==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-APR-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METAL BINDING PROTEIN 08-NOV-10 2L5U . COMPND 2 MOLECULE: CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 4; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR R.E.MANSFIELD,A.H.KWAN,J.P.MACKAY . 61 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4335.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 29 47.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 4 6.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 16.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 8.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 5 8.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 23 0, 0.0 2,-0.2 0, 0.0 24,-0.1 0.000 360.0 360.0 360.0 138.6 7.6 -1.4 8.0 2 2 A P - 0 0 101 0, 0.0 3,-0.1 0, 0.0 10,-0.0 -0.472 360.0-158.7 -76.8 140.6 5.0 -3.9 9.0 3 3 A L - 0 0 42 -2,-0.2 2,-0.5 1,-0.2 45,-0.4 0.664 45.8-115.2 -86.8 -18.5 1.3 -2.9 8.9 4 4 A G S S+ 0 0 52 43,-0.1 2,-0.6 2,-0.0 -1,-0.2 -0.902 84.5 21.4 122.9-101.5 0.4 -5.6 11.3 5 5 A S + 0 0 106 -2,-0.5 2,-0.3 -3,-0.1 22,-0.0 -0.916 69.9 163.3-109.9 113.4 -1.9 -8.3 9.9 6 6 A Y - 0 0 82 -2,-0.6 22,-0.2 1,-0.2 21,-0.1 -0.918 35.7-133.0-125.3 155.2 -1.9 -8.6 6.1 7 7 A E S S+ 0 0 141 20,-3.0 2,-0.2 -2,-0.3 21,-0.2 0.999 85.8 34.8 -68.5 -73.3 -3.1 -11.5 3.8 8 8 A T S S- 0 0 42 20,-0.3 2,-0.2 19,-0.3 -1,-0.1 -0.583 86.0-113.7 -89.3 145.6 -0.3 -12.0 1.3 9 9 A D + 0 0 144 -2,-0.2 2,-0.3 21,-0.0 -1,-0.1 -0.524 45.9 170.6 -72.7 145.0 3.4 -11.7 2.1 10 10 A H - 0 0 22 -2,-0.2 21,-0.1 1,-0.1 22,-0.0 -0.941 34.2 -71.3-152.6 169.8 5.0 -8.8 0.2 11 11 A Q - 0 0 59 19,-0.6 -1,-0.1 -2,-0.3 4,-0.1 -0.077 29.2-137.2 -60.7 162.1 8.1 -6.7 -0.2 12 12 A D S S+ 0 0 93 2,-0.1 9,-0.4 20,-0.1 2,-0.3 -0.125 78.6 76.5-113.5 33.6 9.2 -4.2 2.4 13 13 A Y S S- 0 0 102 7,-0.2 7,-0.3 19,-0.1 2,-0.3 -0.981 87.7 -97.8-142.2 153.3 10.1 -1.5 -0.1 14 14 A C > - 0 0 0 5,-2.6 4,-1.5 -2,-0.3 19,-0.3 -0.540 18.0-155.4 -71.8 128.1 8.3 0.9 -2.4 15 15 A E T 4 S+ 0 0 76 17,-2.1 -1,-0.2 -2,-0.3 18,-0.1 0.593 98.2 45.9 -76.6 -9.7 7.8 -0.3 -5.9 16 16 A V T 4 S+ 0 0 77 16,-0.3 -1,-0.1 3,-0.2 17,-0.1 0.859 126.8 23.4 -96.7 -49.1 7.6 3.4 -6.8 17 17 A C T 4 S- 0 0 58 2,-0.2 -2,-0.2 3,-0.0 3,-0.1 0.629 97.2-130.9 -91.5 -16.1 10.5 4.9 -4.9 18 18 A Q S < S+ 0 0 130 -4,-1.5 2,-0.3 1,-0.2 -3,-0.2 0.853 75.0 97.2 65.6 37.2 12.4 1.6 -4.7 19 19 A Q - 0 0 134 -5,-0.2 -5,-2.6 1,-0.1 -2,-0.2 -0.988 60.9-144.4-152.3 147.6 13.0 2.2 -1.0 20 20 A G + 0 0 24 -7,-0.3 2,-0.5 -2,-0.3 -7,-0.2 0.466 49.9 102.2 -86.6-132.4 11.3 1.0 2.2 21 21 A G S S+ 0 0 41 -9,-0.4 2,-1.9 1,-0.1 -1,-0.0 -0.763 95.1 12.3 91.4-129.1 10.7 2.8 5.4 22 22 A E S S+ 0 0 169 -2,-0.5 13,-0.5 2,-0.0 2,-0.2 -0.388 92.1 145.0 -84.4 59.9 7.2 4.2 6.0 23 23 A I E -A 34 0A 8 -2,-1.9 2,-0.4 11,-0.2 11,-0.3 -0.524 46.6-124.7 -90.1 163.9 5.7 2.3 3.2 24 24 A I E -A 33 0A 6 9,-3.3 9,-1.9 -2,-0.2 2,-0.6 -0.937 14.7-151.4-113.2 134.9 2.2 0.9 3.2 25 25 A L E -A 32 0A 3 -2,-0.4 25,-0.2 7,-0.2 7,-0.2 -0.924 22.4-121.5-107.2 117.6 1.5 -2.8 2.5 26 26 A C - 0 0 0 5,-0.7 25,-0.3 -2,-0.6 -18,-0.1 -0.285 15.9-133.9 -52.6 138.5 -1.8 -3.7 0.9 27 27 A D S S+ 0 0 20 23,-2.6 -20,-3.0 -21,-0.1 -19,-0.3 0.611 102.8 22.7 -72.4 -10.4 -3.7 -6.0 3.2 28 28 A T S S+ 0 0 41 22,-0.2 -20,-0.3 -21,-0.2 -1,-0.1 0.716 112.9 64.8-121.9 -46.5 -4.5 -8.1 0.1 29 29 A C S S- 0 0 15 1,-0.1 -21,-0.1 -22,-0.1 -22,-0.1 -0.422 78.6-120.5 -86.9 158.1 -2.0 -7.4 -2.7 30 30 A P S S+ 0 0 75 0, 0.0 -19,-0.6 0, 0.0 2,-0.1 0.084 76.5 124.8 -78.1 24.6 1.8 -8.2 -2.7 31 31 A R - 0 0 58 -21,-0.1 -5,-0.7 -17,-0.0 2,-0.3 -0.468 38.0-178.5 -86.6 157.2 2.2 -4.4 -3.3 32 32 A A E +A 25 0A 0 -7,-0.2 -17,-2.1 -2,-0.1 2,-0.3 -0.844 19.6 130.8-159.3 117.9 4.3 -2.1 -1.1 33 33 A Y E -A 24 0A 9 -9,-1.9 -9,-3.3 -19,-0.3 -19,-0.1 -0.975 52.6 -92.4-161.3 158.4 4.7 1.7 -1.5 34 34 A H E > -A 23 0A 33 -11,-0.3 4,-0.8 -2,-0.3 -11,-0.2 -0.217 37.2-113.7 -71.3 167.2 4.6 4.9 0.5 35 35 A M H > S+ 0 0 36 -13,-0.5 4,-2.8 1,-0.2 7,-0.3 0.871 113.5 56.2 -68.2 -35.9 1.4 6.9 0.8 36 36 A V H 4 S+ 0 0 109 1,-0.2 -1,-0.2 2,-0.2 5,-0.1 0.818 104.7 50.5 -70.6 -33.1 2.8 9.8 -1.1 37 37 A C H 4 S+ 0 0 40 2,-0.2 -1,-0.2 1,-0.1 -2,-0.2 0.727 113.7 47.8 -76.7 -24.3 3.7 7.8 -4.2 38 38 A L H < S- 0 0 42 -4,-0.8 -2,-0.2 -3,-0.2 -1,-0.1 0.943 136.8 -31.0 -76.5 -54.5 0.2 6.4 -4.2 39 39 A D >< - 0 0 67 -4,-2.8 3,-1.2 3,-0.2 -1,-0.2 -0.782 38.9-149.2-172.0 118.9 -1.6 9.7 -3.8 40 40 A P T 3 S+ 0 0 119 0, 0.0 -4,-0.1 0, 0.0 -3,-0.1 0.749 105.3 59.7 -61.4 -22.1 -0.7 13.0 -2.0 41 41 A D T 3 S+ 0 0 125 -5,-0.1 2,-0.9 -6,-0.1 3,-0.2 0.706 80.6 98.1 -79.5 -20.7 -4.5 13.3 -1.4 42 42 A M < + 0 0 59 -3,-1.2 -3,-0.2 -7,-0.3 -4,-0.1 -0.579 36.1 147.8 -75.1 106.6 -4.6 10.1 0.6 43 43 A E + 0 0 173 -2,-0.9 2,-0.5 2,-0.1 -1,-0.2 0.567 30.7 112.4-114.3 -18.6 -4.4 11.1 4.2 44 44 A K S S- 0 0 116 -3,-0.2 3,-0.0 1,-0.1 -2,-0.0 -0.464 71.3-125.5 -63.4 112.9 -6.5 8.4 5.8 45 45 A A - 0 0 51 -2,-0.5 2,-1.1 1,-0.1 -1,-0.1 -0.251 21.5-105.9 -63.5 143.7 -4.0 6.4 7.8 46 46 A P + 0 0 40 0, 0.0 2,-0.7 0, 0.0 4,-0.2 -0.606 44.6 178.1 -72.2 99.6 -3.7 2.6 7.3 47 47 A E - 0 0 134 -2,-1.1 2,-1.1 2,-0.3 -43,-0.1 -0.868 58.8 -57.4-111.1 100.3 -5.4 1.2 10.3 48 48 A G S S+ 0 0 47 -2,-0.7 2,-1.1 -45,-0.4 -43,-0.1 -0.563 130.4 45.5 73.8-100.4 -5.6 -2.6 10.3 49 49 A K S S+ 0 0 141 -2,-1.1 2,-0.5 -43,-0.1 -2,-0.3 -0.677 70.5 161.2 -81.1 102.0 -7.4 -3.4 7.0 50 50 A W - 0 0 13 -2,-1.1 -23,-2.6 -25,-0.2 2,-0.5 -0.959 17.9-167.5-123.8 110.1 -5.8 -1.2 4.4 51 51 A S - 0 0 44 -2,-0.5 5,-0.1 -25,-0.3 -25,-0.1 -0.850 29.2-108.0 -98.8 133.7 -6.3 -2.2 0.8 52 52 A C >> - 0 0 4 -2,-0.5 3,-0.8 1,-0.1 4,-0.6 -0.044 22.9-115.6 -52.4 156.2 -4.2 -0.5 -1.8 53 53 A P T 34 S+ 0 0 44 0, 0.0 4,-0.4 0, 0.0 -1,-0.1 0.626 117.3 63.9 -68.7 -12.5 -5.7 2.1 -4.2 54 54 A H T >> S+ 0 0 86 1,-0.2 4,-0.9 2,-0.2 3,-0.8 0.767 86.5 73.5 -79.7 -27.1 -4.9 -0.4 -7.0 55 55 A C G X4 S+ 0 0 38 -3,-0.8 3,-1.1 1,-0.3 4,-0.2 0.901 93.9 49.8 -49.9 -50.8 -7.3 -2.8 -5.4 56 56 A E G >< S+ 0 0 126 -4,-0.6 3,-0.6 1,-0.3 5,-0.3 0.754 107.7 55.8 -65.9 -22.5 -10.4 -0.9 -6.6 57 57 A K G <4 S+ 0 0 130 -3,-0.8 -1,-0.3 -4,-0.4 -2,-0.2 0.665 98.6 61.3 -82.5 -18.1 -8.9 -0.9 -10.1 58 58 A E G << S+ 0 0 108 -3,-1.1 -1,-0.2 -4,-0.9 2,-0.2 0.423 89.9 94.9 -87.0 -0.8 -8.6 -4.7 -10.1 59 59 A G S < S- 0 0 37 -3,-0.6 2,-1.1 -4,-0.2 -3,-0.0 -0.543 87.1-115.3 -90.0 160.4 -12.3 -4.9 -9.7 60 60 A I 0 0 180 -2,-0.2 -3,-0.1 0, 0.0 -1,-0.1 -0.302 360.0 360.0 -90.6 51.3 -14.8 -5.3 -12.5 61 61 A Q 0 0 240 -2,-1.1 -2,-0.1 -5,-0.3 0, 0.0 -0.857 360.0 360.0 -96.5 360.0 -16.4 -1.9 -11.9