==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=17-JUN-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 03-NOV-10 2L5R . COMPND 2 MOLECULE: ANTIMICROBIAL PEPTIDE ALYTESERIN-1C; . SOURCE 2 SYNTHETIC: YES; . AUTHOR A.P.SUBASINGHAGE,C.M.HEWAGE,M.CONLON . 23 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2331.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 23100.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 8.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 17 73.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 13.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G > 0 0 96 0, 0.0 4,-1.3 0, 0.0 3,-0.3 0.000 360.0 360.0 360.0 166.4 -2.9 -15.1 3.4 2 2 A L H > + 0 0 111 1,-0.2 4,-3.2 2,-0.2 5,-0.2 0.726 360.0 69.3 -67.0 -21.6 -0.1 -12.5 3.4 3 3 A K H > S+ 0 0 144 2,-0.2 4,-3.0 1,-0.2 5,-0.4 0.940 100.5 44.5 -66.4 -46.1 -1.0 -11.6 -0.2 4 4 A E H >>S+ 0 0 146 -3,-0.3 4,-2.3 1,-0.2 5,-0.6 0.935 116.9 47.2 -59.5 -45.4 -4.3 -10.0 0.8 5 5 A I H X5S+ 0 0 126 -4,-1.3 4,-2.0 3,-0.2 5,-0.4 0.936 118.9 40.0 -63.3 -46.6 -2.6 -8.2 3.7 6 6 A F H X>S+ 0 0 121 -4,-3.2 4,-2.5 3,-0.2 5,-0.6 0.991 119.0 43.2 -65.4 -60.8 0.3 -7.0 1.5 7 7 A K H X5S+ 0 0 145 -4,-3.0 4,-1.7 -5,-0.2 -3,-0.2 0.908 124.6 34.2 -57.1 -50.2 -1.6 -6.1 -1.6 8 8 A A H X5S+ 0 0 64 -4,-2.3 4,-2.4 -5,-0.4 5,-0.3 0.951 119.7 50.0 -70.5 -48.8 -4.5 -4.3 0.1 9 9 A G H XS+ 0 0 75 -4,-3.0 4,-2.3 -5,-0.2 5,-0.5 0.862 107.1 47.9 -51.1 -38.2 1.2 3.8 -0.3 15 15 A K H X5S+ 0 0 148 -4,-0.7 4,-2.4 -3,-0.3 -1,-0.2 0.987 114.0 44.6 -66.7 -55.3 -1.3 6.3 -1.7 16 16 A G H <5S+ 0 0 63 -4,-1.7 4,-0.4 2,-0.2 -2,-0.2 0.849 125.7 33.5 -55.9 -36.9 -1.9 8.1 1.6 17 17 A I H >X5S+ 0 0 125 -4,-3.1 3,-1.1 2,-0.1 4,-0.7 0.964 122.4 41.0 -84.9 -60.7 1.8 8.2 2.3 18 18 A A H >X5S+ 0 0 34 -4,-2.3 4,-1.9 -5,-0.3 3,-0.7 0.848 97.9 77.7 -60.4 -36.1 3.5 8.5 -1.1 19 19 A A H 3<