==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-JAN-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIGASE 30-JUN-10 2L0B . COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE PRAJA-1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR G.LIU,S.TONG,K.HAMILTON,C.CICCOSANTI,R.SHASTRY,T.B.ACTON,R.X . 91 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6571.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 51 56.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 15.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 14 15.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 8.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 13 14.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 233 0, 0.0 2,-0.5 0, 0.0 3,-0.2 0.000 360.0 360.0 360.0 108.6 -23.5 17.0 3.4 2 2 A G + 0 0 52 1,-0.2 3,-0.1 3,-0.1 0, 0.0 -0.585 360.0 135.4-110.8 68.7 -20.4 18.6 5.0 3 3 A H S S+ 0 0 184 -2,-0.5 2,-0.5 1,-0.2 -1,-0.2 0.869 71.1 40.9 -84.4 -40.3 -22.0 21.3 7.1 4 4 A H S S- 0 0 158 -3,-0.2 2,-1.0 2,-0.0 -1,-0.2 -0.951 79.5-150.1-111.5 120.8 -20.0 20.7 10.2 5 5 A H + 0 0 161 -2,-0.5 2,-1.3 -3,-0.1 3,-0.2 -0.751 19.7 175.3 -98.3 93.9 -16.3 20.0 9.5 6 6 A H + 0 0 140 -2,-1.0 -2,-0.0 1,-0.2 -1,-0.0 -0.734 13.6 168.4 -90.4 82.8 -14.8 17.8 12.2 7 7 A H + 0 0 187 -2,-1.3 2,-1.0 1,-0.2 -1,-0.2 0.847 58.4 63.9 -70.6 -36.8 -11.5 17.6 10.3 8 8 A H S S- 0 0 137 -3,-0.2 -1,-0.2 3,-0.0 2,-0.1 -0.782 73.9-170.6 -96.0 100.5 -9.4 16.1 13.1 9 9 A S + 0 0 80 -2,-1.0 -2,-0.0 2,-0.0 0, 0.0 -0.424 45.0 36.4 -86.3 164.2 -10.9 12.6 13.8 10 10 A H - 0 0 97 -2,-0.1 3,-0.1 1,-0.1 4,-0.0 0.462 65.9-126.3 72.3 143.7 -10.0 10.3 16.7 11 11 A M S S+ 0 0 206 1,-0.2 2,-0.4 2,-0.0 -1,-0.1 0.742 103.0 41.8 -87.5 -30.0 -9.2 11.4 20.3 12 12 A V S S- 0 0 109 0, 0.0 -1,-0.2 0, 0.0 2,-0.1 -0.967 91.4-124.9-119.1 134.3 -5.9 9.5 20.1 13 13 A A - 0 0 78 -2,-0.4 -3,-0.1 -3,-0.1 -2,-0.0 -0.424 21.5-115.6 -80.3 151.5 -3.8 9.6 17.0 14 14 A N - 0 0 46 63,-0.2 -1,-0.1 -2,-0.1 65,-0.1 -0.718 29.0-126.8 -87.9 131.7 -2.6 6.5 15.1 15 15 A P - 0 0 77 0, 0.0 72,-0.3 0, 0.0 61,-0.1 -0.492 25.4-108.8 -77.8 145.6 1.1 5.8 15.0 16 16 A P - 0 0 76 0, 0.0 59,-0.3 0, 0.0 58,-0.1 -0.357 34.1-114.3 -70.6 153.4 3.0 5.2 11.7 17 17 A A - 0 0 7 57,-2.7 2,-0.3 70,-0.1 61,-0.1 -0.320 26.7-106.8 -83.9 167.7 4.3 1.8 10.8 18 18 A S >> - 0 0 67 1,-0.1 4,-1.2 -2,-0.1 3,-0.6 -0.702 22.1-121.9 -94.8 151.3 7.9 