==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-JAN-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN, PLANT PROTEIN 22-AUG-10 2L2M . COMPND 2 MOLECULE: HYPONASTIC LEAVE 1; . SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; . AUTHOR R.M.RASIA,J.L.MATEOS,N.G.BOLOGNA,P.BURDISSO,L.IMBERT,J.F.PAL . 70 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5318.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 50 71.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 16 22.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 8.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 24 34.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 101 A L > 0 0 174 0, 0.0 4,-2.2 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 -44.7 -5.3 6.1 7.1 2 102 A C H > + 0 0 26 1,-0.2 4,-2.5 2,-0.2 5,-0.2 0.900 360.0 50.1 -64.8 -42.3 -3.5 5.8 10.4 3 103 A K H > S+ 0 0 110 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.874 111.6 48.7 -64.3 -38.5 -2.6 9.5 10.4 4 104 A N H > S+ 0 0 95 2,-0.2 4,-2.3 1,-0.2 -2,-0.2 0.899 112.5 47.5 -68.4 -42.1 -6.2 10.5 9.7 5 105 A L H X S+ 0 0 81 -4,-2.2 4,-1.9 2,-0.2 -2,-0.2 0.893 113.1 48.4 -65.7 -41.0 -7.5 8.2 12.4 6 106 A L H X S+ 0 0 2 -4,-2.5 4,-2.4 2,-0.2 -2,-0.2 0.859 111.0 51.3 -67.7 -36.4 -4.9 9.5 14.9 7 107 A Q H X S+ 0 0 76 -4,-1.9 4,-2.3 2,-0.2 -2,-0.2 0.923 108.9 49.7 -65.0 -45.9 -5.8 13.1 14.0 8 108 A E H X S+ 0 0 96 -4,-2.3 4,-2.1 1,-0.2 -2,-0.2 0.865 110.8 51.6 -61.8 -37.2 -9.5 12.5 14.5 9 109 A Y H X S+ 0 0 72 -4,-1.9 4,-1.6 2,-0.2 -2,-0.2 0.950 108.2 50.3 -60.8 -51.5 -8.7 11.0 17.9 10 110 A A H <>S+ 0 0 1 -4,-2.4 5,-3.1 1,-0.2 4,-0.5 0.896 110.7 50.3 -55.2 -43.6 -6.6 14.0 18.9 11 111 A Q H ><5S+ 0 0 119 -4,-2.3 3,-1.1 1,-0.2 -1,-0.2 0.916 109.3 50.1 -61.9 -45.2 -9.4 16.3 17.9 12 112 A K H 3<5S+ 0 0 172 -4,-2.1 -1,-0.2 1,-0.3 -2,-0.2 0.762 114.8 45.5 -64.7 -25.1 -12.0 14.3 19.9 13 113 A M T 3<5S- 0 0 74 -4,-1.6 -1,-0.3 -3,-0.2 -2,-0.2 0.437 111.2-121.3 -97.4 -2.3 -9.6 14.5 22.9 14 114 A N T < 5 + 0 0 153 -3,-1.1 -3,-0.2 -4,-0.5 2,-0.2 0.824 67.4 138.9 63.6 32.0 -8.9 18.2 22.4 15 115 A Y < - 0 0 118 -5,-3.1 -1,-0.2 -6,-0.2 -2,-0.1 -0.593 60.1 -84.4-101.7 166.7 -5.2 17.4 22.0 16 116 A A - 0 0 74 -2,-0.2 25,-0.6 1,-0.1 -1,-0.1 -0.284 59.9 -82.3 -65.4 154.5 -2.6 18.8 19.6 17 117 A I - 0 0 109 1,-0.1 -1,-0.1 23,-0.1 -10,-0.1 -0.178 60.1 -82.4 -56.8 149.3 -2.3 17.3 16.1 18 118 A P - 0 0 32 0, 0.0 2,-0.6 0, 0.0 22,-0.2 -0.283 44.9-142.6 -54.8 133.6 -0.3 14.1 15.8 19 119 A L E -A 39 0A 82 20,-2.0 20,-2.7 -3,-0.1 2,-0.5 -0.901 11.2-160.1-109.1 