==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-JAN-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 25-JUN-10 2KZV . COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: CHROMOBACTERIUM VIOLACEUM; . AUTHOR Y.YANG,T.A.RAMELOT,D.WANG,C.CICCOSANTI,L.MAO,H.JANJUA,T.B.AC . 92 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7436.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 62.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 11 12.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 10.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 9.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 27 29.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 200 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 51.0 -21.7 -11.4 0.4 2 2 A P - 0 0 101 0, 0.0 2,-0.4 0, 0.0 38,-0.1 -0.294 360.0-131.3 -62.6 144.4 -18.2 -10.0 1.0 3 3 A H - 0 0 124 36,-0.4 2,-2.1 2,-0.1 0, 0.0 -0.843 67.8 -37.7-101.7 133.4 -16.0 -9.3 -2.1 4 4 A K S S+ 0 0 108 -2,-0.4 2,-3.2 1,-0.1 36,-0.1 -0.258 77.3 155.3 54.2 -80.6 -12.5 -10.7 -2.3 5 5 A E - 0 0 64 -2,-2.1 -1,-0.1 34,-0.2 35,-0.1 -0.284 26.7-169.5 60.9 -72.4 -11.8 -10.0 1.5 6 6 A K - 0 0 70 -2,-3.2 -1,-0.1 1,-0.1 6,-0.1 0.861 21.4-141.9 54.1 108.5 -9.1 -12.7 1.6 7 7 A H S S+ 0 0 179 5,-0.1 2,-0.1 4,-0.0 -1,-0.1 0.924 79.7 86.9 -66.9 -42.4 -8.0 -13.4 5.2 8 8 A P S > S- 0 0 65 0, 0.0 4,-2.3 0, 0.0 5,-0.2 -0.371 70.2-149.8 -60.7 126.7 -4.3 -13.9 4.2 9 9 A L H > S+ 0 0 82 2,-0.2 4,-3.3 1,-0.2 5,-0.4 0.927 94.7 57.3 -65.3 -42.3 -2.5 -10.5 4.2 10 10 A Q H > S+ 0 0 65 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.962 113.6 37.4 -55.2 -53.0 -0.1 -11.7 1.5 11 11 A D H > S+ 0 0 81 2,-0.2 4,-2.6 1,-0.2 5,-0.2 0.908 116.6 54.2 -67.1 -39.4 -2.9 -12.5 -1.0 12 12 A M H X S+ 0 0 20 -4,-2.3 4,-1.8 1,-0.2 -2,-0.2 0.964 114.3 39.2 -61.1 -50.1 -5.0 -9.5 0.2 13 13 A F H X S+ 0 0 3 -4,-3.3 4,-2.8 1,-0.2 5,-0.3 0.906 114.1 56.0 -67.5 -38.3 -2.1 -7.0 -0.5 14 14 A T H X S+ 0 0 43 -4,-2.3 4,-2.4 -5,-0.4 5,-0.3 0.947 108.0 47.4 -60.1 -46.5 -1.1 -8.8 -3.7 15 15 A S H X S+ 0 0 33 -4,-2.6 4,-1.9 1,-0.2 -1,-0.2 0.926 114.3 46.7 -62.4 -43.1 -4.6 -8.5 -5.1 16 16 A A H X S+ 0 0 0 -4,-1.8 4,-1.7 -5,-0.2 -2,-0.2 0.929 113.2 48.2 -66.8 -43.1 -4.8 -4.8 -4.3 17 17 A I H X S+ 0 0 16 -4,-2.8 4,-0.6 1,-0.2 -2,-0.2 0.939 114.1 46.0 -63.9 -44.8 -1.3 -4.0 -5.6 18 18 A E H < S+ 0 0 143 -4,-2.4 3,-0.3 -5,-0.3 4,-0.2 0.870 108.3 57.6 -67.3 -34.1 -2.0 -5.8 -8.9 