==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=8-APR-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION REGULATOR 22-JUL-10 2L11 . COMPND 2 MOLECULE: CHROMOBOX PROTEIN HOMOLOG 3; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR L.KAUSTOV,A.LEMAK,C.FARES,A.GUTMANAS,H.QUANG,P.LOPPNAU,J.MIN . 69 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5184.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 44 63.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 22 31.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 13.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 10 14.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 89 0, 0.0 63,-1.1 0, 0.0 2,-0.7 0.000 360.0 360.0 360.0 134.4 2.4 2.5 1.5 2 2 A E E -A 63 0A 119 61,-0.2 2,-0.3 59,-0.0 61,-0.2 -0.911 360.0-169.6-100.7 108.7 5.5 1.6 -0.7 3 3 A F E -A 62 0A 64 59,-1.8 59,-1.9 -2,-0.7 2,-0.5 -0.734 24.9-109.2-106.6 147.7 6.5 4.8 -2.4 4 4 A V E -A 61 0A 35 -2,-0.3 21,-2.1 57,-0.2 22,-1.9 -0.646 29.7-156.5 -78.5 119.7 9.0 5.4 -5.3 5 5 A V E -AB 60 24A 1 55,-2.4 55,-1.1 -2,-0.5 19,-0.3 -0.824 8.0-162.1 -93.2 137.6 12.2 7.2 -4.2 6 6 A E E - 0 0 60 17,-2.1 2,-0.3 -2,-0.4 18,-0.2 0.908 63.9 -31.2 -80.2 -51.5 14.2 9.1 -6.8 7 7 A K E - B 0 23A 105 16,-1.9 16,-1.2 53,-0.0 2,-0.3 -0.944 59.0 -96.5-161.2 169.4 17.6 9.4 -5.0 8 8 A V E + B 0 22A 12 37,-0.3 14,-0.2 -2,-0.3 3,-0.1 -0.834 24.9 178.3-100.2 143.1 19.4 9.8 -1.6 9 9 A L E - 0 0 80 12,-3.0 2,-0.3 1,-0.3 13,-0.2 0.712 65.3 -3.1-108.5 -39.2 20.5 13.2 -0.3 10 10 A D E - B 0 21A 78 11,-1.6 11,-1.7 2,-0.0 -1,-0.3 -0.926 55.8-147.1-154.0 166.4 22.1 12.4 3.2 11 11 A R E + B 0 20A 94 9,-0.3 2,-0.3 -2,-0.3 9,-0.2 -0.987 18.2 160.8-142.2 148.7 22.8 9.5 5.7 12 12 A R E - B 0 19A 140 7,-2.2 7,-1.6 -2,-0.3 2,-0.5 -0.918 34.7-115.0-152.4 174.6 23.1 9.1 9.6 13 13 A V E + B 0 18A 93 -2,-0.3 2,-0.5 5,-0.2 5,-0.2 -0.977 28.5 179.4-123.1 116.0 23.0 6.3 12.3 14 14 A V E > S- B 0 17A 40 3,-2.0 3,-1.5 -2,-0.5 -2,-0.0 -0.983 73.7 -14.4-118.6 121.2 20.1 6.3 14.8 15 15 A N T 3 S- 0 0 155 -2,-0.5 -1,-0.1 1,-0.3 3,-0.1 0.672 127.0 -57.3 64.1 23.6 19.9 3.6 17.6 16 16 A G T 3 S+ 0 0 65 1,-0.4 -1,-0.3 0, 0.0 2,-0.2 0.051 118.8 108.8 94.5 -23.3 22.5 1.5 15.6 17 17 A K E < S-B 14 0A 52 -3,-1.5 -3,-2.0 1,-0.0 2,-0.6 -0.498 70.3-123.6 -81.9 157.3 20.3 1.5 12.5 18 18 A V E -B 13 0A 24 -5,-0.2 19,-2.3 -2,-0.2 2,-0.4 -0.910 25.7-169.1-113.1 114.3 21.3 3.5 9.4 19 19 A E E -BC 12 36A 35 -7,-1.6 -7,-2.2 -2,-0.6 2,-0.5 -0.871 6.8-153.8-109.4 134.4 