==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-JUN-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 07-OCT-10 2L4J . COMPND 2 MOLECULE: YES-ASSOCIATED PROTEIN 2 (YAP2); . SOURCE 2 ORGANISM_SCIENTIFIC: ORYZIAS LATIPES; . AUTHOR C.WEBB,A.UPADHYAY,M.FURUTANI-SEIKI,S.BAGBY . 46 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3863.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 19 41.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 9 19.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 6.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 10.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 177 A G > > 0 0 47 0, 0.0 3,-2.9 0, 0.0 5,-1.3 0.000 360.0 360.0 360.0 27.2 28.1 20.9 -23.4 2 178 A S T 3 5 + 0 0 104 1,-0.3 0, 0.0 3,-0.2 0, 0.0 0.804 360.0 59.0 -28.6 -61.0 26.2 17.7 -24.2 3 179 A P T 3 5S- 0 0 108 0, 0.0 -1,-0.3 0, 0.0 0, 0.0 0.825 140.3 -68.4 -45.1 -36.5 29.5 15.9 -25.3 4 180 A N T < 5S+ 0 0 109 -3,-2.9 5,-0.3 0, 0.0 -2,-0.2 0.119 111.5 102.2 171.6 -35.9 30.9 16.5 -21.9 5 181 A S T 5S+ 0 0 91 1,-0.2 3,-0.3 2,-0.2 4,-0.3 0.817 100.6 28.4 -39.5 -41.8 31.5 20.3 -21.4 6 182 A S S >> - 0 0 56 0, 0.0 3,-1.6 0, 0.0 29,-0.0 -0.243 42.1 -78.2 -60.4 146.8 27.8 10.9 -9.8 14 190 A E T 3 S+ 0 0 195 1,-0.3 16,-0.0 16,-0.1 3,-0.0 -0.241 124.6 38.8 -49.1 115.8 25.9 7.8 -8.6 15 191 A G T 3 S+ 0 0 11 -3,-0.1 17,-0.6 14,-0.1 -1,-0.3 0.368 107.8 66.7 118.9 1.8 25.1 8.6 -5.0 16 192 A W < + 0 0 50 -3,-1.6 2,-0.4 14,-0.2 14,-0.2 -0.594 56.7 162.8-154.4 85.4 24.3 12.3 -5.4 17 193 A E E -A 29 0A 114 12,-1.8 12,-2.5 -2,-0.1 2,-0.3 -0.906 31.1-132.3-111.0 133.5 21.2 13.2 -7.4 18 194 A Q E +A 28 0A 78 -2,-0.4 2,-0.3 10,-0.2 10,-0.2 -0.592 43.7 131.6 -83.6 142.5 19.7 16.7 -7.3 19 195 A A E -A 27 0A 27 8,-2.3 8,-2.5 -2,-0.3 2,-0.4 -0.910 48.6 -90.2-165.9-170.0 15.9 17.0 -6.9 20 196 A I E -A 26 0A 106 -2,-0.3 6,-0.2 6,-0.2 5,-0.1 -0.946 30.3-123.8-124.4 144.8 13.1 18.7 -4.9 21 197 A T > - 0 0 26 4,-2.8 3,-2.9 -2,-0.4 4,-0.0 -0.421 37.3-101.0 -79.4 158.9 11.3 17.7 -1.7 22 198 A P T 3 S+ 0 0 142 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.846 126.3 61.3 -46.8 -35.8 7.5 17.3 -1.6 23 199 A E T 3 S- 0 0 166 2,-0.1 3,-0.1 1,-0.1 -3,-0.0 0.783 119.7-114.5 -63.4 -26.6 7.5 20.8 0.0 24 200 A G S < S+ 