==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-FEB-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTON TRANSPORT 14-JUN-10 2KZ9 . COMPND 2 MOLECULE: V-TYPE PROTON ATPASE SUBUNIT E; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR N.SANKARANARAYANAN,G.GRUBER . 69 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7491.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 56 81.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 56 81.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 222 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 32.7 7.3 37.9 -27.6 2 2 A A + 0 0 97 1,-0.1 3,-0.2 2,-0.0 0, 0.0 0.791 360.0 114.5 53.2 28.6 4.2 40.2 -27.5 3 3 A S + 0 0 72 1,-0.1 -1,-0.1 2,-0.1 3,-0.1 -0.006 29.5 111.5-115.7 26.5 5.5 41.3 -24.1 4 4 A A S S+ 0 0 96 1,-0.2 -1,-0.1 2,-0.1 -2,-0.0 0.837 71.5 61.8 -68.2 -33.5 6.3 44.9 -25.2 5 5 A I S S- 0 0 113 -3,-0.2 -1,-0.2 1,-0.1 -2,-0.1 0.896 74.9-174.4 -59.6 -42.0 3.4 46.2 -22.9 6 6 A T + 0 0 103 1,-0.1 -1,-0.1 -3,-0.1 -2,-0.1 0.810 58.1 98.9 48.0 32.3 5.1 44.8 -19.8 7 7 A A + 0 0 75 3,-0.0 -1,-0.1 1,-0.0 -4,-0.0 0.606 69.4 57.1-116.7 -25.6 2.0 45.8 -18.0 8 8 A L S S+ 0 0 124 1,-0.2 -2,-0.1 2,-0.0 -1,-0.0 0.026 102.0 62.1 -96.2 26.3 0.1 42.5 -17.8 9 9 A T + 0 0 75 -4,-0.1 -1,-0.2 -6,-0.0 -6,-0.0 -0.438 68.4 167.9-150.9 68.4 3.1 40.9 -16.0 10 10 A P > - 0 0 76 0, 0.0 4,-0.6 0, 0.0 -3,-0.0 0.105 48.7-103.2 -69.8-171.5 3.8 42.5 -12.6 11 11 A N H > S+ 0 0 119 2,-0.2 4,-2.6 1,-0.1 5,-0.3 0.754 112.7 68.9 -87.8 -28.0 6.1 41.2 -9.9 12 12 A Q H > S+ 0 0 139 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.910 102.1 45.7 -56.5 -45.2 3.2 40.0 -7.7 13 13 A V H > S+ 0 0 57 2,-0.2 4,-2.3 3,-0.2 -1,-0.2 0.869 111.7 53.5 -66.7 -37.7 2.4 37.3 -10.2 14 14 A N H X S+ 0 0 98 -4,-0.6 4,-2.1 2,-0.2 -2,-0.2 0.980 115.1 37.0 -61.1 -59.7 6.0 36.3 -10.5 15 15 A D H X S+ 0 0 77 -4,-2.6 4,-2.4 1,-0.2 5,-0.4 0.910 115.0 56.8 -59.8 -44.2 6.7 35.8 -6.8 16 16 A E H X S+ 0 0 114 -4,-2.4 4,-2.4 -5,-0.3 -1,-0.2 0.920 111.6 41.8 -53.7 -48.0 3.3 34.3 -6.3 17 17 A L H X S+ 0 0 95 -4,-2.3 4,-2.8 3,-0.2 5,-0.3 0.831 110.8 59.7 -69.5 -32.6 3.9 31.6 -8.9 18 18 A N H X S+ 0 0 103 -4,-2.1 4,-2.3 -5,-0.2 -2,-0.2 0.979 115.8 30.0 -59.3 -60.1 7.4 31.1 -7.6 19 19 A K H X S+ 0 0 119 -4,-2.4 4,-3.2 2,-0.2 5,-0.2 0.934 121.5 52.8 -66.2 -47.6 6.4 30.2 -4.0 20 20 A M H X S+ 0 0 120 -4,-2.4 4,-2.4 -5,-0.4 5,-0.2 0.942 113.7 42.5 -53.2 -53.4 3.1 28.6 -5.1 21 21 A Q H X S+ 0 0 129 -4,-2.8 4,-2.2 1,-0.2 -1,-0.2 0.916 114.5 51.5 -60.7 -45.1 4.8 26.4 -7.7 22 22 A A H X S+ 0 0 53 -4,-2.3 4,-2.4 -5,-0.3 5,-0.2 0.921 110.7 48.1 -58.4 -46.8 7.7 25.5 -5.3 23 23 A F H X S+ 0 0 166 -4,-3.2 4,-2.6 1,-0.2 5,-0.2 0.921 114.1 45.8 -60.8 -45.9 5.2 24.5 -2.6 24 24 A I H X S+ 0 0 98 -4,-2.4 4,-2.2 -5,-0.2 -1,-0.2 0.801 110.9 55.6 -67.7 -29.2 3.2 22.4 -5.0 25 25 A R H X S+ 0 0 172 -4,-2.2 4,-2.4 -5,-0.2 -2,-0.2 0.938 113.2 38.3 -68.9 -48.6 6.4 20.9 -6.3 26 26 A K H X S+ 0 0 168 -4,-2.4 4,-3.1 2,-0.2 5,-0.3 0.914 118.9 48.4 -68.9 -44.1 7.7 19.7 -2.9 27 27 A E H X S+ 0 0 140 -4,-2.6 4,-2.5 -5,-0.2 5,-0.2 0.914 115.3 44.7 -62.5 -44.5 4.2 18.7 -1.7 28 28 A A H X S+ 0 0 56 -4,-2.2 4,-2.5 -5,-0.2 -2,-0.2 0.927 116.9 44.8 -66.0 -46.4 3.6 16.8 -5.0 29 29 A E H X S+ 0 0 133 -4,-2.4 4,-2.4 -5,-0.2 -2,-0.2 0.934 115.5 47.1 -63.8 -47.8 7.0 15.1 -5.0 30 30 A E H X S+ 0 0 127 -4,-3.1 4,-2.5 2,-0.2 -2,-0.2 0.930 114.0 47.4 -59.9 -47.8 6.9 14.2 -1.3 31 31 A K H X S+ 0 0 144 -4,-2.5 4,-2.6 -5,-0.3 5,-0.3 0.914 111.9 50.4 -60.5 -44.6 3.4 12.8 -1.6 32 32 A A H X S+ 0 0 58 -4,-2.5 4,-2.4 1,-0.2 -1,-0.2 0.893 111.4 48.6 -61.2 -41.4 4.3 10.8 -4.7 33 33 A K H X S+ 0 0 139 -4,-2.4 4,-3.2 2,-0.2 5,-0.3 0.906 111.5 49.4 -65.7 -42.9 7.4 9.4 -2.9 34 34 A E H X S+ 0 0 85 -4,-2.5 4,-2.1 2,-0.2 -2,-0.2 0.934 116.8 40.5 -62.2 -48.0 5.4 8.4 0.2 35 35 A I H X S+ 0 0 87 -4,-2.6 4,-2.4 2,-0.2 5,-0.2 0.837 117.3 50.3 -69.9 -33.5 2.7 6.7 -1.8 36 36 A Q H X S+ 0 0 120 -4,-2.4 4,-2.3 -5,-0.3 -2,-0.2 0.929 115.5 40.4 -70.4 -46.9 5.2 5.2 -4.2 37 37 A L H X S+ 0 0 65 -4,-3.2 4,-2.1 2,-0.2 -2,-0.2 0.834 117.5 50.5 -70.8 -33.2 7.4 3.8 -1.4 38 38 A K H X S+ 0 0 112 -4,-2.1 4,-2.4 -5,-0.3 -2,-0.2 0.933 115.1 40.9 -70.1 -47.6 4.4 2.7 0.6 39 39 A A H X S+ 0 0 38 -4,-2.4 4,-2.1 2,-0.2 -2,-0.2 0.905 118.4 47.1 -67.3 -42.9 2.7 0.9 -2.3 40 40 A D H X S+ 0 0 88 -4,-2.3 4,-2.4 -5,-0.2 5,-0.2 0.907 114.5 46.9 -65.6 -43.1 6.0 -0.6 -3.5 41 41 A Q H X S+ 0 0 121 -4,-2.1 4,-2.5 2,-0.2 5,-0.2 0.919 115.7 44.5 -65.3 -45.0 7.0 -1.7 0.0 42 42 A E H X S+ 0 0 125 -4,-2.4 4,-2.2 2,-0.2 5,-0.2 0.832 113.6 52.0 -68.5 -32.8 3.5 -3.2 0.8 43 43 A Y H X S+ 0 0 174 -4,-2.1 4,-2.4 -5,-0.2 -2,-0.2 0.910 113.3 42.7 -70.0 -43.6 3.5 -4.8 -2.6 44 44 A E H X S+ 0 0 123 -4,-2.4 4,-2.6 2,-0.2 5,-0.2 0.931 117.8 45.2 -68.5 -47.1 6.9 -6.5 -2.2 45 45 A I H X S+ 0 0 102 -4,-2.5 4,-2.3 -5,-0.2 -2,-0.2 0.917 116.2 46.3 -63.0 -45.0 6.2 -7.5 1.4 46 46 A E H X S+ 0 0 96 -4,-2.2 4,-2.5 -5,-0.2 5,-0.2 0.934 113.4 48.5 -63.6 -47.8 2.8 -8.8 0.6 47 47 A K H X S+ 0 0 139 -4,-2.4 4,-2.6 1,-0.2 5,-0.2 0.927 113.9 46.3 -58.5 -47.4 4.0 -10.7 -2.5 48 48 A T H X S+ 0 0 56 -4,-2.6 4,-2.8 1,-0.2 5,-0.2 0.880 111.2 53.1 -63.5 -39.1 6.8 -12.3 -0.6 49 49 A N H X S+ 0 0 94 -4,-2.3 4,-2.5 -5,-0.2 -2,-0.2 0.921 112.4 43.6 -62.7 -45.4 4.5 -13.2 2.3 50 50 A I H X S+ 0 0 99 -4,-2.5 4,-2.6 2,-0.2 -2,-0.2 0.916 116.3 46.8 -66.5 -44.6 2.1 -15.0 -0.0 51 51 A V H X S+ 0 0 67 -4,-2.6 4,-2.5 -5,-0.2 -2,-0.2 0.894 114.7 47.4 -64.6 -41.0 4.8 -16.7 -2.0 52 52 A R H X S+ 0 0 188 -4,-2.8 4,-2.5 -5,-0.2 5,-0.2 0.933 114.6 45.1 -66.3 -47.5 6.6 -17.8 1.2 53 53 A N H X S+ 0 0 96 -4,-2.5 4,-2.2 -5,-0.2 -2,-0.2 0.896 115.4 48.1 -63.6 -41.4 3.4 -19.1 2.8 54 54 A E H X S+ 0 0 111 -4,-2.6 4,-2.7 -5,-0.2 5,-0.3 0.927 112.7 47.6 -65.3 -46.4 2.3 -20.8 -0.3 55 55 A T H X S+ 0 0 79 -4,-2.5 4,-2.5 1,-0.2 5,-0.2 0.912 114.7 46.1 -61.6 -44.2 5.8 -22.5 -0.9 56 56 A N H X S+ 0 0 110 -4,-2.5 4,-2.5 2,-0.2 -1,-0.2 0.873 113.0 51.2 -66.9 -38.0 5.9 -23.6 2.8 57 57 A N H X S+ 0 0 81 -4,-2.2 4,-2.5 -5,-0.2 -2,-0.2 0.970 115.5 39.0 -63.7 -55.8 2.4 -24.9 2.6 58 58 A I H X S+ 0 0 78 -4,-2.7 4,-2.7 1,-0.2 5,-0.3 0.912 118.2 49.8 -61.5 -44.1 2.8 -27.0 -0.5 59 59 A D H X S+ 0 0 90 -4,-2.5 4,-2.3 -5,-0.3 -1,-0.2 0.897 113.4 46.3 -62.3 -41.7 6.3 -28.1 0.6 60 60 A G H X S+ 0 0 25 -4,-2.5 4,-2.4 -5,-0.2 -1,-0.2 0.871 113.3 48.8 -69.5 -37.5 5.0 -29.1 4.0 61 61 A N H X S+ 0 0 81 -4,-2.5 4,-2.4 2,-0.2 -2,-0.2 0.926 116.6 41.2 -67.9 -46.1 2.0 -30.9 2.6 62 62 A F H X S+ 0 0 134 -4,-2.7 4,-2.4 2,-0.2 5,-0.2 0.887 117.3 48.5 -68.9 -40.0 4.0 -32.9 0.0 63 63 A K H X S+ 0 0 125 -4,-2.3 4,-2.4 -5,-0.3 -2,-0.2 0.903 115.0 44.5 -67.0 -42.3 6.8 -33.5 2.5 64 64 A S H X S+ 0 0 64 -4,-2.4 4,-2.8 2,-0.2 5,-0.3 0.911 115.2 47.7 -68.7 -43.8 4.4 -34.7 5.2 65 65 A K H X S+ 0 0 145 -4,-2.4 4,-2.6 -5,-0.2 -2,-0.2 0.901 115.0 46.1 -64.1 -42.0 2.4 -36.8 2.8 66 66 A L H < S+ 0 0 134 -4,-2.4 -2,-0.2 2,-0.2 -1,-0.2 0.930 115.6 45.1 -66.9 -46.8 5.6 -38.4 1.4 67 67 A K H < S+ 0 0 174 -4,-2.4 -2,-0.2 -5,-0.2 -1,-0.2 0.922 117.3 44.6 -63.2 -45.6 7.1 -39.0 4.8 68 68 A K H < 0 0 190 -4,-2.8 -2,-0.2 1,-0.2 -1,-0.2 0.913 360.0 360.0 -65.7 -43.7 3.9 -40.4 6.2 69 69 A A < 0 0 118 -4,-2.6 -1,-0.2 -5,-0.3 -2,-0.2 0.880 360.0 360.0 -54.9 360.0 3.2 -42.5 3.1