==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=23-JUL-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSFERASE 30-JUN-10 2L05 . COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE B-RAF; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR J.M.ARAMINI,H.JANJUA,C.CICCOSANTI,R.SHASTRY,Y.J.HUANG,T.B.AC . 86 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6726.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 55 64.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 4.7 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 20 23.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 10.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 11.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 9 10.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 147 A H 0 0 229 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 140.1 9.2 29.1 4.0 2 148 A M - 0 0 157 1,-0.1 3,-0.1 3,-0.0 0, 0.0 -0.957 360.0-103.0-131.8 153.6 8.0 27.7 0.6 3 149 A P - 0 0 116 0, 0.0 -1,-0.1 0, 0.0 2,-0.0 -0.100 56.9 -68.8 -65.5 171.9 4.6 26.1 -0.4 4 150 A K - 0 0 182 1,-0.1 0, 0.0 2,-0.0 0, 0.0 -0.313 43.1-161.0 -63.9 144.8 4.0 22.3 -0.8 5 151 A S + 0 0 93 -3,-0.1 2,-0.2 1,-0.1 -1,-0.1 -0.693 22.2 162.9-132.6 80.8 5.8 20.6 -3.7 6 152 A P + 0 0 100 0, 0.0 2,-0.4 0, 0.0 4,-0.1 -0.096 28.7 133.2 -88.5 37.9 4.3 17.2 -4.6 7 153 A Q + 0 0 167 -2,-0.2 -2,-0.0 2,-0.1 3,-0.0 0.031 46.4 101.1 -80.3 32.7 6.0 17.2 -8.1 8 154 A K S S- 0 0 131 -2,-0.4 2,-0.3 -3,-0.0 17,-0.0 -0.831 86.3 -96.9-113.6 152.5 7.1 13.5 -7.4 9 155 A P - 0 0 73 0, 0.0 16,-2.2 0, 0.0 2,-0.2 -0.541 55.2-173.5 -66.0 130.7 5.5 10.3 -8.7 10 156 A I E -A 24 0A 58 14,-0.3 63,-1.5 -2,-0.3 2,-0.4 -0.788 25.7-135.6-131.0 166.5 3.1 8.9 -6.0 11 157 A V E -A 23 0A 1 12,-2.6 12,-2.0 -2,-0.2 2,-0.8 -0.981 17.4-138.0-124.6 137.5 0.9 6.0 -4.9 12 158 A R E -Ab 22 75A 118 62,-2.0 64,-2.4 -2,-0.4 2,-0.5 -0.818 23.4-174.5-100.5 105.5 -2.6 6.4 -3.5 13 159 A V E -Ab 21 76A 1 8,-2.5 8,-2.8 -2,-0.8 2,-0.6 -0.875 13.6-150.8-107.2 122.9 -3.2 3.9 -0.5 14 160 A F E -Ab 20 77A 64 62,-2.9 64,-2.2 -2,-0.5 6,-0.3 -0.812 16.8-154.4 -93.7 119.3 -6.6 3.6 1.1 15 161 A L E > -A 19 0A 14 4,-1.3 4,-1.3 -2,-0.6 3,-0.2 -0.547 25.1 -90.0 -93.2 155.7 -6.4 2.6 4.8 16 162 A P T 4 S+ 0 0 19 0, 0.0 3,-0.3 0, 0.0 -1,-0.1 -0.127 105.2 41.3 -60.2 159.5 -9.0 0.7 7.0 