==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-JAN-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN, PLANT PROTEIN 23-AUG-10 2L2N . COMPND 2 MOLECULE: HYPONASTIC LEAVE 1; . SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; . AUTHOR R.M.RASIA,J.L.MATEOS,N.G.BOLOGNA,P.BURDISSO,L.IMBERT,J.F.PAL . 71 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5428.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 49 69.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 21.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 11.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 2.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 23 32.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 16 A F > 0 0 23 0, 0.0 5,-1.6 0, 0.0 6,-0.2 0.000 360.0 360.0 360.0 -16.1 0.0 0.0 0.0 2 17 A K T 5 + 0 0 147 3,-0.2 2,-0.5 4,-0.1 3,-0.2 -0.310 360.0 19.5 -63.2 135.0 2.2 0.9 3.0 3 18 A S T >5S+ 0 0 79 1,-0.2 4,-2.1 2,-0.0 5,-0.2 -0.947 130.7 5.0 111.9-125.1 0.6 3.1 5.5 4 19 A R H >5S+ 0 0 178 -2,-0.5 4,-2.3 1,-0.2 -1,-0.2 0.923 133.0 49.0 -65.2 -46.5 -3.2 3.5 5.6 5 20 A L H >5S+ 0 0 26 -3,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.852 110.6 52.2 -65.2 -35.7 -4.0 0.8 3.0 6 21 A Q H >S+ 0 0 2 -4,-2.4 5,-3.0 1,-0.2 -2,-0.2 0.881 110.7 51.2 -56.5 -40.1 -5.7 -4.8 4.8 10 25 A Q H ><5S+ 0 0 123 -4,-1.9 3,-1.4 1,-0.2 -1,-0.2 0.921 110.9 46.7 -63.3 -45.6 -4.7 -5.9 8.3 11 26 A K H 3<5S+ 0 0 155 -4,-2.2 -1,-0.2 1,-0.3 -2,-0.2 0.775 111.2 53.4 -66.6 -26.7 -8.0 -4.8 9.8 12 27 A Y T 3<5S- 0 0 120 -4,-2.0 -1,-0.3 -5,-0.2 -2,-0.2 0.385 111.0-124.5 -87.4 3.0 -9.7 -6.6 6.9 13 28 A K T < 5 + 0 0 192 -3,-1.4 -3,-0.2 1,-0.2 -2,-0.1 0.850 59.5 153.2 53.8 36.2 -7.8 -9.8 7.7 14 29 A L < - 0 0 50 -5,-3.0 -1,-0.2 -6,-0.2 -2,-0.1 -0.669 53.2 -90.4 -95.1 151.6 -6.5 -9.8 4.1 15 30 A P - 0 0 79 0, 0.0 24,-0.2 0, 0.0 -1,-0.1 -0.289 59.0 -84.3 -57.9 140.2 -3.2 -11.3 3.0 16 31 A T - 0 0 111 1,-0.1 23,-0.1 22,-0.1 21,-0.1 -0.238 55.5-106.7 -50.7 121.2 -0.3 -8.9 3.1 17 32 A P - 0 0 8 0, 0.0 2,-0.6 0, 0.0 21,-0.2 -0.192 29.7-131.5 -55.0 137.9 -0.4 -6.9 -0.2 18 33 A V E -A 37 0A 75 19,-2.8 19,-2.6 -3,-0.1 2,-0.6 -0.841 15.7-154.5 -97.8 121.1 2.3 -7.9 -2.7 19 34 A Y E -A 36 0A 62 -2,-0.6 2,-0.4 17,-0.2 17,-0.2 -0.841 14.0-179.1 -97.1 121.3 4.3 -5.1 -4.2 20 35 A E E -A 35 0A 94 15,-2.7 15,-2.8 -2,-0.6 2,-0.5 -0.951 11.3-154.6-118.0 142.4 5.8 -5.6 -7.7 21 36 A I E -A 34 0A 76 -2,-0.4 2,-0.5 13,-0.2 13,-0.2 -0.961 5.6-167.4-120.2 127.0 