-0.2 -1,-0.2 0.955 113.8 41.1 -69.9 -51.0 55.2 35.9 14.6 73 71 A V H <5S+ 0 0 42 -4,-2.9 -2,-0.2 1,-0.1 -3,-0.2 0.857 129.2 26.5 -66.6 -41.0 53.9 38.0 11.7 74 72 A X H <5 0 0 74 -4,-2.4 -3,-0.2 -5,-0.3 -2,-0.2 0.790 360.0 360.0 -96.9 -31.8 50.5 38.9 13.1 75 73 A Q << 0 0 112 -4,-1.3 -4,-0.0 -5,-0.5 0, 0.0 -0.177 360.0 360.0 -94.1 360.0 50.9 38.7 16.9