19 19 A A H < S+ 0 0 38 -4,-1.9 3,-0.3 -5,-0.3 -1,-0.2 0.909 120.2 28.1 -64.2 -39.6 -5.4 -4.1 -9.2 20 20 A V H >< S+ 0 0 30 -4,-1.7 3,-1.9 1,-0.2 4,-0.4 0.322 90.6 102.5-102.9 7.2 -3.8 -0.6 -9.1 21 21 A A T 3X + 0 0 31 -4,-0.6 4,-1.0 -3,-0.3 3,-0.2 0.627 63.8 80.7 -66.0 -7.1 -0.4 -1.7 -10.6 22 22 A R T 34 S+ 0 0 222 -3,-0.3 -1,-0.3 -4,-0.2 -2,-0.1 0.750 77.2 71.1 -71.2 -19.9 -1.7 -0.1 -13.9 23 23 A D T <4 S- 0 0 91 -3,-1.9 -1,-0.2 3,-0.2 -2,-0.2 0.969 131.7 -42.4 -61.3 -51.0 -0.7 3.3 -12.5 24 24 A S T 4 S- 0 0 90 2,-0.7 2,-1.4 -4,-0.4 -2,-0.2 -0.206 81.6 -80.6-179.8 77.1 3.0 2.5 -12.9 25 25 A G S < S+ 0 0 48 -4,-1.0 -1,-0.2 -7,-0.1 -2,-0.2 -0.304 116.4 57.0 56.0 -91.1 4.4 -0.9 -11.9 26 26 A W S S- 0 0 80 -2,-1.4 -2,-0.7 -3,-0.1 2,-0.4 0.175 87.6-123.8 -54.7-174.1 4.5 -0.2 -8.1 27 27 A A - 0 0 2 51,-0.4 51,-0.9 -4,-0.1 2,-0.2 -0.996 14.6-117.0-141.0 134.3 1.3 0.9 -6.2 28 28 A E B > -A 77 0A 63 -2,-0.4 4,-2.0 -8,-0.2 49,-0.2 -0.483 21.4-133.3 -70.4 134.6 0.7 4.0 -4.1 29 29 A L H > S+ 0 0 17 47,-2.7 4,-2.3 1,-0.2 5,-0.2 0.915 107.7 55.6 -56.6 -40.6 -0.1 3.1 -0.5 30 30 A S H > S+ 0 0 89 46,-0.3 4,-2.3 1,-0.2 5,-0.3 0.935 105.9 51.2 -59.3 -43.1 -3.0 5.6 -0.6 31 31 A A H > S+ 0 0 29 1,-0.2 4,-2.7 2,-0.2 -1,-0.2 0.905 108.1 53.0 -62.1 -38.2 -4.4 3.7 -3.6 32 32 A V H X S+ 0 0 1 -4,-2.0 4,-2.9 2,-0.2 5,-0.3 0.951 109.1 48.1 -63.5 -46.9 -4.1 0.4 -1.7 33 33 A G H X S+ 0 0 10 -4,-2.3 4,-2.7 1,-0.2 -2,-0.2 0.960 115.3 44.2 -60.0 -49.1 -6.0 1.7 1.3 34 34 A S H X S+ 0 0 64 -4,-2.3 4,-2.5 -5,-0.2 5,-0.3 0.931 113.9 51.1 -62.4 -42.6 -8.9 3.1 -0.9 35 35 A Y H X S+ 0 0 47 -4,-2.7 4,-3.2 -5,-0.3 5,-0.5 0.958 113.3 44.0 -60.8 -48.6 -8.9 -0.1 -3.0 36 36 A L H X S+ 0 0 2 -4,-2.9 4,-3.1 -5,-0.2 7,-0.4 0.911 110.6 56.6 -64.2 -39.1 -9.2 -2.3 0.1 37 37 A A H < S+ 0 0 39 -4,-2.7 -2,-0.2 -5,-0.3 -1,-0.2 0.957 117.4 33.4 -58.4 -48.6 -11.8 -0.0 1.6 38 38 A K H < S+ 0 0 176 -4,-2.5 -2,-0.2 -5,-0.2 -1,-0.2 0.961 126.9 39.4 -73.2 -51.2 -14.0 -0.4 -1.5 39 39 A N H < S+ 0 0 33 -4,-3.2 -36,-0.4 -5,-0.3 -34,-0.2 0.909 132.5 28.2 -65.4 -40.0 -13.2 -4.0 -2.3 40 40 A D >< + 0 0 5 -4,-3.1 3,-2.6 -5,-0.5 -1,-0.3 -0.754 66.2 179.0-123.9 84.7 -13.1 -5.0 1.4 41 41 A P T 3 S+ 0 0 98 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 0.808 81.5 68.3 -55.3 -28.5 -15.5 -2.7 3.4 42 42 A S T 3 S+ 0 0 75 -3,-0.1 2,-0.5 -6,-0.1 -5,-0.1 0.664 77.2 103.3 -67.5 -11.8 -14.5 -4.6 6.5 43 43 A F < - 0 0 29 -3,-2.6 3,-0.1 -7,-0.4 -3,-0.0 -0.598 52.9-173.5 -75.7 122.6 -11.0 -3.1 6.1 44 44 A D >> + 0 0 54 -2,-0.5 3,-1.1 1,-0.1 4,-0.8 -0.803 13.7 177.6-119.6 90.1 -10.6 -0.2 8.7 45 45 A P T 34 S+ 0 0 46 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 0.757 78.9 72.1 -63.3 -20.3 -7.3 1.7 8.2 46 46 A R T >4 S+ 0 0 213 1,-0.2 3,-1.7 2,-0.2 4,-0.1 0.902 90.8 56.4 -62.7 -38.9 -8.5 4.0 11.1 47 47 A N T <4 S+ 0 0 134 -3,-1.1 -1,-0.2 1,-0.3 3,-0.1 0.909 107.6 48.0 -61.3 -38.0 -7.8 1.1 13.5 48 48 A W T 3< S- 0 0 142 -4,-0.8 -1,-0.3 1,-0.1 -2,-0.2 0.357 121.1-116.9 -84.0 9.8 -4.2 1.0 12.2 49 49 A G < - 0 0 21 -3,-1.7 4,-0.3 3,-0.1 2,-0.2 0.321 35.8 -73.9 69.2 151.5 -4.0 4.8 12.6 50 50 A H S S+ 0 0 188 1,-0.2 2,-1.9 2,-0.2 -4,-0.0 -0.517 115.3 5.1 -79.2 147.7 -3.5 7.1 9.6 51 51 A G S >> S+ 0 0 42 1,-0.2 3,-1.3 -2,-0.2 4,-0.6 -0.010 111.0 87.4 72.1 -40.0 -0.0 7.3 8.0 52 52 A R H 3> + 0 0 183 -2,-1.9 4,-1.8 1,-0.3 -1,-0.2 0.614 66.6 85.0 -67.4 -4.9 1.0 4.5 10.4 53 53 A L H 3> S+ 0 0 19 -4,-0.3 4,-1.8 1,-0.2 -1,-0.3 0.926 85.2 53.4 -62.7 -40.8 -0.2 2.1 7.7 54 54 A S H <> S+ 0 0 4 -3,-1.3 4,-1.2 1,-0.2 -1,-0.2 0.931 109.5 47.6 -60.5 -42.8 3.1 2.4 6.0 55 55 A Q H X S+ 0 0 86 -4,-0.6 4,-0.9 1,-0.2 -1,-0.2 0.815 104.8 62.5 -69.1 -27.1 4.9 1.4 9.2 56 56 A M H >< S+ 0 0 28 -4,-1.8 3,-1.0 1,-0.2 -2,-0.2 0.962 106.5 42.0 -63.9 -48.7 2.4 -1.5 9.6 57 57 A V H >< S+ 0 0 0 -4,-1.8 3,-1.8 1,-0.2 -1,-0.2 0.781 102.8 71.1 -69.2 -23.1 3.5 -3.2 6.4 58 58 A K H 3< S+ 0 0 121 -4,-1.2 -1,-0.2 1,-0.3 -2,-0.2 0.829 90.3 59.6 -62.8 -28.6 7.2 -2.4 7.3 59 59 A K T << S+ 0 0 174 -3,-1.0 2,-0.7 -4,-0.9 -1,-0.3 0.564 89.8 86.2 -77.5 -4.1 6.9 -5.1 10.1 60 60 A L X - 0 0 37 -3,-1.8 3,-1.1 -4,-0.2 -1,-0.1 -0.842 60.7-168.2 -99.9 109.8 6.1 -7.6 7.3 61 61 A D T 3 S+ 0 0 130 -2,-0.7 -1,-0.2 1,-0.3 -2,-0.0 0.887 83.6 65.9 -64.5 -39.4 9.4 -9.1 5.9 62 62 A F T 3 S+ 0 0 71 18,-0.1 19,-1.3 2,-0.0 2,-0.4 0.298 97.3 70.4 -70.3 19.3 7.6 -10.7 2.9 63 63 A L E < S-B 80 0A 6 -3,-1.1 2,-0.4 17,-0.2 17,-0.2 -0.983 75.6-142.4-138.1 126.6 6.8 -7.2 1.7 64 64 A T E -B 79 0A 31 15,-1.8 15,-1.5 -2,-0.4 2,-0.5 -0.732 17.5-160.5 -88.6 131.0 9.3 -4.6 0.3 65 65 A V E +B 78 0A 32 -2,-0.4 2,-0.3 13,-0.2 13,-0.2 -0.940 17.4 163.1-115.6 130.7 8.5 -1.0 1.3 66 66 A Q E -B 77 0A 89 11,-1.7 11,-2.1 -2,-0.5 2,-0.6 -0.979 32.6-128.2-142.3 153.7 10.0 2.0 -0.6 67 67 A E E -B 76 0A 102 -2,-0.3 9,-0.2 9,-0.2 2,-0.2 -0.902 21.4-152.6-107.5 119.1 9.1 5.8 -0.7 68 68 A S E -B 75 0A 50 7,-2.2 