7.9 -3.1 -9.6 22 37 A V E -A 33 0A 49 11,-3.1 11,-2.2 -2,-0.5 2,-0.5 -0.953 3.1-173.6-116.3 123.2 8.3 -3.1 -13.4 23 38 A K E +A 32 0A 134 -2,-0.5 2,-0.3 9,-0.2 9,-0.2 -0.964 15.4 159.9-118.9 123.2 11.0 -1.0 -15.1 24 39 A E E +A 31 0A 128 7,-2.1 7,-3.0 -2,-0.5 -2,-0.0 -0.839 27.0 48.8-134.6 168.7 11.1 -0.8 -18.9 25 40 A G S S- 0 0 59 -2,-0.3 5,-0.2 5,-0.2 -2,-0.0 -0.242 90.7 -23.8 94.2 178.4 12.4 1.4 -21.7 26 41 A P - 0 0 81 0, 0.0 -2,-0.1 0, 0.0 5,-0.0 -0.077 59.7-115.1 -58.6 161.9 15.9 2.9 -22.4 27 42 A S S S+ 0 0 102 1,-0.2 3,-0.2 2,-0.2 -2,-0.0 0.690 119.9 40.3 -72.1 -18.6 18.3 3.5 -19.5 28 43 A H S S+ 0 0 176 1,-0.2 -1,-0.2 0, 0.0 -3,-0.0 0.541 126.2 34.5-106.2 -13.1 18.1 7.2 -20.2 29 44 A K S S+ 0 0 155 2,-0.0 -1,-0.2 0, 0.0 -2,-0.2 -0.389 84.9 161.1-135.0 58.3 14.3 7.2 -20.8 30 45 A S - 0 0 17 -3,-0.2 2,-0.4 -5,-0.2 -5,-0.2 -0.429 26.1-148.3 -84.7 153.4 13.0 4.6 -18.5 31 46 A L E -A 24 0A 72 -7,-3.0 -7,-2.1 -2,-0.1 2,-0.4 -0.970 7.3-147.1-121.9 139.6 9.4 4.1 -17.3 32 47 A F E -AB 23 49A 29 17,-2.4 17,-0.6 -2,-0.4 2,-0.4 -0.835 12.5-175.4-106.1 140.7 8.3 2.8 -13.9 33 48 A Q E -A 22 0A 68 -11,-2.2 -11,-3.1 -2,-0.4 2,-0.5 -0.991 8.3-157.5-135.8 130.0 5.1 0.8 -13.2 34 49 A S E -A 21 0A 0 -2,-0.4 11,-2.3 21,-0.3 2,-0.5 -0.892 4.5-167.6-110.3 131.9 3.9 -0.4 -9.8 35 50 A T E -AC 20 44A 9 -15,-2.8 -15,-2.7 -2,-0.5 2,-0.6 -0.968 1.4-168.1-120.7 120.2 1.6 -3.3 -9.2 36 51 A V E -AC 19 43A 3 7,-2.6 7,-2.4 -2,-0.5 2,-0.6 -0.925 6.5-165.0-107.4 116.8 -0.1 -3.9 -5.8 37 52 A I E +AC 18 42A 36 -19,-2.6 -19,-2.8 -2,-0.6 2,-0.4 -0.890 11.8 172.8-105.9 119.5 -1.8 -7.3 -5.5 38 53 A L E > - C 0 41A 26 3,-2.9 3,-2.1 -2,-0.6 -22,-0.1 -0.965 68.7 -22.1-131.2 116.7 -4.3 -7.8 -2.6 39 54 A D T 3 S- 0 0 98 -2,-0.4 -1,-0.1 1,-0.3 3,-0.1 0.876 126.4 -50.7 55.2 40.9 -6.5 -10.8 -2.1 40 55 A G T 3 S+ 0 0 72 1,-0.2 2,-0.5 0, 0.0 -1,-0.3 0.246 114.7 121.0 85.6 -13.9 -6.2 -11.7 -5.8 41 56 A V E < -C 38 0A 71 -3,-2.1 -3,-2.9 2,-0.0 2,-0.4 -0.745 53.7-147.8 -90.4 123.4 -7.2 -8.2 -6.7 42 57 A R E -C 37 0A 157 -2,-0.5 2,-0.6 -5,-0.2 -5,-0.2 -0.761 10.9-166.8 -99.2 130.5 -4.6 -6.4 -8.9 43 58 A Y E -C 36 0A 34 -7,-2.4 -7,-2.6 -2,-0.4 2,-0.4 -0.913 9.6-167.5-116.9 105.0 -4.0 -2.6 -8.7 44 59 A N E -C 35 0A 70 -2,-0.6 -9,-0.2 -9,-0.2 -2,-0.0 -0.745 14.7-132.6 -93.9 135.7 -1.9 -1.3 -11.6 45 60 A S - 0 0 7 -11,-2.3 10,-0.1 -2,-0.4 11,-0.1 -0.165 34.3 -85.0 -73.4 173.9 -0.4 2.2 -11.5 46 61 A L - 0 0 103 9,-0.2 3,-0.2 1,-0.1 -12,-0.2 -0.538 43.8-118.7 -80.2 149.3 -0.6 4.7 -14.3 47 62 A P S S+ 0 0 107 0, 0.0 -14,-0.1 0, 0.0 -1,-0.1 -0.376 83.5 59.9 -81.4 163.4 2.0 4.7 -17.1 48 63 A G + 0 0 44 1,-0.3 2,-0.4 -16,-0.1 -15,-0.1 0.741 66.5 141.7 93.2 26.7 4.5 7.5 -17.9 49 64 A F B -B 32 0A 52 -17,-0.6 -17,-2.4 -3,-0.2 -1,-0.3 -0.831 36.1-167.4-100.8 139.2 6.3 7.8 -14.6 50 65 A F S S+ 0 0 143 -2,-0.4 2,-0.3 -19,-0.2 -20,-0.1 0.007 70.8 62.1-110.5 25.9 10.0 8.4 -14.5 51 66 A N S > S- 0 0 84 -19,-0.1 4,-2.1 1,-0.1 5,-0.2 -0.975 70.4-139.0-154.7 136.1 10.4 7.6 -10.8 52 67 A R H > S+ 0 0 115 -2,-0.3 4,-2.2 1,-0.2 5,-0.1 0.882 108.0 50.7 -62.0 -40.0 9.8 4.5 -8.6 53 68 A K H > S+ 0 0 133 2,-0.2 4,-2.5 1,-0.2 -1,-0.2 0.901 108.3 52.2 -64.7 -42.3 8.2 6.6 -5.9 54 69 A A H > S+ 0 0 28 1,-0.2 4,-2.0 2,-0.2 -2,-0.2 0.919 111.7 45.8 -60.3 -45.8 5.9 8.3 -8.3 55 70 A A H X S+ 0 0 0 -4,-2.1 4,-2.3 2,-0.2 -21,-0.3 0.894 111.5 52.8 -64.2 -41.2 4.7 4.9 -9.7 56 71 A E H X S+ 0 0 48 -4,-2.2 4,-2.2 2,-0.2 -2,-0.2 0.918 108.9 48.7 -61.8 -45.6 4.3 3.5 -6.2 57 72 A Q H X S+ 0 0 145 -4,-2.5 4,-2.5 1,-0.2 -1,-0.2 0.902 109.8 52.6 -61.2 -42.9 2.1 6.4 -5.0 58 73 A S H X S+ 0 0 16 -4,-2.0 4,-2.2 2,-0.2 -1,-0.2 0.917 108.0 51.3 -57.9 -45.5 -0.0 6.0 -8.2 59 74 A A H X S+ 0 0 0 -4,-2.3 4,-2.1 1,-0.2 -2,-0.2 0.915 110.2 49.0 -57.7 -45.3 -0.5 2.3 -7.4 60 75 A A H X S+ 0 0 26 -4,-2.2 4,-2.4 1,-0.2 -1,-0.2 0.894 108.5 53.7 -61.6 -41.5 -1.6 3.2 -3.8 61 76 A E H X S+ 0 0 76 -4,-2.5 4,-2.6 1,-0.2 -1,-0.2 0.896 107.6 50.8 -60.6 -42.0 -4.0 5.8 -5.2 62 77 A V H X S+ 0 0 37 -4,-2.2 4,-2.4 2,-0.2 -1,-0.2 0.922 111.0 48.1 -61.0 -46.1 -5.6 3.2 -7.4 63 78 A A H X S+ 0 0 8 -4,-2.1 4,-1.5 1,-0.2 -2,-0.2 0.889 113.4 48.1 -61.2 -40.7 -6.0 0.8 -4.5 64 79 A L H X S+ 0 0 74 -4,-2.4 4,-2.1 2,-0.2 -2,-0.2 0.899 111.6 48.8 -69.3 -42.0 -7.5 3.5 -2.3 65 80 A R H X S+ 0 0 147 -4,-2.6 4,-1.8 1,-0.2 -2,-0.2 0.904 112.0 48.5 -64.1 -42.9 -9.9 4.7 -5.0 66 81 A E H X S+ 0 0 71 -4,-2.4 4,-1.7 1,-0.2 -1,-0.2 0.798 109.6 54.3 -68.0 -29.2 -11.1 1.1 -5.7 67 82 A L H X S+ 0 0 35 -4,-1.5 4,-1.6 2,-0.2 -2,-0.2 0.899 107.2 49.5 -68.0 -42.9 -11.5 0.7 -1.9 68 83 A A H < S+ 0 0 69 -4,-2.1 -2,-0.2 1,-0.2 -1,-0.2 0.843 110.1 52.4 -63.9 -34.6 -13.8 3.8 -1.8 69 84 A K H < S+ 0 0 155 -4,-1.8 -1,-0.2 1,-0.2 -2,-0.2 0.891 113.4 42.4 -66.6 -41.1 -15.8 2.3 -4.7 70 85 A S H < 0 0 93 -4,-1.7 -2,-0.2 -5,-0.1 -1,-0.2 0.691 360.0 360.0 -79.6 -19.8 -16.2 -1.0 -2.8 71 86 A S < 0 0 132 -4,-1.6 -3,-0.0 -5,-0.1 -4,-0.0 -0.370 360.0 360.0 -61.5 360.0 -16.9 0.9 0.4