17 163 A N T 4 S- 0 0 125 1,-0.2 -2,-0.1 2,-0.0 0, 0.0 0.860 136.3 -61.6 64.8 39.2 -11.7 2.6 8.9 18 164 A K T 4 S+ 0 0 200 -3,-0.2 -1,-0.2 1,-0.2 2,-0.2 0.727 102.2 134.5 66.2 27.0 -12.3 5.1 6.0 19 165 A Q E < -A 15 0A 82 -4,-1.3 -4,-1.3 -3,-0.3 2,-0.3 -0.582 29.9-177.4-104.6 166.9 -8.7 6.5 6.1 20 166 A R E -A 14 0A 173 -6,-0.3 2,-0.3 -2,-0.2 -6,-0.2 -0.992 6.9-176.5-159.3 157.2 -6.2 7.2 3.2 21 167 A T E -A 13 0A 46 -8,-2.8 -8,-2.5 -2,-0.3 2,-0.4 -0.987 17.6-136.9-154.3 159.4 -2.7 8.3 2.5 22 168 A V E -A 12 0A 85 -2,-0.3 -10,-0.2 -10,-0.2 -2,-0.0 -0.986 20.0-175.4-124.6 128.7 -0.3 9.2 -0.4 23 169 A V E -A 11 0A 17 -12,-2.0 -12,-2.6 -2,-0.4 2,-0.3 -0.954 31.8-104.9-125.4 142.0 3.4 8.1 -0.6 24 170 A P E -A 10 0A 42 0, 0.0 2,-1.0 0, 0.0 -14,-0.3 -0.469 31.3-127.2 -67.5 123.6 6.1 8.9 -3.2 25 171 A A + 0 0 11 -16,-2.2 2,-0.4 -2,-0.3 42,-0.0 -0.596 38.3 177.0 -73.7 102.8 6.9 6.0 -5.5 26 172 A R > - 0 0 147 -2,-1.0 3,-1.0 3,-0.1 43,-0.7 -0.895 31.9-116.8-112.9 137.8 10.7 5.6 -5.3 27 173 A C T 3 S+ 0 0 116 -2,-0.4 3,-0.1 1,-0.2 -2,-0.0 -0.572 101.3 23.2 -74.2 126.4 12.9 2.9 -7.0 28 174 A G T 3 S+ 0 0 54 -2,-0.4 2,-0.4 1,-0.3 -1,-0.2 -0.021 99.1 104.7 107.7 -28.6 14.6 0.7 -4.4 29 175 A V < - 0 0 36 -3,-1.0 39,-2.6 3,-0.0 40,-0.5 -0.719 66.2-133.3 -89.4 133.6 12.1 1.4 -1.6 30 176 A T B > -E 67 0B 34 -2,-0.4 4,-1.6 37,-0.3 37,-0.3 -0.468 19.8-116.9 -82.5 155.3 9.5 -1.4 -0.7 31 177 A V H > S+ 0 0 3 35,-2.5 4,-2.7 33,-0.3 34,-0.2 0.886 118.3 53.7 -54.7 -39.0 5.8 -0.7 -0.2 32 178 A R H > S+ 0 0 61 32,-3.0 4,-1.2 1,-0.2 -1,-0.2 0.955 109.3 45.0 -59.9 -53.3 6.3 -1.9 3.4 33 179 A D H 4 S+ 0 0 78 31,-0.3 -1,-0.2 1,-0.2 -2,-0.2 0.706 115.6 50.6 -68.0 -19.8 9.1 0.6 4.1 34 180 A S H < S+ 0 0 23 -4,-1.6 3,-0.5 1,-0.1 4,-0.3 0.893 117.7 35.4 -80.7 -44.6 7.0 3.3 2.4 35 181 A L H X S+ 0 0 1 -4,-2.7 4,-2.9 1,-0.2 5,-0.3 0.432 85.8 103.9 -92.1 -0.0 3.8 2.7 4.3 36 182 A K H X S+ 0 0 116 -4,-1.2 4,-2.3 1,-0.2 -1,-0.2 0.842 83.9 48.9 -51.6 -36.9 5.6 1.8 7.6 37 183 A K H > S+ 0 0 169 -3,-0.5 4,-2.6 2,-0.2 -1,-0.2 0.928 111.2 48.5 -67.7 -46.1 4.6 5.3 8.9 38 184 A A H > S+ 0 0 4 -4,-0.3 4,-0.7 2,-0.2 -2,-0.2 0.902 114.6 45.9 -61.3 -43.2 1.0 5.0 7.9 39 185 A L H >X>S+ 0 0 4 -4,-2.9 5,-2.5 2,-0.2 4,-1.2 0.926 111.5 52.5 -64.8 -45.5 0.8 1.5 9.5 40 186 A M H ><5S+ 0 0 154 -4,-2.3 3,-0.8 -5,-0.3 -2,-0.2 0.932 