0.7 10.4 19 19 A K H 3> S+ 0 0 96 -2,-0.3 4,-3.2 1,-0.2 3,-0.4 0.864 110.9 61.5 -59.0 -37.6 9.5 0.0 7.0 20 20 A E H 3> S+ 0 0 122 1,-0.3 4,-1.0 2,-0.2 -1,-0.2 0.883 104.1 47.7 -56.9 -41.9 10.3 -3.5 8.1 21 21 A S H <4 S+ 0 0 53 -3,-0.6 -1,-0.3 1,-0.2 -2,-0.2 0.780 115.2 46.1 -72.3 -27.0 6.7 -4.3 8.6 22 22 A I H >< S+ 0 0 0 -4,-1.2 3,-1.6 -3,-0.4 -2,-0.2 0.860 109.0 52.9 -82.9 -38.8 5.8 -2.8 5.2 23 23 A D H 3< S+ 0 0 89 -4,-3.2 -2,-0.2 1,-0.3 -1,-0.2 0.743 101.6 63.1 -68.7 -20.7 8.6 -4.5 3.3 24 24 A A T 3< S+ 0 0 83 -4,-1.0 -1,-0.3 -5,-0.3 -2,-0.2 0.483 83.5 105.5 -81.9 -3.8 7.4 -7.8 4.7 25 25 A L S < S- 0 0 19 -3,-1.6 2,-0.2 1,-0.1 34,-0.1 -0.444 89.6 -84.9 -75.4 152.3 4.1 -7.2 2.8 26 26 A P - 0 0 68 0, 0.0 32,-0.7 0, 0.0 2,-0.6 -0.386 41.1-137.4 -61.9 122.9 3.4 -9.3 -0.3 27 27 A E E -A 57 0A 131 -2,-0.2 2,-0.7 30,-0.2 30,-0.2 -0.750 17.8-165.6 -86.9 118.3 5.0 -7.7 -3.4 28 28 A I E -A 56 0A 50 28,-3.5 28,-3.4 -2,-0.6 2,-0.6 -0.892 11.3-147.2-110.2 103.6 2.7 -7.9 -6.3 29 29 A L E -A 55 0A 115 -2,-0.7 2,-0.6 26,-0.2 26,-0.2 -0.600 23.2-128.0 -68.2 114.6 4.3 -7.1 -9.7 30 30 A V - 0 0 0 24,-2.4 23,-1.8 -2,-0.6 24,-0.3 -0.557 29.1-160.4 -70.1 111.1 1.7 -5.4 -11.7 31 31 A T > - 0 0 47 -2,-0.6 3,-1.7 21,-0.2 23,-0.1 -0.426 31.3-105.2 -88.2 169.7 1.4 -7.2 -15.0 32 32 A E T 3 S+ 0 0 143 1,-0.3 -1,-0.1 -2,-0.1 -2,-0.1 0.580 120.0 60.4 -76.4 -8.3 -0.0 -5.9 -18.2 33 33 A D T 3 S+ 0 0 123 1,-0.1 2,-0.8 18,-0.1 -1,-0.3 0.453 91.7 80.2 -91.5 -2.4 -3.1 -8.1 -17.7 34 34 A H < + 0 0 76 -3,-1.7 -1,-0.1 1,-0.2 3,-0.1 -0.808 41.1 153.5-109.2 90.7 -3.8 -6.2 -14.5 35 35 A G S S+ 0 0 44 -2,-0.8 15,-0.9 1,-0.3 2,-0.3 0.746 79.8 25.0 -81.9 -26.8 -5.4 -2.9 -15.1 36 36 A A S S- 0 0 43 -3,-0.2 2,-0.6 13,-0.1 -1,-0.3 -0.997 70.1-152.4-137.2 140.5 -7.0 -3.0 -11.7 37 37 A V S S- 0 0 10 3,-0.7 27,-0.3 -2,-0.3 3,-0.1 -0.824 75.6 -45.9-118.9 90.8 -5.8 -4.9 -8.6 38 38 A G S S+ 0 0 70 -2,-0.6 2,-0.2 1,-0.2 26,-0.1 0.628 132.6 36.3 65.9 13.9 -8.6 -5.8 -6.3 39 39 A Q S S- 0 0 51 1,-0.3 -1,-0.2 24,-0.1 4,-0.1 -0.734 108.4 -33.6-161.0-155.9 -9.9 -2.3 -6.7 40 40 A E - 0 0 144 2,-0.2 -3,-0.7 -2,-0.2 -1,-0.3 -0.135 62.3-104.3 -68.9 177.6 -10.3 0.5 -9.2 41 41 A M S S+ 0 0 103 -5,-0.2 9,-1.3 8,-0.1 2,-0.4 0.470 98.3 82.2 -84.3 0.0 -7.7 1.0 -11.9 42 42 A C E S-C 49 0B 47 7,-0.2 7,-0.3 5,-0.0 -2,-0.2 -0.898 72.0-140.7-116.4 131.8 -6.4 4.1 -10.0 43 43 A C E >>> -C 48 0B 0 5,-3.5 3,-1.8 -2,-0.4 