==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-FEB-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 02-AUG-10 2L1P . COMPND 2 MOLECULE: DNA-BINDING PROTEIN SATB1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR G.V.T.SWAPNA,A.F.MONTELIONE,R.SHASTRY,C.CICCOSANTI,H.JANJUA, . 83 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7084.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 48 57.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 12.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 6.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 32 38.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 241 0, 0.0 2,-1.0 0, 0.0 4,-0.0 0.000 360.0 360.0 360.0-178.7 16.9 -11.3 11.8 2 2 A G + 0 0 76 2,-0.0 2,-0.7 3,-0.0 0, 0.0 -0.708 360.0 50.2 84.3-103.3 20.5 -12.0 12.8 3 3 A H S S- 0 0 150 -2,-1.0 2,-1.4 1,-0.1 0, 0.0 -0.630 92.8-126.2 -73.2 111.2 22.6 -10.8 9.8 4 4 A H - 0 0 191 -2,-0.7 2,-0.3 1,-0.0 -1,-0.1 -0.387 35.5-171.5 -64.7 88.4 21.3 -7.3 9.1 5 5 A H - 0 0 154 -2,-1.4 2,-0.4 -4,-0.0 -1,-0.0 -0.651 7.8-157.3 -86.3 139.3 20.4 -7.6 5.3 6 6 A H - 0 0 171 -2,-0.3 2,-0.4 2,-0.0 3,-0.0 -0.940 17.0-123.7-117.0 138.4 19.4 -4.5 3.3 7 7 A H - 0 0 134 -2,-0.4 -2,-0.0 1,-0.1 0, 0.0 -0.654 8.0-158.8 -82.1 128.8 17.4 -4.6 0.1 8 8 A H S S+ 0 0 171 -2,-0.4 -1,-0.1 2,-0.1 2,-0.0 0.687 71.6 91.9 -76.4 -19.7 19.0 -3.0 -3.0 9 9 A S S S- 0 0 76 1,-0.0 2,-0.5 2,-0.0 -2,-0.1 -0.266 76.7-127.4 -70.0 163.8 15.5 -2.6 -4.5 10 10 A H > - 0 0 96 3,-0.1 5,-0.5 1,-0.1 -2,-0.1 -0.954 21.6-174.8-126.6 119.0 13.5 0.6 -3.9 11 11 A M T 5S+ 0 0 98 -2,-0.5 -1,-0.1 1,-0.2 -2,-0.0 0.425 81.6 72.1 -87.5 -0.1 9.9 0.8 -2.5 12 12 A L T 5S+ 0 0 130 1,-0.1 -1,-0.2 2,-0.0 67,-0.1 0.906 96.2 48.0 -82.3 -47.9 9.8 4.6 -3.1 13 13 A P T 5S- 0 0 57 0, 0.0 2,-2.3 0, 0.0 3,-0.3 -0.805 99.7-107.9 -89.9 137.3 9.6 4.5 -7.0 14 14 A P T 5 + 0 0 59 0, 0.0 3,-0.1 0, 0.0 -3,-0.1 -0.375 60.6 148.2 -63.2 77.8 6.9 2.1 -8.5 15 15 A E S - 0 0 53 -2,-1.3 4,-2.7 1,-0.1 5,-0.3 -0.390 53.5 -91.0 -81.1 168.9 4.2 -7.6 -6.1 19 19 A H H > S+ 0 0 79 1,-0.2 4,-2.5 2,-0.2 5,-0.2 0.888 129.8 46.4 -46.6 -48.9 2.1 -9.2 -3.3 20 20 A T H > S+ 0 0 90 2,-0.2 4,-2.7 1,-0.2 5,-0.2 0.950 111.9 50.5 -58.9 -51.4 5.0 -8.7 -0.8 21 21 A T H > S+ 0 0 43 1,-0.2 4,-0.9 2,-0.2 -2,-0.2 0.921 116.3 40.3 -55.1 -50.0 5.6 -5.1 -1.9 22 22 A V H X S+ 0 0 3 -4,-2.7 4,-2.8 2,-0.2 3,-0.4 0.913 114.6 52.0 -67.1 -44.0 2.0 -4.1 -1.5 23 23 A R H X S+ 0 0 93 -4,-2.5 4,-1.8 -5,-0.3 -2,-0.2 0.908 108.5 50.6 -61.9 -43.8 1.4 -6.0 1.7 24 24 A N H < S+ 0 0 86 -4,-2.7 4,-0.3 -5,-0.2 -1,-0.2 0.733 113.6 47.5 -66.7 -23.6 4.5 -4.5 3.4 25 25 A A H >X S+ 0 0 29 -4,-0.9 3,-1.3 -3,-0.4 4,-1.2 0.916 108.7 51.9 -80.0 -48.5 3.1 -1.0 2.4 26 26 A L H 3X S+ 0 0 3 -4,-2.8 4,-3.0 1,-0.3 5,-0.3 0.862 98.6 65.2 -56.6 -39.9 -0.5 -1.6 3.6 27 27 A K H 3X S+ 0 0 97 -4,-1.8 4,-0.8 1,-0.2 -1,-0.3 0.722 104.3 46.4 -63.4 -21.1 0.5 -2.7 7.1 28 28 A D H <4 S+ 0 0 78 -3,-1.3 4,-0.4 -4,-0.3 -1,-0.2 0.805 113.9 46.6 -87.7 -33.8 1.9 0.8 7.9 29 29 A L H >X S+ 0 0 63 -4,-1.2 4,-2.1 -3,-0.2 3,-0.9 0.939 114.5 48.0 -68.6 -45.4 -1.1 2.6 6.5 30 30 A L H 3< S+ 0 0 40 -4,-3.0 -2,-0.2 1,-0.2 -3,-0.2 0.838 98.8 66.3 -66.1 -37.1 -3.6 0.4 8.4 31 31 A K T 3< S+ 0 0 123 -4,-0.8 -1,-0.2 -5,-0.3 -2,-0.1 0.711 120.5 21.7 -65.4 -17.7 -1.8 0.5 11.8 32 32 A D T <4 S+ 0 0 135 -3,-0.9 2,-0.5 -4,-0.4 -1,-0.2 0.539 121.8 61.2-119.8 -18.1 -2.7 4.3 12.0 33 33 A M S < S- 0 0 62 -4,-2.1 -1,-0.2 -5,-0.1 5,-0.1 -0.957 88.6-117.7-114.6 123.3 -5.7 4.5 9.6 34 34 A N > - 0 0 123 -2,-0.5 4,-2.4 1,-0.1 5,-0.2 -0.155 27.5-110.2 -57.8 149.6 -8.8 2.4 10.4 35 35 A Q H > S+ 0 0 97 1,-0.2 4,-2.7 2,-0.2 5,-0.2 0.895 117.3 38.7 -48.1 -55.2 -9.8 -0.3 7.8 36 36 A S H > S+ 0 0 67 1,-0.2 4,-1.3 2,-0.2 -1,-0.2 0.913 115.2 52.7 -65.4 -44.1 -12.9 1.5 6.6 37 37 A S H > S+ 0 0 43 2,-0.2 4,-0.9 1,-0.2 -1,-0.2 0.802 113.5 45.9 -62.6 -29.4 -11.3 4.9 6.7 38 38 A L H >X S+ 0 0 11 -4,-2.4 4,-1.9 2,-0.2 3,-0.5 0.948 112.4 47.3 -75.8 -53.6 -8.4 3.6 4.6 39 39 A A H 3< S+ 0 0 17 -4,-2.7 -2,-0.2 -5,-0.2 -1,-0.2 0.645 103.7 69.1 -63.2 -15.0 -10.7 1.7 2.0 40 40 A K H 3< S+ 0 0 170 -4,-1.3 -1,-0.2 -5,-0.2 -2,-0.2 0.950 112.4 24.8 -67.1 -52.5 -12.7 5.0 1.9 41 41 A E H << S+ 0 0 98 -4,-0.9 -2,-0.2 -3,-0.5 -1,-0.2 0.631 113.5 82.5 -89.3 -15.3 -10.0 7.0 0.1 42 42 A C S < S- 0 0 7 -4,-1.9 4,-0.1 -5,-0.1 27,-0.0 -0.727 77.4-138.1 -89.5 138.7 -8.3 3.9 -1.4 43 43 A P S S+ 0 0 89 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 0.286 73.3 101.5 -80.1 12.7 -9.9 2.5 -4.7 44 44 A L S S- 0 0 21 1,-0.1 2,-0.4 25,-0.0 -2,-0.1 -0.497 84.1 -93.0 -94.9 165.9 -9.5 -1.1 -3.3 45 45 A S > - 0 0 69 -2,-0.2 4,-2.5 1,-0.1 5,-0.2 -0.674 29.5-138.8 -83.9 128.0 -12.1 -3.4 -1.8 46 46 A Q H > S+ 0 0 92 -2,-0.4 4,-2.5 1,-0.2 5,-0.2 0.910 99.8 41.9 -52.2 -59.2 -12.3 -3.2 2.0 47 47 A S H > S+ 0 0 84 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.837 112.5 56.2 -63.8 -33.0 -12.8 -7.0 2.9 48 48 A M H > S+ 0 0 63 2,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.946 108.8 46.4 -61.2 -48.6 -10.1 -7.9 0.2 49 49 A I H X S+ 0 0 11 -4,-2.5 4,-2.2 1,-0.2 -2,-0.2 0.944 113.1 49.9 -56.6 -48.8 -7.6 -5.6 2.0 50 50 A S H X S+ 0 0 39 -4,-2.5 4,-1.5 1,-0.2 -1,-0.2 0.871 110.9 50.2 -57.0 -39.4 -8.6 -7.1 5.3 51 51 A S H < S+ 0 0 47 -4,-2.4 -1,-0.2 -5,-0.2 -2,-0.2 0.857 108.5 52.1 -69.5 -37.1 -8.1 -10.6 3.9 52 52 A I H >< S+ 0 0 6 -4,-2.2 3,-1.4 2,-0.2 -2,-0.2 0.934 108.8 49.0 -65.4 -47.0 -4.7 -9.8 2.5 53 53 A V H 3< S+ 0 0 26 -4,-2.2 -1,-0.2 1,-0.3 -2,-0.2 0.882 123.6 32.5 -60.9 -39.4 -3.3 -8.5 5.8 54 54 A N T 3< S+ 0 0 110 -4,-1.5 2,-1.2 -5,-0.2 -1,-0.3 0.018 82.7 154.4-106.3 26.4 -4.6 -11.6 7.7 55 55 A S < + 0 0 37 -3,-1.4 -3,-0.1 1,-0.2 -4,-0.1 -0.379 5.8 146.1 -62.4 92.1 -4.1 -14.0 4.7 56 56 A T S S- 0 0 125 -2,-1.2 -1,-0.2 -5,-0.1 -4,-0.0 0.899 87.7 -3.6 -88.6 -64.3 -3.7 -17.3 6.5 57 57 A Y S S+ 0 0 207 -3,-0.2 3,-0.3 2,-0.0 -2,-0.1 0.471 120.2 85.2-105.3 -8.8 -5.3 -19.8 4.0 58 58 A Y + 0 0 69 -4,-0.2 2,-3.1 1,-0.2 -6,-0.1 0.988 44.0 136.5 -55.0 -74.8 -6.4 -17.0 1.6 59 59 A A + 0 0 62 -8,-0.2 2,-1.0 1,-0.1 -1,-0.2 -0.267 39.3 100.5 63.9 -67.9 -3.1 -16.7 -0.4 60 60 A N + 0 0 145 -2,-3.1 2,-0.4 -3,-0.3 -1,-0.1 -0.311 52.8 163.2 -54.5 92.0 -4.9 -16.5 -3.9 61 61 A V - 0 0 37 -2,-1.0 -42,-0.1 -9,-0.0 2,-0.1 -0.916 37.9-112.2-118.0 143.1 -4.8 -12.7 -4.5 62 62 A S - 0 0 60 -2,-0.4 -1,-0.0 1,-0.1 0, 0.0 -0.363 10.6-148.4 -70.1 149.2 -5.4 -10.8 -7.8 63 63 A A S >> S+ 0 0 60 2,-0.1 4,-2.1 1,-0.1 3,-1.5 0.762 89.9 69.2 -87.7 -28.6 -2.5 -8.9 -9.4 64 64 A A H 3> S+ 0 0 49 1,-0.3 4,-2.7 2,-0.2 5,-0.4 0.948 94.5 53.7 -55.7 -53.5 -4.7 -6.1 -10.9 65 65 A K H 34 S+ 0 0 25 1,-0.2 -1,-0.3 2,-0.2 -2,-0.1 0.530 111.3 50.7 -61.6 -5.8 -5.6 -4.6 -7.6 66 66 A C H <> S+ 0 0 9 -3,-1.5 4,-1.8 2,-0.1 -1,-0.2 0.816 110.3 44.2 -95.8 -45.9 -1.8 -4.4 -7.0 67 67 A Q H X S+ 0 0 129 -4,-2.1 4,-1.2 1,-0.2 -2,-0.2 0.916 115.5 48.8 -64.8 -44.6 -0.7 -2.7 -10.3 68 68 A E H X S+ 0 0 105 -4,-2.7 4,-2.6 1,-0.2 -1,-0.2 0.796 106.8 58.3 -64.5 -27.9 -3.6 -0.2 -10.0 69 69 A F H > S+ 0 0 4 -5,-0.4 4,-2.5 2,-0.2 -2,-0.2 0.900 103.9 50.6 -66.0 -41.5 -2.5 0.4 -6.4 70 70 A G H X S+ 0 0 7 -4,-1.8 4,-0.8 2,-0.2 -2,-0.2 0.771 111.2 49.2 -65.4 -27.4 0.9 1.4 -7.8 71 71 A R H X S+ 0 0 173 -4,-1.2 4,-1.4 2,-0.2 3,-0.5 0.906 111.2 47.9 -74.3 -46.0 -0.9 3.8 -10.1 72 72 A W H X S+ 0 0 37 -4,-2.6 4,-2.6 1,-0.2 -2,-0.2 0.868 102.2 66.0 -59.0 -38.4 -3.0 5.2 -7.3 73 73 A Y H X S+ 0 0 29 -4,-2.5 4,-2.5 1,-0.2 5,-0.5 0.885 100.9 49.5 -49.8 -44.1 0.3 5.6 -5.3 74 74 A K H X S+ 0 0 35 -4,-0.8 4,-2.2 -3,-0.5 5,-0.3 0.932 114.0 43.3 -62.8 -48.3 1.4 8.2 -7.9 75 75 A H H < S+ 0 0 159 -4,-1.4 -2,-0.2 2,-0.2 -1,-0.2 0.773 115.6 51.4 -70.3 -26.4 -1.9 10.2 -7.6 76 76 A F H < S+ 0 0 95 -4,-2.6 -2,-0.2 -5,-0.2 -1,-0.2 0.943 126.4 19.0 -76.1 -51.8 -1.8 9.8 -3.8 77 77 A K H < S- 0 0 105 -4,-2.5 -3,-0.2 -5,-0.2 -2,-0.2 0.752 85.8-144.9 -92.5 -28.0 1.7 11.1 -3.0 78 78 A K < + 0 0 131 -4,-2.2 2,-0.8 -5,-0.5 -3,-0.1 0.951 25.4 178.9 58.8 53.3 2.4 13.0 -6.3 79 79 A T - 0 0 59 -5,-0.3 -1,-0.2 -6,-0.2 -4,-0.1 0.004 49.2 -90.8 -80.1 33.6 6.1 11.9 -6.1 80 80 A K S S+ 0 0 176 -2,-0.8 -1,-0.2 -6,-0.2 -2,-0.1 0.178 97.6 85.0 66.7 160.9 7.1 13.6 -9.4 81 81 A D + 0 0 121 1,-0.2 2,-0.4 -3,-0.1 -2,-0.1 0.877 55.1 179.5 70.1 97.5 6.9 11.8 -12.8 82 82 A M 0 0 122 -4,-0.1 -1,-0.2 1,-0.1 -2,-0.0 -0.837 360.0 360.0-140.8 97.8 3.2 12.2 -14.0 83 83 A M 0 0 256 -2,-0.4 -1,-0.1 0, 0.0 0, 0.0 -0.297 360.0 360.0 57.2 360.0 1.9 10.7 -17.3