==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-APR-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 08-OCT-10 2L4M . COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR K.KIM,B.I.KHAYRUTDINOV,Y.H.JEON,K.K.KIM . 69 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5303.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 45 65.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 10.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 7.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 27 39.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 98 A S 0 0 173 0, 0.0 4,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 146.0 -0.2 -6.8 -5.6 2 99 A H + 0 0 183 2,-0.1 2,-0.1 0, 0.0 0, 0.0 0.602 360.0 78.6 -96.9 -14.5 -0.6 -4.3 -2.7 3 100 A M S S- 0 0 153 1,-0.1 0, 0.0 2,-0.0 0, 0.0 -0.448 93.8 -78.0 -90.7 165.2 -3.8 -2.5 -4.0 4 101 A A - 0 0 95 -2,-0.1 -1,-0.1 1,-0.1 -2,-0.1 -0.251 36.6-134.0 -63.3 150.1 -7.5 -3.6 -3.9 5 102 A S + 0 0 112 -4,-0.1 -1,-0.1 2,-0.0 2,-0.1 0.778 69.8 78.6 -84.7 -32.3 -8.7 -6.2 -6.5 6 103 A P - 0 0 22 0, 0.0 2,-0.4 0, 0.0 49,-0.1 -0.313 62.4-140.1 -83.6 166.0 -12.1 -5.0 -8.0 7 104 A Q - 0 0 144 46,-0.1 2,-0.4 43,-0.1 46,-0.0 -0.979 15.8-171.4-124.2 117.0 -12.8 -2.4 -10.7 8 105 A F - 0 0 71 -2,-0.4 3,-0.1 1,-0.1 4,-0.0 -0.877 15.5-164.3-106.0 143.2 -15.7 0.1 -10.5 9 106 A S S S+ 0 0 76 -2,-0.4 2,-0.3 1,-0.2 -1,-0.1 0.727 74.3 1.3 -88.0 -30.6 -16.8 2.5 -13.4 10 107 A Q S > S- 0 0 96 1,-0.0 4,-2.0 0, 0.0 3,-0.3 -0.955 83.3 -85.8-155.2 168.3 -19.0 4.8 -11.2 11 108 A Q H > S+ 0 0 122 -2,-0.3 4,-2.4 1,-0.2 5,-0.2 0.786 120.1 58.4 -53.0 -35.8 -20.3 5.5 -7.6 12 109 A R H > S+ 0 0 70 2,-0.2 4,-2.8 1,-0.2 -1,-0.2 0.970 108.2 43.2 -60.9 -53.9 -23.2 3.0 -8.0 13 110 A E H > S+ 0 0 0 -3,-0.3 4,-2.2 2,-0.2 5,-0.2 0.910 114.6 50.9 -59.4 -45.6 -21.0 -0.0 -8.7 14 111 A E H X S+ 0 0 66 -4,-2.0 4,-2.0 1,-0.2 -1,-0.2 0.906 113.6 45.2 -58.3 -43.6 -18.6 1.0 -5.9 15 112 A D H X S+ 0 0 40 -4,-2.4 4,-3.1 -5,-0.2 5,-0.2 0.911 109.5 55.6 -66.7 -42.7 -21.5 1.3 -3.5 16 113 A I H X S+ 0 0 0 -4,-2.8 4,-2.3 2,-0.2 -2,-0.2 0.922 112.1 42.4 -55.5 -49.3 -23.1 -2.0 -4.6 17 114 A Y H X S+ 0 0 44 -4,-2.2 4,-1.9 2,-0.2 5,-0.2 0.967 116.6 46.8 -63.4 -53.6 -19.9 -3.9 -3.9 18 115 A R H X S+ 0 0 98 -4,-2.0 4,-1.8 2,-0.2 -2,-0.2 0.884 112.7 50.8 -56.0 -44.4 -19.2 -2.1 -0.5 19 116 A F H X>S+ 0 0 44 -4,-3.1 