4,-1.6 -0.808 18.5-150.4 -83.5 107.9 -4.0 4.3 -7.1 44 44 A P T 345S+ 0 0 76 0, 0.0 -1,-0.2 0, 0.0 3,-0.1 0.833 93.8 57.8 -51.2 -38.9 -5.6 7.1 -5.0 45 45 A I T 345S+ 0 0 58 1,-0.2 20,-0.0 -3,-0.1 -2,-0.0 0.806 121.3 27.1 -62.3 -29.5 -2.2 8.1 -3.6 46 46 A C T <45S- 0 0 53 -3,-1.8 -1,-0.2 2,-0.2 3,-0.1 0.483 93.0-137.4-110.1 -8.6 -0.9 8.7 -7.1 47 47 A C T <5S+ 0 0 118 -4,-1.6 2,-0.3 1,-0.2 -2,-0.1 0.799 71.6 114.3 45.2 35.0 -4.2 9.5 -8.9 48 48 A S E < -C 43 0B 62 -5,-1.1 -5,-3.5 1,-0.1 -2,-0.2 -0.893 67.2-105.5-133.8 159.8 -2.7 7.3 -11.6 49 49 A E E -C 42 0B 119 -2,-0.3 2,-0.5 -7,-0.3 -7,-0.2 -0.132 31.5-101.9 -84.0 172.6 -3.6 3.9 -13.0 50 50 A Y + 0 0 4 -9,-1.3 2,-0.3 -15,-0.9 -1,-0.1 -0.867 48.0 161.1 -98.1 123.9 -2.0 0.4 -12.7 51 51 A V > - 0 0 78 -2,-0.5 3,-1.6 -21,-0.1 -21,-0.2 -0.916 47.8 -71.6-137.3 164.8 0.2 -0.7 -15.5 52 52 A K T 3 S+ 0 0 124 -2,-0.3 -21,-0.2 1,-0.2 3,-0.1 -0.341 113.7 38.3 -58.8 125.6 2.9 -3.3 -16.1 53 53 A G T 3 S+ 0 0 59 -23,-1.8 -1,-0.2 1,-0.5 2,-0.1 0.070 87.6 105.6 123.8 -24.0 6.1 -2.4 -14.4 54 54 A D < - 0 0 55 -3,-1.6 -24,-2.4 -24,-0.3 2,-0.6 -0.472 67.6-122.0 -86.6 161.5 4.8 -0.9 -11.1 55 55 A V E -A 29 0A 51 -26,-0.2 12,-2.0 -2,-0.1 -26,-0.2 -0.911 30.0-175.8-110.9 115.2 5.0 -2.7 -7.8 56 56 A A E -AB 28 66A 0 -28,-3.4 -28,-3.5 -2,-0.6 2,-0.3 -0.552 1.5-172.1-101.0 168.3 1.8 -3.3 -5.9 57 57 A T E -AB 27 65A 0 8,-2.8 8,-2.0 -30,-0.2 2,-0.5 -0.965 19.9-122.2-152.8 166.2 1.2 -4.8 -2.4 58 58 A E E - B 0 64A 42 -32,-0.7 6,-0.2 -2,-0.3 4,-0.1 -0.962 15.4-141.7-120.4 119.7 -1.7 -5.9 -0.3 59 59 A L E >> - B 0 63A 1 4,-2.8 3,-1.8 -2,-0.5 4,-1.1 -0.561 32.8-112.2 -70.4 142.4 -2.4 -4.5 3.2 60 60 A P T 34 S+ 0 0 60 0, 0.0 -1,-0.1 0, 0.0 27,-0.0 0.682 117.1 67.1 -52.8 -20.8 -3.6 -7.3 5.6 61 61 A C T 34 S- 0 0 51 2,-0.1 -2,-0.1 24,-0.1 24,-0.0 0.151 125.3-101.8 -85.9 19.3 -7.1 -5.7 5.6 62 62 A H T <4 S+ 0 0 132 -3,-1.8 2,-0.3 1,-0.2 -4,-0.1 0.981 78.4 133.3 58.0 65.4 -7.3 -6.6 1.9 63 63 A H E < -B 59 0A 47 -4,-1.1 -4,-2.8 2,-0.0 2,-0.3 -0.940 43.3-144.1-145.1 123.1 -6.5 -3.3 0.3 64 64 A Y E +B 58 0A 52 -2,-0.3 2,-0.3 -27,-0.3 -6,-0.2 -0.645 29.1 148.7 -94.8 141.3 -4.1 -3.0 -2.6 65 65 A F E -B 57 0A 0 -8,-2.0 -8,-2.8 -2,-0.3 2,-0.4 -0.906 54.7 -76.8-149.1 175.2 -1.7 -0.1 -3.3 66 66 A H E > -B 56 0A 4 -10,-0.3 4,-2.7 -2,-0.3 -10,-0.3 -0.705 37.5-137.4 -77.3 133.7 1.7 0.5 -4.8 67 67 A K H > S+ 0 0 14 -12,-2.0 4,-2.7 -2,-0.4 5,-0.2 