==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 22-FEB-02 1L2N . COMPND 2 MOLECULE: UBIQUITIN-LIKE PROTEIN SMT3; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR W.SHENG,X.LIAO . 76 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5474.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 45 59.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 6.6 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 13.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 11.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 6.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 15.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 21 A E 0 0 132 0, 0.0 2,-0.3 0, 0.0 20,-0.1 0.000 360.0 360.0 360.0 -64.5 2.1 0.0 -1.2 2 22 A T - 0 0 51 2,-0.0 2,-1.0 17,-0.0 21,-0.1 -0.984 360.0-108.6-159.1 153.3 5.1 2.0 -0.2 3 23 A H + 0 0 105 -2,-0.3 2,-0.2 17,-0.2 17,-0.2 -0.775 61.8 132.2 -90.4 103.5 6.2 4.4 2.5 4 24 A I E -A 19 0A 14 15,-1.5 15,-2.6 -2,-1.0 17,-0.4 -0.770 54.0 -93.4-138.7-178.0 6.5 7.8 0.9 5 25 A N E -A 18 0A 62 13,-0.3 62,-1.7 -2,-0.2 2,-0.3 -0.748 30.0-146.0-104.0 152.0 5.5 11.4 1.5 6 26 A L E -Ab 17 67A 3 11,-3.4 11,-2.1 -2,-0.3 2,-0.3 -0.898 12.0-174.5-118.7 147.6 2.3 13.1 0.2 7 27 A K E -Ab 16 68A 73 60,-1.6 62,-1.3 -2,-0.3 2,-0.5 -0.901 4.5-166.8-145.9 111.3 1.8 16.7 -0.9 8 28 A V E -Ab 15 69A 0 7,-2.2 7,-2.1 -2,-0.3 2,-0.4 -0.881 9.3-170.0-103.0 124.8 -1.6 18.1 -1.8 9 29 A S E + b 0 70A 37 60,-2.5 62,-2.6 -2,-0.5 2,-0.3 -0.903 15.0 151.0-116.2 143.5 -1.6 21.5 -3.5 10 30 A D - 0 0 13 3,-0.4 62,-0.2 -2,-0.4 -2,-0.0 -0.973 61.0 -69.2-161.5 164.3 -4.6 23.7 -4.3 11 31 A G S S- 0 0 47 60,-0.4 -1,-0.1 -2,-0.3 61,-0.1 0.758 125.5 -19.5 -20.1 -73.6 -5.7 27.3 -4.7 12 32 A S S S+ 0 0 99 -3,-0.1 2,-0.9 1,-0.0 -1,-0.3 0.358 121.4 97.9-121.9 -3.3 -5.1 28.1 -1.1 13 33 A S + 0 0 0 58,-0.2 2,-0.4 2,-0.0 -3,-0.4 -0.804 44.3 155.9 -94.0 104.0 -5.2 24.5 0.2 14 34 A E + 0 0 112 -2,-0.9 2,-0.4 -5,-0.2 -5,-0.2 -0.945 7.6 164.7-134.5 111.7 -1.7 23.3 0.6 15 35 A I E -A 8 0A 31 -7,-2.1 -7,-2.2 -2,-0.4 2,-0.4 -0.960 13.8-167.7-127.9 144.9 -0.8 20.5 3.0 16 36 A F E +A 7 0A 126 -2,-0.4 2,-0.3 -9,-0.2 -9,-0.2 -0.980 22.2 140.4-137.5 122.6 2.3 18.3 3.3 17 37 A F E -A 6 0A 146 -11,-2.1 -11,-3.4 -2,-0.4 2,-0.3 -0.979 45.4-105.1-155.1 161.0 2.7 15.2 5.3 18 38 A K E -A 5 0A 159 -2,-0.3 2,-0.3 -13,-0.3 -13,-0.3 -0.668 34.9-176.3 -91.9 146.2 4.3 11.7 5.2 19 39 A I E -A 4 0A 37 -15,-2.6 -15,-1.5 -2,-0.3 2,-1.3 -0.981 35.4-122.9-142.1 151.1 2.2 8.6 4.7 20 40 A K S S+ 0 0 143 -2,-0.3 -17,-0.2 -17,-0.2 2,-0.2 -0.422 92.6 60.3 -90.6 58.1 2.9 4.9 4.6 21 41 A K - 0 0 92 -2,-1.3 -18,-0.2 -17,-0.4 46,-0.1 -0.705 60.4-155.2 177.6 127.7 1.5 4.5 1.1 22 42 A T + 0 0 0 -2,-0.2 33,-0.1 42,-0.1 5,-0.1 0.886 61.8 116.1 -75.9 -41.8 2.3 5.9 -2.3 23 43 A T > + 0 0 11 1,-0.2 4,-1.3 