==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-JAN-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE/RNA 12-SEP-10 2L3C . COMPND 2 MOLECULE: DOUBLE-STRANDED RNA-SPECIFIC EDITASE 1; . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR F.ALLAIN,R.STEFL,F.OBERSTRASS . 74 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5130.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 47 63.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 18 24.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 4.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 5.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 23 31.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A P 0 0 184 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 175.9 -12.9 6.9 -14.2 2 2 A G + 0 0 56 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.099 360.0 49.7 178.0 -64.8 -13.2 6.7 -10.4 3 3 A P S S- 0 0 125 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.464 92.8-157.7 -75.0 -2.4 -12.4 3.3 -8.8 4 4 A V - 0 0 95 1,-0.2 3,-0.0 2,-0.1 0, 0.0 0.255 16.0-118.1 45.8-173.3 -9.1 3.3 -10.8 5 5 A L > + 0 0 129 1,-0.0 3,-1.9 2,-0.0 4,-0.4 -0.253 43.8 155.2-154.5 54.5 -7.1 0.2 -11.7 6 6 A P T 3> + 0 0 34 0, 0.0 4,-2.1 0, 0.0 3,-0.4 0.727 64.9 82.7 -62.3 -21.2 -3.6 0.4 -10.2 7 7 A K H 3> S+ 0 0 134 1,-0.3 4,-2.5 2,-0.2 5,-0.2 0.844 86.4 59.7 -49.3 -35.8 -3.4 -3.4 -10.3 8 8 A N H <> S+ 0 0 95 -3,-1.9 4,-3.0 2,-0.2 -1,-0.3 0.949 103.7 47.7 -55.5 -54.8 -2.4 -2.8 -13.9 9 9 A A H > S+ 0 0 2 -4,-0.4 4,-2.4 -3,-0.4 5,-0.2 0.922 112.7 49.5 -55.4 -48.3 0.7 -0.7 -12.8 10 10 A L H X S+ 0 0 55 -4,-2.1 4,-2.3 1,-0.2 -2,-0.2 0.974 116.0 40.2 -56.5 -60.1 1.7 -3.4 -10.3 11 11 A M H X S+ 0 0 104 -4,-2.5 4,-2.8 1,-0.2 -1,-0.2 0.880 112.4 56.6 -55.9 -44.0 1.5 -6.3 -12.7 12 12 A Q H X S+ 0 0 56 -4,-3.0 4,-2.4 -5,-0.2 5,-0.2 0.938 109.2 46.0 -55.8 -50.4 3.0 -4.3 -15.5 13 13 A L H X S+ 0 0 8 -4,-2.4 4,-2.3 1,-0.2 -1,-0.2 0.928 110.9 53.0 -55.7 -48.4 6.1 -3.6 -13.4 14 14 A N H < S+ 0 0 110 -4,-2.3 -2,-0.2 -5,-0.2 -1,-0.2 0.906 108.9 51.7 -55.2 -43.3 6.3 -7.3 -12.4 15 15 A E H < S+ 0 0 139 -4,-2.8 -2,-0.2 1,-0.2 -1,-0.2 0.974 116.5 36.7 -55.7 -61.9 6.2 -8.2 -16.0 16 16 A I H < S+ 0 0 39 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.740 126.5 43.0 -61.1 -24.2 9.0 -6.0 -17.1 17 17 A K < + 0 0 21 -4,-2.3 -1,-0.2 -5,-0.2 -2,-0.1 -0.546 54.6 172.2-133.0 65.7 10.9 -6.7 -13.8 18 18 A P S S+ 0 0 115 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 0.539 84.6 19.8 -48.5 -9.2 10.9 -10.3 -12.6 19 19 A G S S+ 0 0 58 -3,-0.1 2,-0.2 -5,-0.0 -5,-0.0 -0.804 78.6 119.7-167.9 125.1 13.3 -9.1 -9.9 20 20 A L - 0 0 57 -2,-0.2 2,-0.4 -3,-0.1 22,-0.2 -0.872 49.7 -93.2-163.6-171.6 14.1 -5.6 -8.4 21 21 A Q E -A 41 0A 119 20,-2.1 20,-3.2 -2,-0.2 2,-0.4 -0.982 17.1-161.1-131.9 135.4 14.1 -3.8 -5.1 22 22 A Y E +A 40 0A 81 -2,-0.4 2,-0.3 18,-0.2 18,-0.2 -0.929 18.2 178.0-106.8 132.6 11.5 -1.5 -3.4 23 23 A M E -A 39 0A 73 16,-2.4 16,-3.3 -2,-0.4 2,-0.4 -0.977 21.3-127.5-135.1 146.1 12.8 0.8 -0.6 24 24 A L E +A 38 0A 67 -2,-0.3 14,-0.2 14,-0.2 2,-0.2 -0.807 22.0 179.3-104.5 135.9 11.1 3.4 1.6 25 25 A L E +A 37 0A 74 12,-3.0 12,-1.8 -2,-0.4 0, 0.0 -0.600 59.2 6.4-116.3-178.6 12.0 7.0 2.2 26 26 A S E +A 36 0A 65 -2,-0.2 10,-0.2 10,-0.2 -2,-0.0 -0.125 58.3 160.6 32.4-133.7 10.3 9.7 4.3 27 27 A Q E + 0 0 81 8,-2.4 2,-0.3 1,-0.3 9,-0.2 0.910 33.5 110.9 76.0 87.0 7.4 8.2 6.3 28 28 A T E +A 35 0A 93 7,-0.7 7,-2.4 5,-0.1 -1,-0.3 -0.901 30.2 144.0-166.1 167.8 6.7 10.6 9.1 29 29 A G - 0 0 46 -2,-0.3 0, 0.0 5,-0.2 0, 0.0 -0.978 60.6 -69.8 169.9-175.2 3.8 13.0 9.9 30 30 A P S S- 0 0 100 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 0.961 86.0 -83.7 -67.5 -55.0 1.6 14.6 12.5 31 31 A V S S+ 0 0 128 -3,-0.1 -2,-0.0 0, 0.0 0, 0.0 0.075 120.2 36.1 177.4 -27.4 -0.2 11.4 13.4 32 32 A H S S+ 0 0 161 1,-0.2 -3,-0.0 0, 0.0 0, 0.0 0.292 110.3 56.6-129.0 4.7 -3.0 10.9 10.9 33 33 A A S S+ 0 0 58 2,-0.0 2,-0.3 19,-0.0 -1,-0.2 -0.590 70.4 178.5-135.0 76.2 -1.5 12.3 7.7 34 34 A P - 0 0 38 0, 0.0 19,-1.0 0, 0.0 2,-0.6 -0.576 19.7-145.1 -78.9 135.5 1.7 10.2 7.1 35 35 A L E -AB 28 52A 67 -7,-2.4 -8,-2.4 -2,-0.3 -7,-0.7 -0.925 18.8-174.6-105.2 118.1 3.8 10.9 4.0 36 36 A F E -AB 26 51A 22 15,-2.5 15,-2.5 -2,-0.6 2,-0.5 -0.891 9.1-170.2-109.3 135.5 5.5 7.8 2.5 37 37 A V E -AB 25 50A 11 -12,-1.8 -12,-3.0 -2,-0.4 2,-0.4 -0.880 7.8-173.4-130.5 104.9 7.9 8.0 -0.4 38 38 A M E -AB 24 49A 27 11,-1.7 11,-2.2 -2,-0.5 2,-0.4 -0.793 4.8-162.7-101.9 135.2 8.7 4.6 -1.8 39 39 A S E -AB 23 48A 3 -16,-3.3 -16,-2.4 -2,-0.4 2,-0.4 -0.961 7.0-145.7-123.9 135.4 11.4 4.3 -4.4 40 40 A V E -AB 22 47A 0 7,-2.6 7,-2.1 -2,-0.4 2,-0.6 -0.843 6.5-150.3-105.1 135.1 12.0 1.4 -6.8 41 41 A E E +AB 21 46A 67 -20,-3.2 -20,-2.1 -2,-0.4 2,-0.4 -0.928 24.3 162.9-109.6 117.6 15.4 0.4 -7.9 42 42 A V E > S- B 0 45A 4 3,-2.9 3,-3.2 -2,-0.6 -22,-0.1 -0.999 70.3 -18.0-135.5 128.4 15.7 -1.3 -11.3 43 43 A N T 3 S- 0 0 75 -2,-0.4 3,-0.1 1,-0.3 31,-0.1 0.670 127.3 -54.1 51.3 20.1 18.9 -1.7 -13.5 44 44 A G T 3 S+ 0 0 65 1,-0.4 2,-0.4 0, 0.0 -1,-0.3 0.435 115.9 113.9 94.2 1.6 20.5 1.0 -11.3 45 45 A Q E < -B 42 0A 60 -3,-3.2 -3,-2.9 20,-0.0 2,-0.4 -0.897 49.2-162.7-104.4 135.0 17.8 3.6 -11.9 46 46 A V E -B 41 0A 69 -2,-0.4 2,-0.4 -5,-0.2 -5,-0.2 -0.978 5.0-169.8-125.9 128.1 15.7 4.5 -8.9 47 47 A F E -B 40 0A 61 -7,-2.1 -7,-2.6 -2,-0.4 2,-0.4 -0.965 