0.941 100.5 54.3 -57.7 -50.7 4.4 -0.7 -2.4 68 68 A P H > S+ 0 0 71 0, 0.0 4,-0.7 0, 0.0 -1,-0.2 0.897 117.0 36.4 -49.3 -46.9 6.6 2.4 -3.1 69 69 A C H > S+ 0 0 19 1,-0.2 4,-2.1 2,-0.2 3,-0.2 0.860 117.1 50.5 -80.6 -34.1 3.8 4.9 -2.3 70 70 A V H X S+ 0 0 0 -4,-2.7 4,-3.2 1,-0.2 5,-0.2 0.841 102.9 61.3 -73.8 -30.2 2.2 3.0 0.5 71 71 A S H X S+ 0 0 19 -4,-2.7 4,-0.5 -5,-0.3 -1,-0.2 0.837 110.5 41.1 -63.4 -33.0 5.5 2.5 2.3 72 72 A I H < S+ 0 0 106 -4,-0.7 3,-0.3 -5,-0.2 4,-0.2 0.894 115.6 49.8 -79.4 -42.4 5.8 6.3 2.6 73 73 A W H >X>S+ 0 0 73 -4,-2.1 4,-3.6 1,-0.2 3,-1.5 0.909 107.8 52.9 -63.4 -43.8 2.1 6.8 3.5 74 74 A L H 3<5S+ 0 0 0 -4,-3.2 -57,-2.7 1,-0.3 -1,-0.2 0.765 110.5 48.3 -66.7 -24.3 2.2 4.1 6.2 75 75 A Q T 3<5S+ 0 0 92 -4,-0.5 -1,-0.3 -3,-0.3 -2,-0.2 0.416 119.7 40.1 -92.5 0.5 5.2 5.8 7.8 76 76 A K T <45S+ 0 0 144 -3,-1.5 -2,-0.2 -4,-0.2 -3,-0.2 0.724 138.7 4.7-115.0 -41.7 3.4 9.2 7.6 77 77 A S T <5S- 0 0 41 -4,-3.6 -3,-0.2 -5,-0.1 -63,-0.2 0.563 77.8-147.6-120.9 -20.4 -0.3 8.5 8.5 78 78 A G < + 0 0 0 -5,-1.2 9,-2.1 1,-0.2 2,-0.3 0.746 61.5 108.5 58.6 26.6 -0.1 4.8 9.4 79 79 A T B S-D 86 0C 31 -6,-0.3 7,-0.2 7,-0.2 -1,-0.2 -0.986 77.8-112.8-138.3 145.1 -3.6 4.3 8.1 80 80 A C >> - 0 0 2 5,-3.0 4,-3.9 -2,-0.3 3,-1.3 -0.673 29.9-144.1 -75.0 110.7 -5.3 2.5 5.2 81 81 A P T 34 S+ 0 0 46 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 0.759 94.5 49.3 -50.2 -33.0 -6.7 5.5 3.1 82 82 A V T 34 S+ 0 0 75 1,-0.1 -2,-0.0 3,-0.1 -19,-0.0 0.789 130.1 15.2 -81.9 -28.6 -9.8 3.6 2.1 83 83 A C T <4 S- 0 0 49 -3,-1.3 -1,-0.1 2,-0.2 3,-0.1 0.521 90.0-130.0-125.1 -13.1 -10.9 2.2 5.5 84 84 A R < + 0 0 185 -4,-3.9 2,-0.3 1,-0.3 -2,-0.0 0.721 55.6 148.9 66.4 23.1 -8.9 4.3 7.9 85 85 A C - 0 0 48 -5,-0.5 -5,-3.0 1,-0.1 -1,-0.3 -0.658 49.6-107.7 -85.0 145.3 -7.8 1.2 9.7 86 86 A M B -D 79 0C 42 -2,-0.3 -7,-0.2 -7,-0.2 -8,-0.1 -0.352 30.6-114.4 -75.5 150.5 -4.3 1.4 11.3 87 87 A F S S+ 0 0 11 -9,-2.1 -70,-0.1 -72,-0.3 -65,-0.1 -0.990 107.3 45.7-129.5 126.0 -1.2 -0.4 10.1 88 88 A P S S- 0 0 64 0, 0.0 -2,-0.1 0, 0.0 -66,-0.0 0.467 121.3-102.2 -61.9 153.4 0.0 -2.5 11.6 89 89 A P - 0 0 65 0, 0.0 -2,-0.2 0, 0.0 -10,-0.0 -0.169 36.8-120.9 -55.3 138.3 -3.6 -3.8 12.0 90 90 A P 0 0 64 0, 0.0 -5,-0.0 0, 0.0 0, 0.0 -0.083 360.0 360.0 -72.2 177.5 -5.2 -3.1 15.4 91 91 A L 0 0 242 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.854 360.0 360.0-120.3 360.0 -6.6 -5.6 17.8