114.5 3.4 14.9 15.5 20 120 A Y E +A 38 0A 71 -2,-0.6 2,-0.4 18,-0.2 18,-0.2 -0.793 11.7 179.2 -95.1 130.6 5.5 12.7 13.2 21 121 A Q E -A 37 0A 117 16,-2.6 16,-2.6 -2,-0.5 2,-0.3 -0.994 4.5-170.4-134.2 130.0 9.3 12.6 13.6 22 122 A C E -A 36 0A 55 -2,-0.4 2,-0.3 14,-0.2 14,-0.2 -0.832 1.9-172.9-118.2 156.0 11.8 10.6 11.6 23 123 A Q E -A 35 0A 126 12,-2.8 12,-2.5 -2,-0.3 2,-0.5 -0.966 17.8-139.6-151.2 130.8 15.5 9.9 12.1 24 124 A K E -A 34 0A 122 -2,-0.3 2,-0.5 10,-0.2 10,-0.2 -0.786 22.7-162.6 -91.3 130.3 18.2 8.2 10.0 25 125 A V E -A 33 0A 42 8,-3.0 8,-2.5 -2,-0.5 2,-0.4 -0.949 9.0-174.4-120.9 126.9 20.6 6.0 11.9 26 126 A E E -A 32 0A 129 -2,-0.5 6,-0.2 6,-0.2 2,-0.2 -0.950 13.4-145.9-118.6 142.1 24.0 4.7 10.7 27 127 A T > - 0 0 58 4,-1.0 3,-1.7 -2,-0.4 5,-0.0 -0.471 30.1-106.8-100.4 170.6 26.1 2.2 12.6 28 128 A L T 3 S+ 0 0 186 1,-0.3 -1,-0.1 -2,-0.2 -2,-0.0 0.706 122.4 58.8 -67.7 -19.8 29.9 1.8 13.0 29 129 A G T 3 S- 0 0 60 2,-0.1 -1,-0.3 0, 0.0 0, 0.0 0.201 123.6-107.4 -92.0 14.5 29.6 -1.2 10.7 30 130 A R < + 0 0 225 -3,-1.7 2,-0.6 1,-0.2 -2,-0.1 0.914 64.7 157.9 61.6 45.4 28.1 1.1 8.0 31 131 A V - 0 0 78 2,-0.0 -4,-1.0 -4,-0.0 2,-0.5 -0.907 30.5-149.3-104.5 115.7 24.5 -0.3 8.5 32 132 A T E +A 26 0A 68 -2,-0.6 2,-0.3 -6,-0.2 -6,-0.2 -0.715 27.3 158.9 -87.8 125.1 21.8 2.1 7.3 33 133 A Q E -A 25 0A 65 -8,-2.5 -8,-3.0 -2,-0.5 2,-0.4 -0.995 27.3-140.0-145.1 150.4 18.5 2.0 9.1 34 134 A F E -AB 24 50A 40 16,-2.6 16,-2.5 -2,-0.3 2,-0.3 -0.888 14.8-173.5-115.0 139.9 15.5 4.3 9.5 35 135 A T E -A 23 0A 32 -12,-2.5 -12,-2.8 -2,-0.4 2,-0.3 -0.960 2.7-178.0-128.7 150.6 13.4 5.0 12.6 36 136 A C E -A 22 0A 3 -2,-0.3 11,-2.5 20,-0.3 2,-0.3 -0.971 5.6-166.6-142.8 158.1 10.2 7.0 13.2 37 137 A T E -AC 21 46A 19 -16,-2.6 -16,-2.6 -2,-0.3 2,-0.5 -0.998 9.5-150.0-146.7 146.3 7.9 8.0 16.0 38 138 A V E -AC 20 45A 10 7,-2.6 7,-2.5 -2,-0.3 2,-0.6 -0.968 10.6-149.5-121.8 121.3 4.5 9.5 16.3 39 139 A E E -AC 19 44A 54 -20,-2.7 -20,-2.0 -2,-0.5 2,-0.6 -0.784 14.1-172.6 -91.5 119.5 3.5 11.7 19.3 40 140 A I E > S- C 0 43A 3 3,-3.0 3,-1.6 -2,-0.6 -23,-0.1 -0.942 72.1 -21.8-115.9 114.2 -0.2 11.5 20.2 41 141 A G T 3 S- 0 0 32 -25,-0.6 -1,-0.1 -2,-0.6 3,-0.1 0.752 129.8 -49.5 64.1 24.0 -1.6 13.8 22.9 42 142 A G T 3 S+ 0 0 53 1,-0.2 2,-0.6 -26,-0.1 -1,-0.3 0.484 116.9 118.8 90.9 5.2 2.0 14.2 24.2 43 143 A I E < -C 40 0A 93 -3,-1.6 -3,-3.0 2,-0.0 2,-0.4 -0.911 57.7-143.1-108.9 112.4 2.5 10.4 24.2 44 144 A K E -C 39 0A 134 -2,-0.6 2,-0.6 -5,-0.3 -5,-0.3 -0.575 13.6-169.9 -80.9 126.5 5.2 9.2 22.0 45 145 A Y E -C 38 0A 49 -7,-2.5 -7,-2.6 -2,-0.4 2,-0.4 -0.935 11.6-159.1-115.5 108.9 4.8 6.0 20.1 46 146 A T E -C 37 0A 89 -2,-0.6 -9,-0.3 -9,-0.2 2,-0.1 -0.720 5.7-143.4 -96.5 131.6 8.0 4.8 18.5 47 147 A G - 0 0 9 -11,-2.5 13,-0.2 -2,-0.4 2,-0.2 -0.253 30.1 -84.5 -85.0 174.3 8.0 2.4 15.6 48 148 A A - 0 0 61 7,-0.1 2,-0.2 1,-0.1 -12,-0.2 -0.474 47.5 -98.3 -80.2 149.9 10.5 -0.4 14.8 49 149 A A - 0 0 52 -2,-0.2 2,-0.2 -14,-0.1 -14,-0.2 -0.473 49.8-180.0 -66.6 133.0 13.7 0.2 12.9 50 150 A T B -B 34 0A 31 -16,-2.5 -16,-2.6 -2,-0.2 6,-0.0 -0.733 40.9-109.6-129.2 177.4 13.4 -0.7 9.2 51 151 A R S S+ 0 0 221 -2,-0.2 2,-0.3 -18,-0.2 -16,-0.1 0.803 100.2 37.6 -79.0 -30.7 15.6 -0.7 6.1 52 152 A T S > S- 0 0 61 -18,-0.1 4,-1.8 1,-0.1 -18,-0.2 -0.829 77.6-123.8-122.9 159.4 13.7 2.2 4.4 53 153 A K H > S+ 0 0 106 -2,-0.3 4,-2.3 2,-0.2 5,-0.1 0.865 112.2 55.7 -67.2 -37.3 12.1 5.4 5.6 54 154 A K H > S+ 0 0 166 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.883 109.1 46.4 -63.7 -39.8 8.7 4.4 4.2 55 155 A D H > S+ 0 0 84 1,-0.2 4,-1.6 2,-0.2 -1,-0.2 0.869 111.6 51.9 -69.1 -38.1 8.8 1.2 6.2 56 156 A A H X S+ 0 0 0 -4,-1.8 4,-2.2 2,-0.2 -20,-0.3 0.873 108.7 52.2 -63.6 -38.3 9.8 3.1 9.3 57 157 A E H X S+ 0 0 64 -4,-2.3 4,-2.3 2,-0.2 -2,-0.2 0.957 111.2 43.4 -64.6 -53.1 6.9 5.5 8.8 58 158 A I H X S+ 0 0 67 -4,-1.9 4,-2.3 1,-0.2 -1,-0.2 0.789 111.6 57.6 -65.1 -27.8 4.2 2.9 8.5 59 159 A S H X S+ 0 0 21 -4,-1.6 4,-2.2 2,-0.2 -1,-0.2 0.932 108.9 43.4 -65.3 -47.8 5.8 1.1 11.4 60 160 A A H X S+ 0 0 0 -4,-2.2 4,-2.4 2,-0.2 -22,-0.2 0.867 113.8 52.4 -64.9 -37.5 5.4 4.1 13.6 61 161 A G H X S+ 0 0 8 -4,-2.3 4,-2.5 2,-0.2 5,-0.2 0.910 110.0 47.8 -64.9 -43.7 1.9 4.7 12.3 62 162 A R H X S+ 0 0 160 -4,-2.3 4,-2.5 2,-0.2 5,-0.3 0.917 112.7 49.3 -61.9 -44.9 0.9 1.1 13.1 63 163 A T H X S+ 0 0 54 -4,-2.2 4,-2.1 2,-0.2 -2,-0.2 0.938 114.8 43.1 -60.9 -49.8 2.4 1.3 16.6 64 164 A A H X S+ 0 0 0 -4,-2.4 4,-1.9 -19,-0.3 -2,-0.2 0.932 116.3 46.7 -63.9 -48.1 0.6 4.6 17.4 65 165 A L H X S+ 0 0 26 -4,-2.5 4,-2.2 1,-0.2 -2,-0.2 0.928 113.8 47.1 -62.2 -48.0 -2.7 3.6 16.0 66 166 A L H X S+ 0 0 118 -4,-2.5 4,-0.7 -5,-0.2 -1,-0.2 0.882 110.7 52.9 -62.2 -40.0 -2.8 0.2 17.6 67 167 A A H < S+ 0 0 39 -4,-2.1 -1,-0.2 -5,-0.3 -2,-0.2 0.863 112.2 45.1 -64.1 -37.1 -1.8 1.6 21.0 68 168 A I H < S+ 0 0 26 -4,-1.9 -1,-0.2 1,-0.2 -2,-0.2 0.824 117.2 44.4 -73.9 -33.1 -4.7 4.2 20.7 69 169 A Q H < 0 0 129 -4,-2.2 -2,-0.2 -5,-0.2 -1,-0.2 0.431 360.0 360.0 -91.5 -0.9 -7.1 1.5 19.6 70 170 A S < 0 0 136 -4,-0.7 -3,-0.0 -5,-0.2 -4,-0.0 -0.452 360.0 360.0 -69.4 360.0 -5.8 -0.9 22.3