==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=15-MAY-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 06-MAY-10 2KXJ . COMPND 2 MOLECULE: UBX DOMAIN-CONTAINING PROTEIN 4; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR Q.WU,H.HUANG,J.ZHANG,Q.HU,J.WU,Y.SHI . 90 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6784.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 47 52.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 3 3.3 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 15.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 13.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 308 A M 0 0 236 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -54.3 -14.2 -1.1 -20.9 2 309 A G + 0 0 69 1,-0.1 2,-0.3 0, 0.0 0, 0.0 0.367 360.0 105.5 151.7 53.3 -16.7 1.6 -21.8 3 310 A H - 0 0 143 1,-0.0 -1,-0.1 3,-0.0 3,-0.1 -0.965 35.8-174.2-146.8 161.1 -16.3 4.8 -19.8 4 311 A H + 0 0 184 -2,-0.3 2,-0.4 1,-0.1 -1,-0.0 -0.068 59.0 95.6-149.1 36.9 -15.0 8.4 -20.1 5 312 A H + 0 0 129 3,-0.0 2,-0.3 0, 0.0 3,-0.1 -0.883 41.2 152.2-137.2 103.9 -15.3 9.8 -16.6 6 313 A H + 0 0 169 -2,-0.4 -3,-0.0 1,-0.2 0, 0.0 -0.983 49.0 23.0-134.2 144.7 -12.2 9.8 -14.3 7 314 A H S S+ 0 0 138 -2,-0.3 -1,-0.2 3,-0.1 4,-0.1 0.893 73.0 108.8 68.0 103.7 -11.1 12.1 -11.4 8 315 A H + 0 0 173 2,-0.4 3,-0.1 -3,-0.1 -2,-0.0 0.213 68.3 54.8-167.0 -46.5 -13.9 14.0 -9.7 9 316 A M S S- 0 0 190 1,-0.2 2,-0.3 2,-0.0 -3,-0.0 0.993 116.8 -36.9 -67.3 -65.1 -14.6 12.6 -6.2 10 317 A S - 0 0 92 2,-0.1 -2,-0.4 0, 0.0 -1,-0.2 -0.881 38.3-128.1-150.9-179.2 -11.2 12.9 -4.7 11 318 A T S S+ 0 0 74 -2,-0.3 20,-1.6 -4,-0.1 2,-0.3 -0.179 70.7 101.8-132.0 40.1 -7.4 12.5 -5.3 12 319 A V E -A 30 0A 50 18,-0.3 2,-0.3 19,-0.1 -2,-0.1 -0.826 57.5-134.2-123.2 162.6 -6.4 10.2 -2.4 13 320 A A E -A 29 0A 2 16,-2.2 16,-3.1 -2,-0.3 2,-0.4 -0.866 8.5-147.2-118.5 151.2 -5.6 6.4 -2.1 14 321 A R E -A 28 0A 110 64,-0.7 68,-1.3 -2,-0.3 2,-0.4 -0.968 15.4-175.9-120.7 130.5 -6.7 3.8 0.4 15 322 A I E -Ab 27 82A 6 12,-1.2 12,-2.3 -2,-0.4 2,-0.6 -0.954 17.0-145.3-127.5 145.7 -4.6 0.9 1.6 16 323 A Q E -Ab 26 83A 57 66,-1.3 68,-1.9 -2,-0.4 2,-0.8 -0.931 12.5-150.8-112.9 113.0 -5.3 -2.1 3.9 17 324 A F E -A 25 0A 13 8,-3.2 8,-2.7 -2,-0.6 2,-0.1 -0.737 21.1-175.9 -87.0 111.6 -2.3 -3.3 6.0 18 325 A R E -A 24 0A 72 -2,-0.8 6,-0.2 6,-0.3 67,-0.1 -0.336 4.2-173.7 -96.1-179.6 -2.7 -7.0 6.7 19 326 A L > - 0 0 34 4,-0.8 3,-2.5 -2,-0.1 68,-0.0 -0.976 45.1 -89.1-168.1 162.9 -0.6 -9.4 8.9 20 327 A P T 3 S+ 0 0 95 0, 0.0 -1,-0.0 0, 0.0 -2,-0.0 0.760 113.9 77.6 -50.3 -27.6 -0.1 -13.1 9.9 21 328 A D T 3 S- 0 0 132 1,-0.1 3,-0.1 2,-0.1 -3,-0.0 0.799 108.8-119.9 -53.9 -31.4 -2.6 -12.4 12.7 22 329 A G S < S+ 0 0 66 -3,-2.5 -1,-0.1 1,-0.5 2,-0.1 -0.090 81.8 88.6 115.6 -34.1 -5.4 -12.6 10.1 23 330 A S - 0 0 80 -5,-0.1 -4,-0.8 2,-0.0 -1,-0.5 -0.323 57.8-155.0 -90.5 175.5 -6.8 -9.1 10.5 24 331 A S E -A 18 0A 36 -6,-0.2 2,-0.4 -3,-0.1 -6,-0.3 -0.988 9.2-133.9-150.5 155.3 -5.9 -5.9 8.7 25 332 A F E -A 17 0A 67 -8,-2.7 -8,-3.2 -2,-0.3 2,-0.4 -0.943 16.6-141.1-117.6 134.1 -6.0 -2.1 9.3 26 333 A T E +A 16 0A 65 -2,-0.4 2,-0.3 -10,-0.3 -10,-0.2 -0.754 24.3 174.7 -95.1 138.0 -7.2 0.5 6.8 27 334 A N E -A 15 0A 56 -12,-2.3 -12,-1.2 -2,-0.4 2,-0.6 -0.813 30.9-110.4-133.2 172.9 -5.5 3.9 6.4 28 335 A Q E +A 14 0A 133 -2,-0.3 -14,-0.2 -14,-0.2 -2,-0.0 -0.937 34.1 170.1-113.4 119.4 -5.6 6.9 4.2 29 336 A F E -A 13 0A 17 -16,-3.1 -16,-2.2 -2,-0.6 45,-0.1 -0.971 30.6-123.9-131.2 117.2 -2.7 7.7 1.8 30 337 A P E -A 12 0A 55 0, 0.0 43,-0.6 0, 0.0 44,-0.3 0.014 27.6-108.1 -53.0 162.5 -2.9 10.4 -0.9 31 338 A S S S+ 0 0 3 -20,-1.6 44,-0.2 1,-0.2 -19,-0.1 0.532 121.1 33.2 -71.1 -6.1 -2.3 9.6 -4.6 32 339 A D S S+ 0 0 114 -21,-0.2 -1,-0.2 40,-0.2 3,-0.1 0.629 91.1 106.7-119.8 -28.7 1.0 11.4 -4.3 33 340 A A S S- 0 0 24 39,-0.1 40,-0.9 1,-0.1 41,-0.1 -0.178 84.8 -86.1 -54.4 145.5 2.1 10.8 -0.7 34 341 A P B > -C 72 0B 47 0, 0.0 3,-0.6 0, 0.0 4,-0.3 -0.191 25.7-138.4 -55.7 143.9 5.1 8.3 -0.3 35 342 A L T >> S+ 0 0 11 36,-2.2 3,-1.5 34,-1.2 4,-0.8 0.831 99.1 70.4 -72.6 -33.5 4.2 4.6 -0.2 36 343 A E H 3> S+ 0 0 84 33,-1.6 4,-3.4 35,-0.3 5,-0.4 0.758 80.5 78.1 -55.1 -26.1 6.8 4.0 2.6 37 344 A E H <> S+ 0 0 60 -3,-0.6 4,-2.4 1,-0.3 -1,-0.3 0.895 94.2 47.6 -51.2 -43.4 4.4 5.9 4.9 38 345 A A H <> S+ 0 0 3 -3,-1.5 4,-1.8 -4,-0.3 -1,-0.3 0.863 113.9 48.3 -66.3 -35.9 2.2 2.8 5.1 39 346 A R H X S+ 0 0 110 -4,-0.8 4,-2.3 2,-0.2 -2,-0.2 0.956 115.5 41.5 -68.8 -52.6 5.3 0.7 5.8 40 347 A Q H X S+ 0 0 80 -4,-3.4 4,-2.8 1,-0.2 -2,-0.2 0.854 112.4 56.7 -64.3 -35.9 6.8 2.9 8.5 41 348 A F H X S+ 0 0 96 -4,-2.4 4,-1.3 -5,-0.4 -1,-0.2 0.932 110.7 42.6 -61.5 -47.3 3.3 3.5 10.0 42 349 A A H X S+ 0 0 2 -4,-1.8 4,-1.3 1,-0.2 5,-0.3 0.906 116.3 48.0 -65.7 -43.4 