==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-SEP-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIGASE 10-DEC-09 3L11 . COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE RNF168; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR D.NECULAI,L.YERMEKBAYEVA,L.CROMBET,J.WEIGELT,C.BOUNTRA,A.M.E . 104 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7461.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 54.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 9 8.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 4.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 31 29.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A S 0 0 159 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -81.9 3.0 10.5 10.2 2 1 A M - 0 0 162 1,-0.2 0, 0.0 3,-0.0 0, 0.0 -0.559 360.0 -66.9-108.9 173.2 -0.5 11.6 9.1 3 2 A A - 0 0 82 -2,-0.2 -1,-0.2 1,-0.1 3,-0.0 -0.137 48.4-121.8 -46.9 133.5 -3.1 14.4 9.5 4 3 A L - 0 0 72 1,-0.1 3,-0.1 4,-0.0 -1,-0.1 -0.794 34.7-115.2 -79.5 126.7 -4.5 14.9 13.0 5 4 A P > - 0 0 89 0, 0.0 3,-2.1 0, 0.0 -1,-0.1 -0.206 48.4 -75.2 -60.7 154.8 -8.3 14.5 12.7 6 5 A K T 3 S- 0 0 178 1,-0.3 3,-0.1 -3,-0.0 -3,-0.0 -0.258 116.0 -0.8 -56.8 132.7 -10.2 17.7 13.5 7 6 A D T 3 S+ 0 0 140 1,-0.2 -1,-0.3 -3,-0.1 2,-0.1 0.551 96.1 145.6 65.0 7.3 -10.4 18.3 17.3 8 7 A A < - 0 0 28 -3,-2.1 -1,-0.2 1,-0.1 -4,-0.0 -0.513 53.9-121.3 -76.3 148.4 -8.4 15.1 18.0 9 8 A I - 0 0 133 -2,-0.1 2,-0.1 -3,-0.1 -1,-0.1 -0.781 30.6-136.0 -81.6 119.5 -6.0 15.1 21.0 10 9 A P - 0 0 11 0, 0.0 2,-0.1 0, 0.0 5,-0.0 -0.420 21.6-105.3 -77.6 150.0 -2.5 14.3 19.6 11 10 A S > - 0 0 61 1,-0.1 4,-1.0 -2,-0.1 3,-0.2 -0.449 25.2-120.3 -66.9 151.1 -0.3 11.9 21.4 12 11 A L H >> S+ 0 0 70 1,-0.2 3,-1.3 2,-0.2 4,-0.5 0.914 113.5 59.8 -50.6 -44.6 2.6 13.4 23.4 13 12 A S H >4 S+ 0 0 78 1,-0.3 3,-0.9 2,-0.2 -1,-0.2 0.867 102.1 50.7 -66.4 -29.8 5.0 11.4 21.3 14 13 A E H 34 S+ 0 0 108 -3,-0.2 -1,-0.3 1,-0.2 -2,-0.2 0.752 109.6 53.8 -67.9 -26.7 3.8 13.1 18.1 15 14 A C H << S+ 0 0 5 -3,-1.3 9,-3.0 -4,-1.0 2,-0.3 