3,-0.1 33,-0.1 -0.008 39.0 174.0 -33.6 94.7 -1.2 5.5 -3.7 24 44 A P H >> + 0 0 0 0, 0.0 4,-1.5 0, 0.0 5,-0.9 0.953 69.6 61.2 -75.0 -54.1 -1.9 9.2 -4.2 25 45 A L H >5S+ 0 0 38 30,-0.4 4,-1.2 1,-0.3 31,-0.1 0.876 116.9 34.1 -37.0 -53.9 -5.3 8.9 -5.9 26 46 A R H >5S+ 0 0 170 2,-0.2 4,-0.8 3,-0.1 -1,-0.3 0.845 121.9 51.8 -72.2 -35.7 -6.5 7.2 -2.8 27 47 A R H >X5S+ 0 0 64 -4,-1.3 3,-3.1 2,-0.2 4,-2.3 0.997 112.7 38.5 -62.6 -77.9 -4.3 9.4 -0.6 28 48 A L H 3X>S+ 0 0 4 -4,-1.5 5,-1.3 1,-0.3 4,-0.8 0.836 102.6 78.2 -41.4 -39.4 -5.2 12.8 -1.8 29 49 A M H 3<X5S+ 0 0 21 -4,-2.3 3,-2.7 2,-0.2 4,-1.1 0.935 114.7 37.5 -41.8 -70.7 -5.8 14.0 2.5 32 52 A F H >X>S+ 0 0 0 -4,-0.8 4,-3.0 1,-0.3 5,-1.7 0.882 117.1 52.3 -50.0 -44.5 -6.8 16.9 0.2 33 53 A A H 34X5S+ 0 0 19 -4,-3.0 3,-3.9 1,-0.2 4,-1.0 0.860 112.3 75.4 -87.5 -42.7 -9.8 21.5 1.5 37 57 A G T 34> S- 0 0 63 1,-0.1 4,-2.1 -3,-0.1 3,-0.9 -0.736 72.9-146.6 -92.3 136.2 -2.0 4.8 -11.4 58 78 A P T 34 S+ 0 0 85 0, 0.0 4,-0.4 0, 0.0 -1,-0.1 0.533 103.5 55.2 -75.1 -6.6 -1.7 1.7 -9.3 59 79 A E T 34 S+ 0 0 154 2,-0.1 4,-0.1 3,-0.1 5,-0.1 0.527 108.9 46.1-100.0 -11.6 1.0 0.6 -11.6 60 80 A D T X> S+ 0 0 51 -3,-0.9 4,-2.4 2,-0.2 3,-1.3 0.832 106.6 54.8 -95.6 -44.5 3.1 3.8 -11.1 61 81 A L T 3< S+ 0 0 3 -4,-2.1 -2,-0.1 -6,-0.3 -39,-0.1 0.883 102.0 59.9 -56.1 -40.8 2.9 4.0 -7.3 62 82 A D T 34 S+ 0 0 122 -4,-0.4 -1,-0.3 -5,-0.2 -2,-0.2 0.787 123.6 22.9 -57.9 -27.7 4.3 0.4 -7.2 63 83 A M T <4 S+ 0 0 126 -3,-1.3 -2,-0.2 -4,-0.1 -3,-0.1 0.842 119.1 52.5-100.6 -74.3 7.2 1.9 -9.0 64 84 A E < - 0 0 110 -4,-2.4 2,-0.2 -5,-0.1 -42,-0.1 -0.066 65.4-151.6 -60.4 166.6 7.5 5.7 -8.4 65 85 A D + 0 0 97 1,-0.1 -60,-0.2 -43,-0.0 2,-0.1 -0.669 54.9 94.9-147.3 84.8 7.5 7.1 -4.9 66 86 A N - 0 0 81 -2,-0.2 2,-0.7 -62,-0.1 -60,-0.1 -0.473 49.2-158.2-175.6 94.6 6.1 10.6 -4.6 67 87 A D E +b 6 0A 0 -62,-1.7 -60,-1.6 -2,-0.1 2,-0.3 -0.727 37.6 135.9 -84.3 113.2 2.4 11.3 -3.8 68 88 A I E +b 7 0A 38 -2,-0.7 -14,-0.3 -62,-0.2 2,-0.3 -0.906 15.1 150.7-161.4 129.2 1.6 14.7 -5.0 69 89 A I E -b 8 0A 3 -62,-1.3 -60,-2.5 -2,-0.3 2,-0.4 -0.927 36.2-113.0-151.3 171.5 -1.5 16.1 -6.8 70 90 A E E -bC 9 46A 42 -24,-1.8 -24,-2.4 -18,-0.3 2,-0.6 -0.926 14.3-161.0-117.0 139.4 -3.5 19.3 -7.3 71 91 A A E - C 0 45A 0 -62,-2.6 -60,-0.4 -2,-0.4 -26,-0.2 -0.861 17.9-177.3-121.9 94.5 -7.1 19.8 -6.2 72 92 A H E - C 0 44A 82 -28,-2.4 -28,-2.6 -2,-0.6 2,-0.4 -0.133 30.7 -94.6 -79.7-179.4 -8.6 22.8 -8.0 73 93 A R + 0 0 112 -31,-0.2 -31,-0.2 -30,-0.2 -1,-0.1 -0.795 42.3 162.0-102.8 143.5 -12.1 24.2 -7.4 74 94 A E + 0 0 111 -33,-0.6 2,-0.2 -2,-0.4 -32,-0.1 -0.480 28.2 116.2-161.2 79.8 -15.2 23.2 -9.5 75 95 A Q 0 0 123 -34,-0.1 -31,-0.0 -2,-0.1 -1,-0.0 -0.720 360.0 360.0-154.3 96.3 -18.5 24.0 -7.9 76 96 A I 0 0 199 -2,-0.2 -2,-0.0 0, 0.0 0, 0.0 -0.345 360.0 360.0 -92.4 360.0 -20.9 26.4 -9.6