0 0 51 -3,-2.9 2,-0.2 1,-0.4 -1,-0.1 0.264 70.4 137.9 108.6 -8.6 9.1 22.1 -3.2 25 201 A E - 0 0 91 -5,-0.1 -4,-2.8 1,-0.1 -1,-0.4 -0.477 55.6-119.8 -71.7 138.0 12.4 23.1 -1.5 26 202 A I E +A 20 0A 104 -6,-0.2 2,-0.3 -2,-0.2 -6,-0.2 -0.634 47.7 146.7 -83.1 134.4 15.5 22.2 -3.6 27 203 A Y E -A 19 0A 31 -8,-2.5 -8,-2.3 -2,-0.3 2,-0.3 -0.963 44.1-101.5-156.8 170.5 18.0 19.8 -2.1 28 204 A Y E -AB 18 37A 39 9,-1.3 9,-1.4 -2,-0.3 2,-0.5 -0.792 27.5-142.8-103.2 143.8 20.5 17.0 -2.9 29 205 A I E -AB 17 36A 32 -12,-2.5 -12,-1.8 -2,-0.3 2,-0.8 -0.920 2.2-153.5-111.0 127.2 19.8 13.2 -2.3 30 206 A N E > > + B 0 35A 13 5,-2.3 5,-2.0 -2,-0.5 3,-0.6 -0.836 13.8 178.1 -99.7 102.9 22.4 10.8 -1.1 31 207 A H T 3 5 + 0 0 80 -2,-0.8 -1,-0.1 1,-0.2 -15,-0.1 0.517 68.2 85.4 -80.8 -4.1 21.5 7.3 -2.3 32 208 A K T 3 5S- 0 0 142 -17,-0.6 -1,-0.2 1,-0.2 -16,-0.1 0.905 120.1 -2.8 -62.4 -41.5 24.7 6.0 -0.7 33 209 A N T < 5S- 0 0 95 -3,-0.6 -1,-0.2 -18,-0.1 -2,-0.2 0.090 104.0-104.2-137.4 20.6 22.9 5.6 2.6 34 210 A K T 5S+ 0 0 168 -4,-0.5 2,-0.3 1,-0.2 -3,-0.2 0.973 73.2 140.7 51.5 65.7 19.5 7.0 1.8 35 211 A T E < -B 30 0A 54 -5,-2.0 -5,-2.3 2,-0.0 2,-0.4 -0.955 48.4-128.5-137.0 155.7 19.9 10.4 3.6 36 212 A T E +B 29 0A 90 -2,-0.3 2,-0.3 -7,-0.2 -7,-0.2 -0.883 29.7 171.3-107.6 134.6 19.0 14.0 2.9 37 213 A S E -B 28 0A 22 -9,-1.4 -9,-1.3 -2,-0.4 -2,-0.0 -0.990 31.5-157.3-142.2 149.3 21.6 16.8 3.1 38 214 A W + 0 0 150 -2,-0.3 -1,-0.1 -11,-0.2 -9,-0.1 0.410 52.7 130.6-103.0 -1.8 21.6 20.5 2.2 39 215 A L S S- 0 0 91 -11,-0.1 -11,-0.1 1,-0.1 -2,-0.1 -0.096 73.4 -75.9 -52.1 151.7 25.4 20.6 1.8 40 216 A D - 0 0 96 3,-0.1 -1,-0.1 2,-0.1 5,-0.0 0.091 68.4 -74.1 -44.1 161.9 26.7 22.3 -1.4 41 217 A P - 0 0 47 0, 0.0 4,-0.2 0, 0.0 -29,-0.1 0.179 54.6 -90.3 -50.9 179.8 26.4 20.2 -4.7 42 218 A R S S+ 0 0 116 -31,-0.2 3,-0.2 -26,-0.1 -30,-0.1 0.979 124.0 22.5 -61.4 -60.4 28.8 17.3 -5.4 43 219 A L S S+ 0 0 66 -32,-0.3 2,-0.8 1,-0.2 3,-0.5 0.913 79.5 143.5 -75.0 -44.7 31.5 19.3 -7.2 44 220 A E - 0 0 89 1,-0.2 -1,-0.2 2,-0.1 -2,-0.1 -0.159 69.3-100.4 44.2 -88.7 30.7 22.7 -5.7 45 221 A T 0 0 94 -2,-0.8 -1,-0.2 -3,-0.2 -2,-0.1 0.368 360.0 360.0 137.0 76.7 34.4 23.7 -5.5 46 222 A R 0 0 243 -3,-0.5 -2,-0.1 0, 0.0 -3,-0.0 0.400 360.0 360.0 -61.3 360.0 35.9 23.4 -2.0