0.396 89.5 97.2 -92.3 -0.2 4.3 16.5 19.9 16 15 A Q B << S-A 23 0A 54 -3,-0.9 2,-0.3 -4,-0.5 7,-0.3 -0.676 84.7-109.3 -88.9 146.7 7.9 15.8 20.8 17 16 A C > - 0 0 0 5,-3.5 4,-2.1 -2,-0.3 19,-0.1 -0.563 22.8-142.2 -72.1 129.3 10.8 17.1 18.7 18 17 A G T 4 S+ 0 0 45 17,-0.5 -1,-0.2 -2,-0.3 18,-0.1 0.549 96.4 51.0 -72.2 -4.8 12.4 14.0 17.0 19 18 A I T 4 S+ 0 0 43 3,-0.1 -1,-0.2 1,-0.0 17,-0.1 0.881 127.9 12.8 -93.6 -47.7 15.8 15.6 17.4 20 19 A C T 4 S- 0 0 43 2,-0.2 -2,-0.2 3,-0.0 3,-0.1 0.507 89.3-130.8-112.6 -4.2 16.0 16.5 21.0 21 20 A M < + 0 0 107 -4,-2.1 2,-0.2 1,-0.2 -3,-0.1 0.445 66.3 125.3 63.6 1.3 12.9 14.6 22.4 22 21 A E S S- 0 0 109 1,-0.2 -5,-3.5 -6,-0.1 -1,-0.2 -0.559 79.7 -78.3 -77.5 157.7 11.6 17.7 24.3 23 22 A I B -A 16 0A 13 -7,-0.3 2,-0.3 -2,-0.2 -7,-0.3 -0.244 61.8 -96.4 -44.6 138.4 8.0 18.9 23.6 24 23 A L - 0 0 9 -9,-3.0 2,-0.4 -3,-0.1 -1,-0.1 -0.502 44.7-167.4 -64.6 121.2 8.1 20.8 20.3 25 24 A V S S- 0 0 22 -2,-0.3 13,-2.3 1,-0.2 3,-0.1 -0.967 70.3 -10.9-114.1 134.7 8.4 24.5 20.9 26 25 A E S S- 0 0 79 -2,-0.4 12,-0.3 11,-0.2 -1,-0.2 0.936 94.1-142.0 44.0 59.0 7.8 27.1 18.1 27 26 A P - 0 0 0 0, 0.0 47,-3.1 0, 0.0 2,-0.5 -0.256 13.5-152.4 -59.7 137.5 7.8 24.1 15.7 28 27 A V E -BC 36 73B 0 8,-3.1 8,-2.1 45,-0.3 2,-0.6 -0.966 5.9-159.9-108.4 120.7 9.5 24.6 12.3 29 28 A T E -B 35 0B 28 43,-0.6 6,-0.3 -2,-0.5 48,-0.0 -0.931 12.1-144.2-105.9 119.2 8.1 22.4 9.5 30 29 A L > - 0 0 1 4,-3.2 3,-2.1 -2,-0.6 29,-0.1 -0.261 30.1-103.1 -75.6 164.9 10.4 22.1 6.6 31 30 A P T 3 S+ 0 0 46 0, 0.0 -1,-0.1 0, 0.0 28,-0.0 0.711 122.7 64.2 -74.9 -13.9 9.0 21.9 3.1 32 31 A C T 3 S- 0 0 27 2,-0.1 3,-0.1 25,-0.1 -2,-0.0 0.318 121.2-110.6 -74.6 4.9 9.6 18.2 3.0 33 32 A N S < S+ 0 0 131 -3,-2.1 2,-0.3 1,-0.3 -4,-0.0 0.546 75.4 134.1 70.3 15.8 7.0 18.1 5.9 34 33 A H - 0 0 69 2,-0.0 -4,-3.2 0, 0.0 2,-0.4 -0.737 40.5-154.7 -90.2 144.6 9.5 17.2 8.6 35 34 A T E +B 29 0B 33 -2,-0.3 -17,-0.5 -6,-0.3 2,-0.3 -0.872 19.4 167.2-119.7 145.9 9.2 19.2 11.8 36 35 A L E -B 28 0B 0 -8,-2.1 -8,-3.1 -2,-0.4 -19,-0.1 -0.974 42.8 -89.1-148.3 162.8 11.6 20.1 14.5 37 36 A C > - 0 0 0 -2,-0.3 4,-2.5 -10,-0.2 -11,-0.2 -0.381 40.4-112.5 -72.1 158.3 11.6 22.6 17.4 38 37 A K H > S+ 0 0 45 -13,-2.3 4,-2.5 -12,-0.3 5,-0.2 0.929 117.3 53.9 -58.3 -48.2 12.9 26.1 16.7 39 38 A P H > S+ 0 0 50 0, 0.0 4,-2.2 0, 0.0 -1,-0.2 0.935 111.8 45.7 -50.6 -47.3 16.0 25.6 19.0 40 39 A C H > S+ 0 0 13 1,-0.2 4,-3.5 2,-0.2 5,-0.5 0.890 109.8 54.6 -60.4 -38.5 16.9 22.4 17.1 41 40 A F H X>S+ 0 0 0 -4,-2.5 5,-2.8 2,-0.2 4,-1.3 0.905 107.8 49.7 -60.5 -41.7 16.3 24.1 13.8 42 41 A Q H <>S+ 0 0 84 -4,-2.5 5,-2.7 3,-0.2 -2,-0.2 0.969 121.2 35.0 -66.5 -42.7 18.8 26.8 14.8 43 42 A S H <5S+ 0 0 61 -4,-2.2 -2,-0.2 -5,-0.2 -1,-0.2 0.825 126.8 31.5 -75.9 -43.8 21.4 24.3 15.8 44 43 A T H <5S+ 0 0 12 -4,-3.5 5,-0.5 -5,-0.2 7,-0.3 0.547 136.7 13.6 -98.5 -8.1 21.0 21.4 13.5 45 44 A V T ><>S+ 0 0 0 -4,-1.3 5,-2.1 -5,-0.5 3,-0.7 0.662 122.9 41.9-127.8 -63.6 19.9 23.4 10.4 46 45 A E T 3 - 0 0 0 5,-2.7 4,-2.0 -2,-0.3 5,-0.1 -0.440 31.0-140.2 -59.6 127.5 16.5 18.7 6.7 53 52 A P T 4 S+ 0 0 21 0, 0.0 -1,-0.2 0, 0.0 51,-0.0 0.617 98.5 49.4 -69.6 -9.0 18.0 16.6 9.5 54 53 A F T 4 S+ 0 0 88 3,-0.1 -2,-0.0 -20,-0.0 -19,-0.0 0.785 132.7 5.4 -93.6 -36.6 15.5 13.8 8.6 55 54 A C T 4 S- 0 0 56 2,-0.1 -3,-0.0 -21,-0.0 0, 0.0 0.424 90.5-119.3-131.6 -1.9 15.8 13.5 4.8 56 55 A R < + 0 0 135 -4,-2.0 2,-0.2 1,-0.2 3,-0.0 0.611 51.0 164.2 70.9 11.0 18.6 15.9 3.8 57 56 A R - 0 0 119 -6,-0.1 -5,-2.7 1,-0.1 -1,-0.2 -0.454 45.8-110.4 -53.1 129.9 16.4 18.0 1.7 58 57 A R B +D 51 0C 160 -7,-0.2 -7,-0.3 -2,-0.2 -8,-0.1 -0.447 42.3 171.4 -67.9 137.3 18.2 21.3 1.0 59 58 A V > + 0 0 1 -9,-2.7 4,-2.2 -10,-0.2 -8,-0.2 0.056 38.7 110.9-138.9 22.5 16.5 24.1 2.8 60 59 A S H > S+ 0 0 18 -10,-0.5 4,-2.2 2,-0.2 5,-0.1 0.932 87.0 39.2 -69.0 -46.6 18.8 27.2 2.4 61 60 A S H > S+ 0 0 47 2,-0.2 4,-2.8 1,-0.2 5,-0.2 0.886 115.7 53.0 -69.1 -43.7 16.5 29.2 0.1 62 61 A W H > S+ 0 0 46 1,-0.2 4,-2.1 2,-0.2 5,-0.2 0.911 110.5 48.8 -54.7 -41.3 13.5 28.1 2.1 63 62 A T H X S+ 0 0 7 -4,-2.2 4,-1.9 2,-0.2 5,-0.2 0.933 112.4 