2.8 -0.3 10.5 43 350 A A H X S+ 0 0 32 -4,-2.3 4,-3.0 1,-0.2 -2,-0.2 0.875 107.4 56.4 -65.2 -38.3 6.4 -0.8 11.8 44 351 A Q H < S+ 0 0 137 -4,-2.8 -1,-0.2 2,-0.2 -2,-0.2 0.827 101.0 60.5 -62.6 -33.2 6.0 2.2 14.2 45 352 A T H < S+ 0 0 102 -4,-1.3 -2,-0.2 -3,-0.2 -1,-0.2 0.978 119.9 22.2 -59.1 -60.6 3.0 0.5 15.7 46 353 A V H < S- 0 0 57 -4,-1.3 2,-0.9 1,-0.1 -2,-0.2 0.867 87.9-157.1 -76.2 -38.8 4.7 -2.7 16.9 47 354 A G S < S+ 0 0 58 -4,-3.0 -1,-0.1 -5,-0.3 2,-0.1 -0.310 76.4 7.3 91.6 -51.2 8.2 -1.2 17.0 48 355 A N S S+ 0 0 145 -2,-0.9 -4,-0.0 -3,-0.1 -5,-0.0 -0.525 94.4 95.2-166.7 89.5 10.0 -4.5 16.6 49 356 A T S S+ 0 0 90 -2,-0.1 3,-0.2 2,-0.1 -6,-0.0 0.450 83.0 41.9-140.6 -62.1 8.0 -7.7 16.0 50 357 A Y S S- 0 0 34 1,-0.2 39,-1.3 40,-0.1 2,-0.9 0.878 78.5-179.3 -63.7 -39.1 7.8 -8.8 12.4 51 358 A G + 0 0 49 37,-0.1 2,-1.0 1,-0.1 -1,-0.2 -0.643 66.7 21.5 78.9-105.5 11.4 -7.9 11.7 52 359 A N S S+ 0 0 140 -2,-0.9 2,-0.2 37,-0.3 -1,-0.1 -0.617 85.2 164.2 -99.8 73.4 12.1 -8.6 8.1 53 360 A F - 0 0 29 -2,-1.0 2,-0.4 35,-0.2 33,-0.1 -0.618 29.0-138.7 -91.2 150.5 8.6 -8.5 6.6 54 361 A S - 0 0 42 -2,-0.2 33,-1.1 2,-0.0 2,-0.4 -0.921 10.7-151.5-112.1 132.3 7.8 -8.2 2.9 55 362 A L E +D 86 0C 11 -2,-0.4 9,-0.5 31,-0.2 2,-0.3 -0.863 26.3 152.4-105.6 135.6 5.0 -6.0 1.6 56 363 A A E -D 85 0C 7 29,-0.6 29,-1.3 -2,-0.4 2,-0.1 -0.975 39.3-103.0-154.0 163.5 3.2 -6.8 -1.7 57 364 A T E -D 84 0C 15 -2,-0.3 6,-0.3 27,-0.2 27,-0.2 -0.457 25.2-124.7 -88.3 163.2 -0.2 -6.2 -3.4 58 365 A M S S+ 0 0 86 25,-0.8 -1,-0.1 1,-0.3 26,-0.1 0.981 80.4 61.5 -70.0 -59.1 -3.0 -8.9 -3.8 59 366 A F S S+ 0 0 172 1,-0.3 -1,-0.3 24,-0.1 24,-0.1 -0.964 113.1 0.7-132.5 148.3 -3.3 -8.7 -7.6 60 367 A P S S- 0 0 93 0, 0.0 -1,-0.3 0, 0.0 -2,-0.1 -0.867 91.7-134.3 -87.8 31.6 -1.8 -9.2 -10.0 61 368 A R + 0 0 189 1,-0.1 -3,-0.1 2,-0.0 -2,-0.1 0.988 46.4 150.9 57.3 82.5 0.9 -10.1 -7.5 62 369 A R - 0 0 142 1,-0.1 -1,-0.1 -3,-0.1 -4,-0.1 0.313 47.8-128.0-121.3 3.0 4.0 -8.3 -8.8 63 370 A E - 0 0 128 -6,-0.3 2,-0.4 1,-0.1 -7,-0.1 0.184 25.4 -87.8 66.7 166.8 5.9 -7.8 -5.5 64 371 A F - 0 0 38 -9,-0.5 2,-0.2 -7,-0.0 -9,-0.1 -0.934 36.8-163.1-117.5 138.0 7.2 -4.4 -4.3 65 372 A T >> - 0 0 88 -2,-0.4 4,-1.0 1,-0.0 3,-0.7 -0.598 41.0 -95.3-110.5 173.0 10.7 -2.9 -5.0 66 373 A K H 3> S+ 0 0 190 1,-0.3 4,-1.7 -2,-0.2 3,-0.3 0.805 126.6 55.0 -56.9 -30.0 12.7 -0.1 -3.4 67 374 A E H 3> S+ 0 0 132 