==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-AUG-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PLANT PROTEIN 30-JUN-10 2L07 . COMPND 2 MOLECULE: DEFENSIN-LIKE PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: PENTADIPLANDRA BRAZZEANA; . AUTHOR S.M.DITTLI,F.M.ASSADI-PORTER,H.RAO,M.TONELLI . 18 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2393.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 5 27.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 3 16.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A D 0 0 207 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 61.6 5.5 1.1 11.6 2 2 A a - 0 0 83 14,-0.1 2,-0.4 16,-0.0 14,-0.1 -0.873 360.0-154.0-129.2 162.1 3.6 0.8 8.3 3 3 A K - 0 0 169 -2,-0.3 12,-0.1 12,-0.1 2,-0.0 -0.970 24.6-117.7-142.2 123.5 4.5 0.5 4.6 4 4 A R - 0 0 177 -2,-0.4 2,-0.5 1,-0.1 10,-0.1 -0.323 31.2-127.8 -59.2 133.2 2.5 1.5 1.5 5 5 A K E -A 13 0A 116 8,-0.8 8,-2.5 10,-0.2 2,-0.4 -0.735 17.1-143.8 -88.7 127.2 1.5 -1.4 -0.7 6 6 A V E -A 12 0A 116 -2,-0.5 6,-0.2 6,-0.2 -1,-0.0 -0.772 13.2-152.0 -93.7 130.9 2.4 -1.1 -4.3 7 7 A Y > - 0 0 143 4,-2.7 3,-1.2 -2,-0.4 -1,-0.0 -0.606 24.2-119.9 -99.3 160.5 0.0 -2.6 -6.9 8 8 A P T 3 S+ 0 0 132 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.696 107.9 72.6 -69.8 -19.5 0.8 -3.9 -10.4 9 9 A N T 3 S- 0 0 149 2,-0.1 3,-0.1 1,-0.1 -3,-0.0 0.707 119.1-105.9 -68.6 -19.7 -1.6 -1.3 -11.9 10 10 A G S < S+ 0 0 72 -3,-1.2 2,-0.2 1,-0.4 -1,-0.1 0.482 86.7 103.4 106.2 6.0 1.0 1.3 -11.1 11 11 A S - 0 0 71 -6,-0.0 -4,-2.7 0, 0.0 -1,-0.4 -0.701 63.4-123.7-116.1 169.0 -0.7 2.8 -8.1 12 12 A I E -A 6 0A 109 -2,-0.2 2,-0.4 -6,-0.2 -6,-0.2 -0.870 16.8-129.7-115.5 148.3 -0.3 2.6 -4.3 13 13 A S E -A 5 0A 21 -8,-2.5 2,-0.8 -2,-0.3 -8,-0.8 -0.810 4.9-150.7 -99.1 133.9 -2.9 1.6 -1.7 14 14 A D + 0 0 139 -2,-0.4 2,-0.3 -10,-0.1 -10,-0.1 -0.474 62.9 102.4 -99.2 61.1 -3.4 3.8 1.4 15 15 A Y - 0 0 194 -2,-0.8 2,-0.4 -12,-0.1 -10,-0.2 -0.916 45.2-174.1-148.1 116.9 -4.4 1.0 3.8 16 16 A a - 0 0 62 -2,-0.3 2,-0.4 -12,-0.1 -12,-0.1 -0.874 24.5-122.5-113.1 144.6 -2.3 -0.5 6.5 17 17 A E 0 0 165 -2,-0.4 -2,-0.0 1,-0.0 0, 0.0 -0.688 360.0 360.0 -87.2 133.7 -3.1 -3.5 8.7 18 18 A Y 0 0 268 -2,-0.4 -16,-0.0 -16,-0.0 -1,-0.0 -0.836 360.0 360.0-112.0 360.0 -3.0 -3.0 12.5