9.0-151.4-124.9 135.2 12.3 6.2 -9.1 48 48 A E E -B 39 0A 94 -2,-0.4 2,-0.4 -9,-0.3 -9,-0.2 -0.852 9.6-172.1-116.0 136.0 10.5 7.7 -6.1 49 49 A G E -B 38 0A 0 -11,-2.2 -11,-1.7 -2,-0.4 2,-0.5 -0.994 13.1-145.1-133.5 135.1 6.7 8.2 -5.5 50 50 A S E +B 37 0A 67 -2,-0.4 -13,-0.2 -13,-0.2 -24,-0.0 -0.873 28.7 157.7-106.3 123.6 4.9 10.0 -2.7 51 51 A G E -B 36 0A 0 -15,-2.5 -15,-2.5 -2,-0.5 2,-0.4 -0.954 46.7-107.7-136.0 154.7 1.7 8.7 -1.3 52 52 A P E > S-B 35 0A 76 0, 0.0 4,-0.5 0, 0.0 5,-0.2 -0.719 97.9 -1.7 -75.0 135.6 -0.4 9.0 1.9 53 53 A T H > S- 0 0 74 -19,-1.0 4,-0.6 -2,-0.4 -17,-0.3 0.076 108.6 -68.7 62.8 175.0 -0.0 5.6 3.6 54 54 A K H > S+ 0 0 137 2,-0.1 4,-1.2 1,-0.1 5,-0.3 0.743 116.7 75.0 -74.0 -22.8 2.0 2.8 1.9 55 55 A K H > S+ 0 0 138 1,-0.2 4,-1.6 -3,-0.2 3,-0.2 0.967 99.1 32.1 -55.7 -78.7 -0.4 2.1 -1.0 56 56 A K H X S+ 0 0 119 -4,-0.5 4,-3.1 1,-0.2 5,-0.3 0.758 110.5 67.9 -55.5 -32.5 -0.0 5.0 -3.6 57 57 A A H X S+ 0 0 0 -4,-0.6 4,-2.3 1,-0.2 -1,-0.2 0.974 107.7 33.4 -55.1 -67.7 3.7 5.5 -2.8 58 58 A K H X S+ 0 0 74 -4,-1.2 4,-2.4 -3,-0.2 -1,-0.2 0.863 118.9 57.9 -55.9 -38.3 5.1 2.2 -4.2 59 59 A L H X S+ 0 0 23 -4,-1.6 4,-2.1 -5,-0.3 -2,-0.2 0.969 107.4 43.0 -55.5 -61.7 2.3 2.3 -6.9 60 60 A H H X S+ 0 0 79 -4,-3.1 4,-2.5 1,-0.2 -1,-0.2 0.881 112.0 55.9 -55.6 -41.5 3.3 5.7 -8.3 61 61 A A H X S+ 0 0 0 -4,-2.3 4,-2.9 -5,-0.3 5,-0.2 0.922 105.9 51.6 -55.8 -45.3 6.9 4.7 -8.2 62 62 A A H X S+ 0 0 0 -4,-2.4 4,-2.6 -3,-0.2 -2,-0.2 0.925 109.0 50.1 -55.4 -49.1 6.0 1.6 -10.3 63 63 A E H X S+ 0 0 55 -4,-2.1 4,-2.1 2,-0.2 5,-0.2 0.939 114.5 44.1 -55.3 -52.9 4.3 3.8 -12.9 64 64 A K H X S+ 0 0 79 -4,-2.5 4,-2.9 1,-0.2 -2,-0.2 0.967 114.1 47.7 -55.6 -60.4 7.3 6.1 -13.1 65 65 A A H X S+ 0 0 1 -4,-2.9 4,-1.8 1,-0.2 5,-0.5 0.840 109.6 56.5 -55.3 -38.0 10.0 3.4 -13.2 66 66 A L H X S+ 0 0 21 -4,-2.6 4,-1.9 -5,-0.2 -1,-0.2 0.992 112.3 38.0 -55.0 -68.0 7.9 1.5 -15.9 67 67 A R H < S+ 0 0 141 -4,-2.1 -2,-0.2 2,-0.2 -1,-0.2 0.878 124.2 47.5 -55.6 -38.1 7.8 4.4 -18.4 68 68 A S H >< S+ 0 0 26 -4,-2.9 3,-2.1 -5,-0.2 -2,-0.2 0.991 114.7 33.6 -62.8 -85.2 11.4 5.2 -17.4 69 69 A F H >< S+ 0 0 1 -4,-1.8 3,-3.0 1,-0.3 -3,-0.2 0.618 94.9 84.7 -61.4 -15.7 13.5 2.1 -17.4 70 70 A V T 3< S+ 0 0 65 -4,-1.9 -1,-0.3 -5,-0.5 -2,-0.1 0.725 87.6 60.7 -55.4 -15.7 11.7 0.4 -20.3 71 71 A Q T < S+ 0 0 136 -3,-2.1 -1,-0.3 1,-0.2 -2,-0.2 0.583 119.1 25.3 -82.1 -12.9 14.1 2.6 -22.3 72 72 A F < + 0 0 116 -3,-3.0 -1,-0.2 -4,-0.1 -2,-0.2 -0.433 66.0 154.6-150.1 64.6 17.0 0.6 -20.6 73 73 A P 0 0 81 0, 0.0 -30,-0.1 0, 0.0 -3,-0.1 0.438 360.0 360.0 -73.7 0.0 15.8 -2.8 -19.5 74 74 A N 0 0 196 -5,-0.1 -2,-0.1 -31,-0.1 -3,-0.0 0.286 360.0 360.0-148.0 360.0 19.4 -4.0 -19.8