18.7 6.1 8.0 20 20 A Y E -BC 11 35A 7 15,-2.4 15,-2.5 -2,-0.4 2,-0.8 -0.922 17.3-131.2-108.8 128.5 19.0 7.9 4.7 21 21 A F E -BC 10 34A 60 -11,-1.7 -12,-3.0 -2,-0.5 -11,-1.6 -0.719 42.0-162.0 -76.9 108.4 17.5 11.3 4.0 22 22 A L E -B 8 0A 0 11,-2.2 2,-0.2 -2,-0.8 -14,-0.2 0.067 25.2-139.3 -82.8-174.7 15.8 10.5 0.7 23 23 A K E -B 7 0A 39 -16,-1.2 -17,-2.1 9,-0.1 -16,-1.9 -0.804 30.7-138.6-144.7 112.9 14.3 12.5 -2.2 24 24 A W E -B 5 0A 0 4,-0.5 -19,-0.3 -19,-0.3 7,-0.1 -0.414 16.2-158.5 -79.0 147.8 11.0 10.9 -3.5 25 25 A K S S+ 0 0 104 -21,-2.1 -20,-0.2 35,-0.2 -1,-0.1 0.772 99.7 48.1 -85.1 -36.2 10.0 10.5 -7.1 26 26 A G S S+ 0 0 53 -22,-1.9 2,-0.2 2,-0.1 -21,-0.1 0.776 119.0 39.2 -73.2 -29.0 6.3 10.2 -6.1 27 27 A F S S- 0 0 72 -23,-0.4 5,-0.1 1,-0.1 -4,-0.0 -0.649 97.3 -77.8-120.4 171.9 6.4 13.3 -3.8 28 28 A T > - 0 0 97 -2,-0.2 3,-0.6 1,-0.1 -4,-0.5 -0.214 41.4-111.2 -70.7 161.8 8.1 16.8 -3.8 29 29 A D T 3 S+ 0 0 110 1,-0.3 3,-0.4 2,-0.2 -1,-0.1 0.736 119.9 48.0 -68.7 -27.1 11.8 17.4 -3.0 30 30 A A T 3 S+ 0 0 81 1,-0.2 -1,-0.3 -7,-0.1 -2,-0.0 0.641 100.6 66.1 -84.5 -19.0 10.9 19.2 0.3 31 31 A D S < S+ 0 0 68 -3,-0.6 -1,-0.2 -7,-0.1 -2,-0.2 0.396 77.8 129.3 -83.5 1.6 8.5 16.3 1.3 32 32 A N - 0 0 21 -3,-0.4 2,-0.3 -4,-0.1 -9,-0.1 -0.218 39.5-167.4 -57.0 147.0 11.6 14.0 1.5 33 33 A T - 0 0 40 -13,-0.1 -11,-2.2 2,-0.0 2,-0.6 -0.909 28.1 -94.7-140.9 158.7 12.0 11.9 4.7 34 34 A W E +C 21 0A 75 -2,-0.3 -13,-0.2 -13,-0.2 31,-0.2 -0.701 43.8 175.4 -77.0 115.9 14.5 9.7 6.6 35 35 A E E -C 20 0A 10 -15,-2.5 -15,-2.4 -2,-0.6 29,-0.1 -0.995 27.1-122.4-124.6 131.3 14.0 6.0 5.7 36 36 A P E >> -C 19 0A 0 0, 0.0 3,-1.5 0, 0.0 4,-1.3 -0.304 23.0-114.1 -70.9 154.6 16.4 3.2 7.1 37 37 A E T 34 S+ 0 0 74 -19,-2.3 5,-0.1 1,-0.3 -18,-0.1 0.747 117.1 64.1 -55.9 -28.3 18.3 0.9 4.7 38 38 A E T 34 S+ 0 0 129 -20,-0.3 -1,-0.3 1,-0.2 -19,-0.1 0.797 110.4 36.8 -66.3 -31.9 16.1 -2.0 6.2 39 39 A N T <4 S+ 0 0 29 -3,-1.5 24,-2.0 24,-0.1 2,-0.4 0.586 100.2 94.8 -93.9 -18.5 13.0 -0.3 4.6 40 40 A L B < -D 62 0A 16 -4,-1.3 22,-0.2 22,-0.2 24,-0.0 -0.666 47.4-177.4 -76.8 124.9 15.0 0.9 1.5 41 41 A D + 0 0 109 20,-1.7 20,-0.4 -2,-0.4 3,-0.2 0.008 60.1 101.7-103.5 23.8 14.6 -1.6 -1.5 42 42 A C > + 0 0 1 18,-0.2 4,-1.0 1,-0.2 5,-0.1 -0.839 32.2 158.1-112.5 89.7 17.0 0.8 -3.4 43 43 A P H > S+ 0 0 100 0, 0.0 4,-2.5 0, 0.0 5,-0.2 0.811 77.6 60.8 -73.6 -33.0 20.7 -0.7 -3.4 44 44 A E H > S+ 0 0 99 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.914 106.0 43.7 -57.0 -50.2 21.4 