==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-JAN-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 01-JUL-10 2L0G . COMPND 2 MOLECULE: DNA POLYMERASE IOTA; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR G.CUI,R.BENIRSCHKE,G.MER . 32 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2634.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 21 65.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 12.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 16 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -3 A G 0 0 31 0, 0.0 8,-0.4 0, 0.0 2,-0.3 0.000 360.0 360.0 360.0 144.0 1.2 2.6 4.6 2 -2 A H + 0 0 128 6,-0.7 4,-0.1 1,-0.0 5,-0.0 -0.982 360.0 2.8-147.5 146.4 -1.5 0.3 3.0 3 -1 A M S S+ 0 0 146 -2,-0.3 6,-0.1 2,-0.1 3,-0.0 0.564 125.4 72.9 46.1 17.9 -3.9 1.0 0.2 4 679 A F S S- 0 0 30 4,-0.2 -1,-0.1 1,-0.0 9,-0.0 -0.941 108.6 -67.4-152.4 152.6 -2.1 4.4 0.1 5 680 A P S S- 0 0 74 0, 0.0 -2,-0.1 0, 0.0 -1,-0.0 0.567 78.4 -80.4 -11.5 -88.1 1.4 5.5 -1.1 6 681 A S S S+ 0 0 101 -4,-0.1 -2,-0.0 -3,-0.0 -3,-0.0 0.258 120.1 41.9-160.2 -40.3 3.9 3.8 1.3 7 682 A D S S+ 0 0 122 2,-0.0 2,-0.1 -6,-0.0 -3,-0.0 0.973 96.5 78.7 -77.5 -63.1 4.1 5.9 4.5 8 683 A I - 0 0 21 -7,-0.2 -6,-0.7 4,-0.1 -4,-0.2 -0.232 65.0-157.6 -61.7 116.9 0.4 6.8 5.0 9 684 A D > - 0 0 58 -8,-0.4 4,-2.3 -2,-0.1 5,-0.2 -0.607 36.0-102.8 -83.5 157.8 -1.6 3.9 6.6 10 685 A P H > S+ 0 0 37 0, 0.0 4,-1.9 0, 0.0 5,-0.1 0.878 121.4 49.2 -56.7 -42.6 -5.4 4.2 5.8 11 686 A Q H > S+ 0 0 140 1,-0.2 4,-1.4 2,-0.2 5,-0.2 0.931 110.4 50.2 -63.9 -43.5 -6.3 5.5 9.3 12 687 A V H > S+ 0 0 70 1,-0.3 4,-0.5 2,-0.2 -1,-0.2 0.855 109.1 52.2 -65.9 -36.9 -3.5 8.2 9.2 13 688 A F H >< S+ 0 0 3 -4,-2.3 3,-0.8 1,-0.2 -1,-0.3 0.896 111.2 46.8 -64.4 -37.9 -4.7 9.4 5.8 14 689 A Y H 3< S+ 0 0 136 -4,-1.9 -2,-0.2 1,-0.2 -1,-0.2 0.666 100.5 66.3 -81.5 -14.4 -8.3 9.7 7.2 15 690 A E H 3< S+ 0 0 124 -4,-1.4 -1,-0.2 -5,-0.1 -2,-0.2 0.625 85.9 94.4 -73.6 -16.2 -6.9 11.6 10.3 16 691 A L S << S- 0 0 58 -3,-0.8 5,-0.1 -4,-0.5 -3,-0.0 -0.465 99.7 -85.1 -67.0 150.8 -6.0 14.3 7.8 17 692 A P >> - 0 0 85 0, 0.0 4,-2.0 0, 0.0 3,-1.2 -0.286 39.0-116.5 -55.0 142.5 -8.6 17.1 7.4 18 693 A E H 3> S+ 0 0 111 1,-0.3 4,-2.3 2,-0.2 5,-0.1 0.855 116.7 53.6 -53.9 -35.7 -11.3 16.1 4.8 19 694 A A H 3> S+ 0 0 69 1,-0.2 4,-1.6 2,-0.2 -1,-0.3 0.811 107.2 50.3 -72.5 -28.7 -10.2 19.0 2.6 20 695 A V H <> S+ 0 0 59 -3,-1.2 4,-2.6 2,-0.2 -1,-0.2 0.883 108.4 53.3 -70.7 -37.5 -6.6 17.8 2.6 21 696 A Q H X S+ 0 0 33 -4,-2.0 4,-2.1 1,-0.2 -2,-0.2 0.966 109.1 49.4 -62.3 -50.4 -7.8 14.3 1.7 22 697 A K H X S+ 0 0 115 -4,-2.3 4,-1.7 2,-0.2 -1,-0.2 0.862 109.7 50.5 -49.2 -48.2 -9.6 15.8 -1.3 23 698 A E H X S+ 0 0 89 -4,-1.6 4,-2.4 1,-0.2 -1,-0.2 0.935 109.0 51.6 -64.5 -41.7 -6.5 17.7 -2.4 24 699 A L H X S+ 0 0 53 -4,-2.6 4,-3.0 2,-0.2 -2,-0.2 0.846 105.8 55.5 -63.0 -32.5 -4.4 14.5 -2.2 25 700 A L H X S+ 0 0 103 -4,-2.1 4,-2.6 2,-0.2 -1,-0.2 0.899 111.4 44.2 -63.3 -40.3 -7.1 12.8 -4.4 26 701 A A H X S+ 0 0 40 -4,-1.7 4,-0.9 2,-0.2 -2,-0.2 0.841 112.5 52.6 -71.1 -34.3 -6.5 15.6 -6.9 27 702 A E H >X S+ 0 0 71 -4,-2.4 3,-0.9 2,-0.2 4,-0.5 0.960 113.0 43.1 -64.4 -51.7 -2.7 15.3 -6.4 28 703 A W H >X S+ 0 0 65 -4,-3.0 4,-2.5 1,-0.3 3,-1.9 0.970 114.1 51.4 -59.9 -46.3 -2.8 11.5 -7.1 29 704 A K H 3< S+ 0 0 138 -4,-2.6 -1,-0.3 1,-0.3 -2,-0.2 0.649 111.4 48.2 -69.2 -11.3 -5.2 12.2 -10.0 30 705 A R H << S+ 0 0 130 -4,-0.9 -1,-0.3 -3,-0.9 -2,-0.2 0.373 118.8 39.1-104.1 5.0 -2.7 14.8 -11.5 31 706 A T H << 0 0 105 -3,-1.9 -2,-0.2 -4,-0.5 -3,-0.2 0.516 360.0 360.0-124.4 -15.0 0.3 12.4 -11.1 32 707 A G < 0 0 89 -4,-2.5 -3,-0.2 -5,-0.2 -4,-0.1 0.106 360.0 360.0-152.9 360.0 -1.4 9.2 -12.2