1,-0.2 4,-2.0 2,-0.2 -1,-0.3 0.822 97.7 62.3 -73.0 -32.7 11.3 2.2 -6.1 68 375 A D H <4 S+ 0 0 15 -3,-0.7 -33,-0.3 1,-0.2 -1,-0.2 0.795 108.3 43.4 -63.1 -29.7 7.7 1.3 -5.1 69 376 A Y H < S+ 0 0 19 -4,-1.0 -33,-1.6 -3,-0.3 -34,-1.2 0.932 112.0 49.1 -81.3 -51.3 8.3 2.8 -1.6 70 377 A K H < S+ 0 0 138 -4,-1.7 -2,-0.2 -35,-0.2 -3,-0.1 0.837 107.5 68.4 -57.5 -35.8 10.1 6.0 -2.6 71 378 A K S < S- 0 0 38 -4,-2.0 -36,-2.2 1,-0.2 -35,-0.3 -0.084 98.0 -82.1 -76.5-179.0 7.4 6.8 -5.2 72 379 A K B -C 34 0B 76 -38,-0.2 4,-0.2 -37,-0.1 -37,-0.2 -0.102 33.9-115.2 -77.1 179.0 3.8 7.7 -4.5 73 380 A L S > S+ 0 0 0 -40,-0.9 3,-2.2 -43,-0.6 -42,-0.2 0.956 110.9 49.7 -82.1 -58.2 0.9 5.4 -3.7 74 381 A L G > S+ 0 0 56 -44,-0.3 3,-3.0 1,-0.3 -1,-0.1 0.680 89.0 88.2 -56.7 -16.0 -1.5 5.9 -6.7 75 382 A D G 3 S+ 0 0 73 1,-0.3 -1,-0.3 -44,-0.2 -2,-0.1 0.817 97.5 36.5 -52.1 -30.9 1.7 5.3 -8.9 76 383 A L G < S- 0 0 21 -3,-2.2 -1,-0.3 -4,-0.2 -2,-0.2 0.006 130.4 -95.9-110.2 25.3 0.8 1.6 -8.7 77 384 A E S < S+ 0 0 142 -3,-3.0 -3,-0.2 -46,-0.1 -2,-0.1 0.993 70.2 150.4 58.5 70.7 -3.0 2.2 -8.9 78 385 A L + 0 0 6 4,-0.1 -64,-0.7 -47,-0.1 -4,-0.1 0.674 31.3 130.7-102.1 -23.4 -3.9 2.2 -5.1 79 386 A A S S+ 0 0 28 1,-0.3 -66,-0.2 -66,-0.2 -64,-0.0 -0.570 70.2 6.7 -83.0 144.8 -6.9 4.5 -5.3 80 387 A P S S- 0 0 106 0, 0.0 2,-0.3 0, 0.0 -1,-0.3 -0.994 136.5 -9.8 -88.4 -3.0 -9.5 4.3 -4.2 81 388 A S + 0 0 61 -68,-0.1 2,-0.3 -4,-0.1 -66,-0.2 -0.992 59.2 173.1-153.6 144.6 -8.7 1.1 -2.4 82 389 A A E -b 15 0A 19 -68,-1.3 -66,-1.3 -2,-0.3 2,-0.4 -0.955 18.5-137.1-147.3 164.0 -5.8 -1.4 -2.2 83 390 A S E -b 16 0A 19 -2,-0.3 -25,-0.8 -68,-0.2 2,-0.2 -0.965 13.8-161.1-128.8 144.2 -4.6 -4.5 -0.3 84 391 A V E -D 57 0C 15 -68,-1.9 2,-0.4 -2,-0.4 -27,-0.2 -0.742 9.4-141.6-118.5 167.8 -1.2 -5.5 1.1 85 392 A V E -D 56 0C 32 -29,-1.3 -29,-0.6 -2,-0.2 2,-0.4 -0.973 11.7-144.8-135.2 119.1 0.5 -8.7 2.2 86 393 A L E -D 55 0C 21 -2,-0.4 -31,-0.2 -31,-0.2 -67,-0.1 -0.689 12.9-175.5 -85.6 130.6 2.9 -9.0 5.2 87 394 A L - 0 0 88 -33,-1.1 -32,-0.1 -2,-0.4 -1,-0.1 -0.358 16.0-174.9-120.3 51.0 5.7 -11.5 4.8 88 395 A P - 0 0 36 0, 0.0 2,-0.4 0, 0.0 -35,-0.2 0.039 22.9-136.8 -44.3 153.2 7.4 -11.3 8.3 89 396 A A 0 0 70 -39,-1.3 -37,-0.3 -36,-0.0 -36,-0.1 -0.592 360.0 360.0-116.7 68.0 10.6 -13.3 8.9 90 397 A G 0 0 122 -2,-0.4 -40,-0.1 -39,-0.1 -39,-0.1 -0.738 360.0 360.0 130.8 360.0 10.1 -14.8 12.4