46.2 -68.4 -43.2 15.3 29.4 5.2 64 63 A R H X S+ 0 0 140 -4,-2.2 4,-2.4 2,-0.2 5,-0.2 0.963 111.7 54.4 -59.9 -45.0 16.2 32.8 3.7 65 64 A Y H X S+ 0 0 123 -4,-2.8 4,-0.8 1,-0.3 -2,-0.2 0.909 117.0 33.4 -54.8 -53.6 12.7 33.1 2.4 66 65 A H H <>S+ 0 0 38 -4,-2.1 5,-3.0 2,-0.2 6,-0.4 0.692 112.0 59.2 -81.1 -23.4 11.0 32.6 5.7 67 66 A T H ><5S+ 0 0 55 -4,-1.9 3,-1.5 3,-0.2 -2,-0.2 0.946 108.8 49.2 -67.9 -42.3 13.6 34.2 7.9 68 67 A R H 3<5S+ 0 0 191 -4,-2.4 -2,-0.2 1,-0.3 -1,-0.2 0.788 117.4 39.0 -65.8 -29.8 13.0 37.4 5.9 69 68 A R T 3<5S- 0 0 127 -4,-0.8 -1,-0.3 -5,-0.2 -2,-0.2 0.282 107.3-126.1-102.4 10.0 9.2 37.1 6.3 70 69 A N T < 5S+ 0 0 148 -3,-1.5 -3,-0.2 1,-0.1 3,-0.1 0.861 74.2 123.3 42.2 49.8 9.5 35.9 9.9 71 70 A S < + 0 0 49 -5,-3.0 -4,-0.2 1,-0.1 -1,-0.1 -0.121 18.7 118.0-127.6 36.4 7.5 32.9 9.1 72 71 A L + 0 0 14 -6,-0.4 -43,-0.6 -5,-0.1 2,-0.3 0.892 58.4 82.9 -68.1 -36.3 9.7 30.0 10.1 73 72 A V B S-C 28 0B 28 -45,-0.2 2,-1.2 -3,-0.1 -45,-0.3 -0.478 81.3-129.8 -77.8 134.3 7.2 28.7 12.7 74 73 A N > - 0 0 44 -47,-3.1 4,-2.3 -2,-0.3 5,-0.2 -0.681 28.5-168.0 -79.3 98.8 4.4 26.5 11.7 75 74 A V H > S+ 0 0 98 -2,-1.2 4,-2.7 1,-0.2 -1,-0.2 0.870 78.0 50.7 -68.3 -36.4 1.7 28.6 13.5 76 75 A E H > S+ 0 0 143 2,-0.2 4,-1.7 1,-0.2 -1,-0.2 0.888 113.8 45.0 -69.6 -39.1 -1.2 26.1 13.2 77 76 A L H > S+ 0 0 48 2,-0.2 4,-2.6 1,-0.2 -1,-0.2 0.898 112.4 52.1 -65.3 -41.0 0.9 23.3 14.6 78 77 A W H X S+ 0 0 41 -4,-2.3 4,-2.2 1,-0.2 5,-0.2 0.930 107.4 53.6 -63.5 -41.1 2.3 25.5 17.3 79 78 A T H X S+ 0 0 78 -4,-2.7 4,-1.9 1,-0.2 -1,-0.2 0.927 109.6 47.7 -52.7 -49.1 -1.3 26.4 18.2 80 79 A I H X S+ 0 0 61 -4,-1.7 4,-2.1 2,-0.2 5,-0.3 0.890 109.5 52.0 -64.6 -41.0 -2.2 22.8 18.6 81 80 A I H X S+ 0 0 1 -4,-2.6 4,-2.8 1,-0.2 -1,-0.2 0.949 112.0 44.9 -61.0 -48.9 0.8 21.9 20.7 82 81 A Q H < S+ 0 0 85 -4,-2.2 -1,-0.2 1,-0.2 -2,-0.2 0.805 111.9 54.9 -67.5 -29.5 0.1 24.7 23.2 83 82 A K H < S+ 0 0 140 -4,-1.9 -1,-0.2 -5,-0.2 -2,-0.2 0.912 120.6 27.6 -66.8 -44.3 -3.6 23.8 23.3 84 83 A H H < S+ 0 0 43 -4,-2.1 -2,-0.2 1,-0.2 -3,-0.2 