4,-2.5 2,-0.2 5,-0.5 0.967 113.1 43.6 -58.9 -54.2 -22.8 -2.6 0.6 20 117 A L H X5S+ 0 0 2 -4,-2.3 4,-0.8 1,-0.2 -1,-0.2 0.734 113.7 53.4 -70.9 -19.0 -22.8 -6.4 -0.2 21 118 A K H <5S+ 0 0 148 -4,-1.9 -1,-0.2 -5,-0.2 -2,-0.2 0.837 113.1 43.5 -73.4 -36.3 -19.4 -6.7 1.5 22 119 A D H <5S+ 0 0 140 -4,-1.8 -2,-0.2 -3,-0.4 -3,-0.2 0.872 132.4 18.3 -83.5 -39.2 -20.7 -5.0 4.6 23 120 A N H <5S- 0 0 69 -4,-2.5 -3,-0.2 1,-0.3 -2,-0.1 0.706 102.3-131.1-100.1 -28.4 -24.1 -6.8 5.0 24 121 A G << + 0 0 18 -4,-0.8 -1,-0.3 -5,-0.5 -2,-0.1 -0.550 61.3 1.6 96.9-168.7 -23.5 -9.9 2.8 25 122 A P S S+ 0 0 82 0, 0.0 2,-0.3 0, 0.0 41,-0.2 -0.245 70.2 160.6 -63.0 128.3 -25.8 -11.3 0.0 26 123 A Q E -A 65 0A 58 39,-1.7 39,-2.8 -2,-0.1 2,-0.1 -0.922 39.5 -95.3-140.0 163.2 -29.0 -9.3 -0.6 27 124 A R E >> -A 64 0A 144 37,-0.3 4,-1.8 -2,-0.3 3,-0.9 -0.469 39.8-105.7 -80.5 159.3 -31.7 -9.0 -3.5 28 125 A A H 3> S+ 0 0 6 35,-0.9 4,-2.6 1,-0.3 5,-0.1 0.813 121.2 57.7 -54.6 -33.5 -31.5 -6.2 -6.1 29 126 A L H 3> S+ 0 0 84 2,-0.2 4,-2.2 1,-0.2 -1,-0.3 0.912 104.6 50.2 -65.3 -41.1 -34.4 -4.4 -4.4 30 127 A V H <> S+ 0 0 55 -3,-0.9 4,-1.9 1,-0.2 -2,-0.2 0.937 113.0 47.5 -59.4 -45.8 -32.4 -4.2 -1.1 31 128 A I H X S+ 0 0 0 -4,-1.8 4,-1.5 2,-0.2 -2,-0.2 0.907 108.9 54.7 -62.0 -43.3 -29.5 -2.8 -3.2 32 129 A A H >X>S+ 0 0 0 -4,-2.6 5,-2.7 1,-0.2 4,-0.8 0.952 111.5 42.3 -57.5 -54.5 -31.8 -0.3 -4.9 33 130 A Q H 3<5S+ 0 0 134 -4,-2.2 3,-0.5 1,-0.2 -1,-0.2 0.849 110.1 58.2 -63.9 -34.6 -33.1 1.2 -1.7 34 131 A A H 3<5S+ 0 0 50 -4,-1.9 -1,-0.2 1,-0.2 -2,-0.2 0.768 110.7 42.7 -68.7 -25.4 -29.6 1.2 -0.2 35 132 A L H <<5S- 0 0 39 -4,-1.5 -1,-0.2 -3,-0.8 -2,-0.2 0.526 124.8-105.0 -89.4 -12.0 -28.5 3.4 -3.1 36 133 A G T <5S+ 0 0 66 -4,-0.8 -3,-0.2 -3,-0.5 -2,-0.1 0.534 79.6 130.0 92.7 11.5 -31.7 5.6 -2.8 37 134 A M < - 0 0 22 -5,-2.7 -1,-0.3 -6,-0.2 3,-0.1 -0.254 55.1-136.7 -80.1 176.9 -33.4 4.1 -5.9 38 135 A R S S+ 0 0 222 1,-0.2 2,-0.3 -2,-0.1 -5,-0.1 0.781 73.1 33.6-108.0 -38.1 -37.0 2.7 -6.0 39 136 A T S >> S- 0 0 76 -7,-0.1 3,-1.2 1,-0.1 4,-0.6 -0.875 73.5-116.0-129.3 155.8 -37.0 -0.6 -8.0 40 137 A A H >> S+ 0 0 33 -2,-0.3 4,-1.9 1,-0.2 3,-0.7 0.793 113.3 64.2 -59.5 -28.1 -34.7 -3.6 -8.6 41 138 A K H 3> S+ 0 0 178 1,-0.2 4,-0.7 2,-0.2 -1,-0.2 0.794 91.8 62.3 -67.5 -27.6 -34.5 -2.6 -12.4 42 139 A D H <4 S+ 0 0 67 -3,-1.2 4,-0.2 1,-0.2 -1,-0.2 0.791 116.3 31.1 -70.2 -22.5 -32.7 0.7 -11.4 43 140 A V H XX S+ 0 0 0 -3,-0.7 4,-2.6 -4,-0.6 3,-0.8 0.717 97.1 84.1-103.3 -30.3 -29.8 -1.4 -10.0 44 141 A N H 3X S+ 0 0 62 -4,-1.9 4,-3.0 1,-0.3 5,-0.4 0.823 86.8 58.3 -49.4 -39.5 -29.9 -4.5 -12.3 45 142 A R H 3X S+ 0 0 171 -4,-0.7 4,-1.5 1,-0.2 -1,-0.3 0.925 114.2 37.2 -53.5 -49.8 -27.8 -2.6 -15.0 46 143 A D H <> S+ 0 0 3 -3,-0.8 4,-2.1 -4,-0.2 -2,-0.2 0.895 117.3 52.3 -70.4 -42.2 -25.0 -2.1 -12.4 47 144 A L H X S+ 0 0 0 -4,-2.6 4,-1.7 2,-0.2 -2,-0.2 0.954 113.7 40.6 -62.9 -52.9 -25.5 -5.5 -10.8 48 145 A Y H X S+ 0 0 112 -4,-3.0 4,-2.6 2,-0.2 -1,-0.2 0.858 111.1 59.4 -67.1 -33.2 -25.3 -7.6 -14.0 49 146 A R H < S+ 0 0 91 -4,-1.5 4,-0.5 -5,-0.4 -1,-0.2 0.931 106.8 46.8 -59.9 -43.0 -22.4 -5.4 -15.3 50 147 A M H ><>S+ 0 0 0 -4,-2.1 5,-2.9 2,-0.2 6,-1.0 0.842 110.2 53.1 -69.9 -32.7 -20.4 -6.4 -12.2 51 148 A K H ><5S+ 0 0 92 -4,-1.7 3,-1.3 4,-0.3 -2,-0.2 0.926 105.2 54.8 -64.5 -39.4 -21.3 -10.1 -12.8 52 149 A S T 3<5S+ 0 0 104 -4,-2.6 -1,-0.2 1,-0.2 -2,-0.2 0.614 112.3 44.4 -68.4 -14.4 -20.0 -9.7 -16.4 53 150 A R T < 5S- 0 0 81 -3,-0.6 -1,-0.2 -4,-0.5 -2,-0.2 0.153 121.5 -99.9-115.5 16.0 -16.6 -8.5 -15.0 54 151 A H T < 5S+ 0 0 109 -3,-1.3 -3,-0.2 2,-0.2 -2,-0.1 0.838 98.5 101.0 71.8 38.5 -16.2 -11.1 -12.1 55 152 A L S - 0 0 58 5,-2.0 4,-1.4 -2,-0.3 5,-0.3 -0.774 3.8-151.1 -87.1 131.0 -28.7 -16.5 -7.3 60 157 A E T 4 S+ 0 0 173 -2,-0.5 -1,-0.1 1,-0.2 -2,-0.0 0.643 91.4 66.1 -71.0 -14.6 -31.3 -18.0 -9.6 61 158 A Q T 4 S- 0 0 170 1,-0.1 -1,-0.2 3,-0.1 -3,-0.0 0.878 129.0 -6.7 -83.3 -40.8 -33.2 -19.3 -6.5 62 159 A S T 4 S- 0 0 54 -3,-0.2 -2,-0.2 2,-0.1 -1,-0.1 0.144 95.9-105.2-138.9 15.2 -34.2 -15.9 -4.8 63 160 A K < + 0 0 123 -4,-1.4 -35,-0.9 1,-0.2 2,-0.6 0.856 60.7 169.2 53.1 40.7 -32.4 -13.3 -7.1 64 161 A A E -A 27 0A 20 -5,-0.3 -5,-2.0 -37,-0.2 2,-0.5 -0.741 28.5-141.8 -84.5 119.1 -29.9 -12.8 -4.3 65 162 A W E +AB 26 58A 6 -39,-2.8 -39,-1.7 -2,-0.6 2,-0.4 -0.734 23.9 179.9 -84.7 124.9 -26.9 -10.7 -5.4 66 163 A T E - B 0 57A 41 -9,-2.7 -9,-1.9 -2,-0.5 2,-0.1 -0.987 35.4-103.7-130.8 129.2 -23.6 -11.9 -3.9 67 164 A I E - B 0 56A 42 -2,-0.4 2,-1.2 -11,-0.2 -11,-0.3 -0.366 44.8-105.7 -56.6 127.8 -20.1 -10.5 -4.4 68 165 A Y 0 0 93 -13,-1.6 -1,-0.1 1,-0.2 -12,-0.1 -0.441 360.0 360.0 -66.9 91.6 -18.1 -12.7 -6.8 69 166 A R 0 0 267 -2,-1.2 -1,-0.2 -12,-0.0 -13,-0.0 0.925 360.0 360.0 49.9 360.0 -15.6 -14.5 -4.5