107.9 49.6 -56.9 -49.6 2.5 2.8 12.7 41 187 A M H 3<5S+ 0 0 143 -4,-2.6 -1,-0.2 1,-0.3 -2,-0.2 0.677 115.5 45.5 -67.2 -17.2 0.1 5.7 13.2 42 188 A R H <<5S- 0 0 66 -4,-0.7 -1,-0.3 -3,-0.7 -2,-0.2 0.565 111.2-123.2 -95.9 -13.7 -2.8 3.2 12.7 43 189 A G T <<5 + 0 0 61 -4,-1.2 2,-0.4 -3,-0.8 -3,-0.2 0.765 65.1 137.6 76.2 27.6 -1.2 0.7 15.0 44 190 A L < - 0 0 43 -5,-2.5 -1,-0.2 -6,-0.1 -2,-0.2 -0.898 47.9-140.5-112.8 131.1 -1.3 -2.0 12.3 45 191 A I > - 0 0 110 -2,-0.4 3,-2.1 1,-0.1 4,-0.2 -0.677 22.4-123.6 -85.3 142.5 1.5 -4.5 11.6 46 192 A P G > S+ 0 0 30 0, 0.0 3,-0.8 0, 0.0 18,-0.1 0.743 110.4 61.2 -57.0 -24.3 2.2 -5.3 7.8 47 193 A E G 3 S+ 0 0 127 1,-0.2 -3,-0.0 3,-0.0 3,-0.0 0.640 104.1 47.9 -80.2 -14.6 1.7 -9.0 8.5 48 194 A C G < S+ 0 0 20 -3,-2.1 33,-2.8 33,-0.1 34,-0.6 0.239 105.2 74.7-105.5 11.4 -1.9 -8.4 9.7 49 195 A C E < -C 80 0A 4 -3,-0.8 2,-0.3 31,-0.2 31,-0.2 -0.984 63.3-157.7-129.9 133.2 -2.7 -6.3 6.6 50 196 A A E -C 79 0A 36 29,-2.5 29,-2.6 -2,-0.4 2,-0.4 -0.857 6.8-158.1-110.2 144.8 -3.3 -7.3 2.9 51 197 A V E +CD 78 62A 6 11,-0.6 11,-2.9 -2,-0.3 2,-0.3 -0.956 15.0 166.2-124.2 140.5 -2.9 -5.1 -0.2 52 198 A Y E -CD 77 61A 41 25,-1.1 25,-1.6 -2,-0.4 2,-0.3 -0.984 18.5-148.4-146.7 158.7 -4.3 -5.5 -3.7 53 199 A R E - D 0 60A 43 7,-2.4 7,-2.7 -2,-0.3 2,-0.6 -0.858 22.8-116.5-122.8 161.2 -4.8 -3.4 -6.9 54 200 A I E + D 0 59A 85 21,-0.4 2,-0.5 -2,-0.3 5,-0.2 -0.880 33.9 171.3-104.6 114.4 -7.5 -3.4 -9.6 55 201 A Q E > S- D 0 58A 94 3,-2.8 3,-2.0 -2,-0.6 -2,-0.0 -0.982 74.9 -15.2-124.1 119.6 -6.4 -4.4 -13.1 56 202 A D T 3 S- 0 0 146 -2,-0.5 -1,-0.1 1,-0.3 3,-0.1 0.815 129.9 -54.4 57.2 32.0 -9.1 -5.0 -15.9 57 203 A G T 3 S+ 0 0 67 1,-0.3 2,-0.4 0, 0.0 -1,-0.3 0.404 115.6 118.9 85.2 -2.9 -11.7 -5.1 -13.1 58 204 A E E < -D 55 0A 111 -3,-2.0 -3,-2.8 2,-0.0 2,-0.9 -0.794 63.7-131.6-101.8 139.2 -9.8 -7.8 -11.2 59 205 A K E -D 54 0A 142 -2,-0.4 -5,-0.2 -5,-0.2 -3,-0.0 -0.767 28.5-174.3 -89.1 103.4 -8.4 -7.5 -7.7 60 206 A K E -D 53 0A 95 -7,-2.7 -7,-2.4 -2,-0.9 -2,-0.0 -0.881 22.4-121.2-104.1 127.5 -4.8 -8.8 -7.7 61 207 A P E -D 52 0A 111 0, 0.0 2,-0.4 0, 0.0 -9,-0.3 -0.218 22.9-152.3 -65.8 152.3 -2.8 -9.1 -4.4 62 208 A I E -D 51 0A 26 -11,-2.9 -11,-0.6 4,-0.0 2,-0.4 -0.979 12.7-124.8-129.8 138.6 0.5 -7.3 -3.8 63 209 A G > - 0 0 38 -2,-0.4 3,-2.0 1,-0.1 -32,-0.3 -0.670 12.9-137.9 -84.0 134.4 3.5 -8.1 -1.6 64 210 A W T 3 S+ 0 0 18 -2,-0.4 -32,-3.0 1,-0.3 -33,-0.3 0.799 103.5 59.2 -57.3 -30.5 4.7 -5.5 0.9 65 211 A D T 3 S+ 0 0 101 -34,-0.2 2,-0.3 -35,-0.2 -1,-0.3 0.347 82.2 108.9 -87.2 7.8 8.3 -6.2 0.1 66 212 A T S < S- 0 0 53 -3,-2.0 -35,-2.5 1,-0.1 -34,-0.2 -0.647 84.4 -96.8 -82.6 140.6 7.8 -5.3 -3.6 67 213 A D B > -E 30 0B 51 -2,-0.3 3,-2.1 -37,-0.3 -37,-0.3 -0.367 23.9-137.9 -59.1 126.9 9.3 -2.0 -4.8 68 214 A I G > S+ 0 0 2 -39,-2.6 3,-1.8 -42,-0.3 -1,-0.2 0.734 98.9 75.5 -60.2 -21.5 6.8 0.9 -4.7 69 215 A S G > S+ 0 0 32 -43,-0.7 3,-1.2 -40,-0.5 -1,-0.3 0.789 86.0 62.5 -60.7 -27.5 8.2 2.0 -8.1 70 216 A W G < S+ 0 0 194 -3,-2.1 -1,-0.3 1,-0.2 -2,-0.2 0.666 104.4 48.5 -70.4 -16.3 6.3 -0.9 -9.6 71 217 A L G X S+ 0 0 11 -3,-1.8 3,-2.7 -4,-0.3 2,-0.4 0.068 75.1 154.7-112.8 22.5 3.0 0.7 -8.4 72 218 A T T < S+ 0 0 71 -3,-1.2 -61,-0.2 1,-0.3 -3,-0.1 -0.343 78.8 5.0 -56.7 108.4 3.7 4.3 -9.7 73 219 A G T 3 S+ 0 0 60 -63,-1.5 -1,-0.3 -2,-0.4 2,-0.2 0.579 101.1 132.3 91.5 11.1 0.2 5.8 -10.2 74 220 A E < - 0 0 53 -3,-2.7 -62,-2.0 -64,-0.1 2,-0.6 -0.651 53.2-134.7 -93.8 151.3 -1.7 2.8 -8.7 75 221 A E E -b 12 0A 88 -2,-0.2 -21,-0.4 -64,-0.2 2,-0.2 -0.927 25.9-161.7-105.5 114.3 -4.5 3.0 -6.1 76 222 A L E -b 13 0A 1 -64,-2.4 -62,-2.9 -2,-0.6 2,-0.4 -0.636 7.7-155.5 -97.5 150.6 -4.1 0.4 -3.3 77 223 A H E -bC 14 52A 58 -25,-1.6 -25,-1.1 -2,-0.2 2,-0.4 -0.992 11.4-145.1-127.6 127.6 -6.7 -0.9 -0.9 78 224 A V E - C 0 51A 11 -64,-2.2 2,-0.4 -2,-0.4 -27,-0.2 -0.731 9.2-161.7 -96.7 137.5 -5.7 -2.4 2.5 79 225 A E E - C 0 50A 91 -29,-2.6 -29,-2.5 -2,-0.4 2,-0.6 -0.912 18.0-128.9-113.8 144.2 -7.6 -5.3 4.3 80 226 A V E - C 0 49A 38 -2,-0.4 3,-0.2 -31,-0.2 -31,-0.2 -0.827 15.7-170.0 -94.4 116.4 -7.4 -6.3 8.0 81 227 A L S S+ 0 0 104 -33,-2.8 2,-0.4 -2,-0.6 -1,-0.2 0.928 83.8 19.8 -70.4 -47.9 -6.6 -10.0 8.5 82 228 A E - 0 0 152 -34,-0.6 -1,-0.3 1,-0.1 -34,-0.0 -0.954 66.7-170.6-125.7 114.2 -7.2 -9.9 12.3 83 229 A N + 0 0 133 -2,-0.4 -1,-0.1 -3,-0.2 -2,-0.1 0.832 67.0 81.5 -74.3 -34.9 -9.4 -7.0 13.5 84 230 A V S S- 0 0 111 1,-0.1 2,-0.7 2,-0.0 -1,-0.0 -0.639 78.2-139.5 -77.6 115.4 -8.9 -7.6 17.3 85 231 A P 0 0 119 0, 0.0 -2,-0.1 0, 0.0 -1,-0.1 -0.656 360.0 360.0 -81.8 111.6 -5.5 -6.1 18.4 86 232 A L 0 0 225 -2,-0.7 -2,-0.0 0, 0.0 0, 0.0 0.898 360.0 360.0 -92.9 360.0 -3.6 -8.4 20.8