0.738 134.1 28.5 -96.0 -23.9 -3.0 20.2 24.2 85 84 A Y S X S+ 0 0 40 -4,-2.8 4,-2.3 -5,-0.3 -1,-0.2 -0.370 70.4 146.5-129.3 56.1 0.3 20.2 26.1 86 85 A P H > S+ 0 0 62 0, 0.0 4,-2.1 0, 0.0 5,-0.1 0.860 72.9 50.3 -66.3 -32.4 0.3 23.7 27.6 87 86 A R H > S+ 0 0 163 2,-0.2 4,-2.7 1,-0.2 5,-0.2 0.898 108.9 52.1 -74.4 -38.7 2.2 22.7 30.8 88 87 A E H > S+ 0 0 58 2,-0.2 4,-1.7 1,-0.2 -1,-0.2 0.924 108.8 50.9 -57.8 -49.9 4.8 20.9 28.8 89 88 A C H X S+ 0 0 9 -4,-2.3 4,-2.2 1,-0.2 -2,-0.2 0.890 112.0 48.3 -57.1 -41.2 5.3 24.1 26.7 90 89 A K H X S+ 0 0 145 -4,-2.1 4,-1.2 1,-0.2 -2,-0.2 0.906 108.2 52.5 -63.0 -48.2 5.6 26.1 29.9 91 90 A L H X S+ 0 0 88 -4,-2.7 4,-0.5 2,-0.2 -1,-0.2 0.831 112.4 46.6 -56.9 -34.1 8.1 23.8 31.5 92 91 A R H >< S+ 0 0 51 -4,-1.7 3,-2.4 1,-0.2 -2,-0.2 0.968 105.2 56.8 -77.0 -46.6 10.3 24.0 28.4 93 92 A A H 3< S+ 0 0 90 -4,-2.2 -1,-0.2 1,-0.3 -2,-0.2 0.658 105.8 55.7 -53.2 -23.5 10.0 27.8 28.2 94 93 A S H 3< 0 0 105 -4,-1.2 -1,-0.3 1,-0.2 -2,-0.2 0.606 360.0 360.0 -79.0 -21.1 11.5 27.6 31.8 95 94 A G << 0 0 105 -3,-2.4 -1,-0.2 -4,-0.5 -2,-0.0 -0.528 360.0 360.0 90.0 360.0 14.6 25.6 30.6 96 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 97 104 A Y 0 0 234 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 128.1 22.3 4.9 25.1 98 105 A Q + 0 0 121 1,-0.1 3,-0.2 3,-0.0 0, 0.0 -0.834 360.0 174.0-116.6 103.6 22.9 5.6 21.4 99 106 A P S S+ 0 0 93 0, 0.0 2,-0.5 0, 0.0 -1,-0.1 0.594 79.0 60.1 -73.3 -12.4 24.9 3.2 19.1 100 107 A V + 0 0 110 3,-0.0 2,-1.0 2,-0.0 3,-0.1 -0.811 58.3 168.2-125.6 81.1 24.1 5.4 16.0 101 108 A R + 0 0 181 -2,-0.5 -3,-0.0 -3,-0.2 3,-0.0 -0.775 26.1 133.2 -97.7 87.9 25.5 9.0 16.4 102 109 A L + 0 0 161 -2,-1.0 2,-0.5 2,-0.1 -1,-0.2 0.151 37.6 94.1-126.8 16.4 25.1 10.3 12.9 103 110 A L S S- 0 0 78 -3,-0.1 2,-0.3 2,-0.0 -59,-0.0 -0.952 75.1-123.0-114.7 122.9 23.4 13.8 13.3 104 111 A S 0 0 79 -2,-0.5 -2,-0.1 1,-0.1 -56,-0.0 -0.501 360.0 360.0 -76.5 132.2 25.8 16.7 13.4 105 112 A K 0 0 165 -2,-0.3 -61,-0.2 -57,-0.1 -1,-0.1 0.061 360.0 360.0 27.3 360.0 25.7 19.0 16.6