7,-1.5 -2,-0.6 2,-1.4 -0.535 23.5-115.9 -85.5 155.9 8.6 7.3 -4.2 69 69 A R E +B 74 0A 236 5,-0.2 2,-0.9 -2,-0.2 5,-0.2 -0.637 42.2 173.3 -92.8 83.2 9.3 11.0 -4.8 70 70 A N E > -B 73 0A 67 -2,-1.4 3,-1.4 3,-0.7 -2,-0.0 -0.776 59.0 -59.7 -94.0 104.9 5.8 12.2 -5.7 71 71 A G T 3 S- 0 0 71 -2,-0.9 0, 0.0 1,-0.2 0, 0.0 -0.278 107.5 -32.2 58.2-142.1 5.8 16.0 -5.9 72 72 A S T 3 S+ 0 0 126 2,-0.1 2,-0.4 -3,-0.0 -1,-0.2 0.550 129.3 77.0 -86.6 -6.4 7.0 17.7 -2.7 73 73 A K E < S- B 0 70A 146 -3,-1.4 -3,-0.7 -4,-0.0 2,-0.6 -0.836 80.0-130.4-106.1 142.1 5.3 14.9 -0.6 74 74 A L E - B 0 69A 135 -2,-0.4 2,-0.4 -5,-0.2 -5,-0.2 -0.783 22.4-156.1 -91.6 123.4 6.9 11.4 -0.2 75 75 A H E - B 0 68A 54 -7,-1.5 -7,-2.2 -2,-0.6 2,-0.2 -0.830 13.2-128.0-101.9 135.6 4.4 8.6 -1.0 76 76 A S E - B 0 67A 26 -2,-0.4 -47,-2.7 -9,-0.2 2,-0.3 -0.522 27.2-170.2 -79.2 148.5 4.8 5.1 0.6 77 77 A E E -AB 28 66A 4 -11,-2.1 -11,-1.7 -49,-0.2 2,-0.3 -0.962 6.8-160.0-137.3 155.0 4.8 2.1 -1.8 78 78 A I E - B 0 65A 0 -51,-0.9 -51,-0.4 -2,-0.3 2,-0.3 -0.961 4.3-171.2-134.5 153.6 4.7 -1.7 -1.3 79 79 A R E - B 0 64A 86 -15,-1.5 -15,-1.8 -2,-0.3 2,-0.6 -0.994 29.5-113.3-143.6 148.8 5.5 -4.7 -3.5 80 80 A L E - B 0 63A 34 -2,-0.3 -17,-0.2 -17,-0.2 -18,-0.1 -0.719 40.6-114.4 -85.8 120.5 5.0 -8.5 -3.1 81 81 A R - 0 0 117 -19,-1.3 -1,-0.1 -2,-0.6 -19,-0.0 -0.258 15.9-144.2 -53.8 132.7 8.4 -10.2 -2.7 82 82 A H S S+ 0 0 157 2,-0.0 -1,-0.2 -3,-0.0 -20,-0.0 0.900 79.3 83.7 -67.7 -39.7 9.0 -12.5 -5.7 83 83 A D S S- 0 0 103 1,-0.1 3,-0.1 3,-0.0 -2,-0.0 -0.340 83.4-124.5 -64.4 145.0 10.8 -15.1 -3.6 84 84 A G - 0 0 49 1,-0.2 2,-0.2 -2,-0.0 -1,-0.1 0.119 53.0 -51.0 -73.7-163.0 8.5 -17.5 -1.8 85 85 A L + 0 0 141 2,-0.0 2,-0.3 -23,-0.0 -1,-0.2 -0.499 63.9 166.8 -73.8 141.3 8.5 -18.0 2.0 86 86 A E + 0 0 148 -2,-0.2 -3,-0.0 -3,-0.1 -1,-0.0 -0.817 23.1 125.1-159.0 114.1 12.0 -18.7 3.5 87 87 A H + 0 0 135 -2,-0.3 5,-0.2 2,-0.1 -1,-0.1 0.140 37.1 114.1-156.1 20.3 13.0 -18.7 7.2 88 88 A H > + 0 0 132 3,-0.1 4,-0.7 2,-0.0 -2,-0.0 0.915 47.7 171.0 -65.7 -40.5 14.5 -22.1 7.8 89 89 A H T 4 - 0 0 114 3,-0.2 -2,-0.1 1,-0.2 0, 0.0 0.134 58.9 -63.6 51.9 179.6 18.0 -20.5 8.4 90 90 A H T 4 S+ 0 0 187 2,-0.2 -1,-0.2 1,-0.1 -2,-0.0 0.907 134.3 57.8 -66.2 -39.6 20.8 -22.8 9.8 91 91 A H T 4 0 0 175 1,-0.3 -2,-0.2 0, 0.0 -1,-0.1 0.978 360.0 360.0 -54.3 -79.1 18.9 -23.4 13.0 92 92 A H < 0 0 184 -4,-0.7 -1,-0.3 -5,-0.2 -3,-0.2 0.179 360.0 360.0 -79.6 360.0 15.6 -24.9 11.7