1.4 -6.5 45 45 A L H > S+ 0 0 18 2,-0.2 4,-1.9 1,-0.2 -37,-0.3 0.839 113.5 51.0 -70.2 -36.8 20.8 4.8 -4.7 46 46 A I H X S+ 0 0 28 -4,-1.0 4,-1.9 2,-0.2 -2,-0.2 0.948 113.7 44.1 -65.2 -49.7 22.7 3.7 -1.6 47 47 A E H X S+ 0 0 130 -4,-2.5 4,-2.2 1,-0.2 -2,-0.2 0.935 114.7 49.1 -58.0 -50.6 25.8 2.6 -3.6 48 48 A A H X S+ 0 0 45 -4,-2.4 4,-1.3 1,-0.2 -1,-0.2 0.852 109.8 52.3 -60.6 -38.8 25.7 5.8 -5.8 49 49 A F H X S+ 0 0 20 -4,-1.9 4,-1.4 2,-0.2 -1,-0.2 0.879 110.4 47.0 -64.1 -42.9 25.4 8.0 -2.7 50 50 A L H X S+ 0 0 55 -4,-1.9 4,-1.1 1,-0.2 -2,-0.2 0.851 110.6 53.3 -68.5 -35.5 28.5 6.4 -1.1 51 51 A N H < S+ 0 0 97 -4,-2.2 -2,-0.2 1,-0.2 -1,-0.2 0.782 106.3 54.1 -66.4 -31.3 30.3 6.8 -4.4 52 52 A S H < S+ 0 0 101 -4,-1.3 -2,-0.2 1,-0.2 -1,-0.2 0.861 107.8 49.0 -69.7 -38.9 29.3 10.6 -4.3 53 53 A Q H < 0 0 118 -4,-1.4 -2,-0.2 -5,-0.1 -1,-0.2 0.743 360.0 360.0 -72.0 -27.7 30.9 11.0 -0.8 54 54 A K < 0 0 231 -4,-1.1 -3,-0.2 -5,-0.1 -2,-0.1 0.597 360.0 360.0-107.4 360.0 34.1 9.3 -2.0 55 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 56 1 B A 0 0 146 0, 0.0 2,-0.8 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -24.7 14.9 4.5 -19.4 57 2 B R - 0 0 224 2,-0.0 2,-1.3 1,-0.0 0, 0.0 -0.839 360.0-157.9 -97.3 104.2 12.8 5.1 -16.3 58 3 B T + 0 0 105 -2,-0.8 2,-0.5 2,-0.0 -1,-0.0 -0.696 22.3 170.8 -85.5 86.8 15.0 4.6 -13.2 59 4 B K - 0 0 148 -2,-1.3 2,-0.4 -34,-0.0 -53,-0.1 -0.892 11.1-173.8-100.0 131.2 12.4 3.8 -10.4 60 5 B Q E -A 5 0A 35 -55,-1.1 -55,-2.4 -2,-0.5 2,-0.3 -0.981 17.1-134.8-123.4 137.8 13.6 2.6 -7.0 61 6 B T E +A 4 0A 45 -20,-0.4 -20,-1.7 -2,-0.4 2,-0.3 -0.654 23.5 174.0 -97.7 147.4 11.1 1.5 -4.2 62 7 B A E -AD 3 40A 0 -59,-1.9 -59,-1.8 -2,-0.3 2,-0.4 -0.982 22.1-138.4-151.1 144.0 11.2 2.4 -0.5 63 8 B R E -A 2 0A 150 -24,-2.0 2,-0.4 -2,-0.3 -61,-0.2 -0.881 25.1-120.7-106.7 130.7 8.8 1.8 2.4 64 9 B X - 0 0 75 -63,-1.1 2,-1.6 -2,-0.4 -29,-0.1 -0.626 22.3-127.8 -76.4 122.9 8.0 4.5 5.0 65 10 B S - 0 0 47 -2,-0.4 2,-1.5 -31,-0.2 -1,-0.1 -0.579 24.6-170.2 -72.1 84.8 9.0 3.5 8.5 66 11 B T - 0 0 141 -2,-1.6 2,-0.2 2,-0.0 -1,-0.1 -0.695 69.8 -23.3 -78.8 86.5 5.7 4.2 10.3 67 12 B G S S- 0 0 60 -2,-1.5 2,-0.2 1,-0.1 -2,-0.0 -0.702 83.1 -98.8 101.8-157.3 7.1 3.7 13.8 68 13 B G - 0 0 63 -2,-0.2 2,-1.4 0, 0.0 -1,-0.1 -0.735 17.6-128.9-172.0 112.9 10.2 1.7 14.7 69 14 B K 0 0 213 -2,-0.2 -2,-0.0 1,-0.2 0, 0.0 -0.540 360.0 360.0 -73.8 89.0 10.4 -1.9 16.1 70 15 B A 0 0 154 -2,-1.4 -1,-0.2 0, 0.0 -55,-0.0 0.725 360.0 360.0 -99.5 360.0 12.7 -1.5 19.2