==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 06-FEB-02 1KZ0 . COMPND 2 MOLECULE: ANTENNAPEDIA PROTEIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR A.CZAJLIK,E.MESKO,B.PENKE,A.PERCZEL . 16 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2019.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 6 37.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 6.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 6.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 4 25.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A R 0 0 247 0, 0.0 2,-0.1 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0-164.9 3.6 14.8 -4.3 2 2 A Q + 0 0 125 1,-0.1 0, 0.0 2,-0.1 0, 0.0 -0.349 360.0 98.6-126.9-152.6 2.2 11.4 -3.6 3 3 A I + 0 0 95 -2,-0.1 -1,-0.1 1,-0.0 0, 0.0 0.852 67.7 99.2 69.3 37.8 3.0 7.7 -4.2 4 4 A K S S- 0 0 118 -3,-0.1 -2,-0.1 0, 0.0 -1,-0.0 0.722 106.5 -4.8-115.2 -48.1 4.4 7.2 -0.7 5 5 A I S > S+ 0 0 91 3,-0.1 4,-3.0 2,-0.0 5,-0.3 0.465 110.8 99.1-121.5 -12.3 1.5 5.7 1.2 6 6 A W H >> S+ 0 0 90 2,-0.3 3,-2.5 1,-0.2 4,-1.3 0.896 99.3 16.7 -41.2 -98.3 -1.1 5.8 -1.5 7 7 A F H 3> S+ 0 0 60 1,-0.3 4,-1.1 2,-0.2 -1,-0.2 0.693 120.8 71.2 -56.9 -9.4 -1.2 2.4 -3.1 8 8 A Q H 3> S+ 0 0 68 2,-0.3 4,-3.9 1,-0.2 -1,-0.3 0.897 97.7 47.3 -72.3 -35.7 0.6 1.5 0.1 9 9 A N H << S+ 0 0 82 -4,-3.0 4,-0.4 -3,-2.5 -2,-0.2 0.791 117.2 41.7 -74.4 -22.3 -2.7 2.1 1.8 10 10 A R H < S+ 0 0 169 -4,-1.3 -2,-0.3 -5,-0.3 -1,-0.2 0.624 114.8 54.5 -93.1 -15.6 -4.2 -0.0 -1.0 11 11 A R H < S+ 0 0 111 -4,-1.1 3,-0.4 -5,-0.4 -2,-0.2 0.902 96.6 60.8 -81.5 -45.4 -1.2 -2.3 -0.5 12 12 A M S < S+ 0 0 117 -4,-3.9 2,-1.8 1,-0.3 -1,-0.2 0.860 93.4 70.9 -50.7 -30.3 -1.8 -2.8 3.2 13 13 A K S S+ 0 0 128 -4,-0.4 -1,-0.3 -5,-0.2 2,-0.1 -0.214 87.5 108.4 -78.6 45.4 -5.1 -4.2 1.9 14 14 A W S S- 0 0 128 -2,-1.8 -3,-0.1 -3,-0.4 -2,-0.1 -0.370 75.4-125.7-113.4-165.3 -3.2 -7.2 0.6 15 15 A K 0 0 167 -2,-0.1 -3,-0.1 1,-0.1 -2,-0.1 0.132 360.0 360.0-127.2 13.4 -2.6 -10.9 1.3 16 16 A K 0 0 223 -4,-0.0 -1,-0.1 0, 0.0 -4,-0.0 0.856 360.0 360.0 -47.8 360.0 1.2 -10.8 1.5