==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-OCT-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HORMONE 11-NOV-10 2L60 . COMPND 2 MOLECULE: PEPTIDE YY; . SOURCE 2 SYNTHETIC: YES . AUTHOR N.L.PEDERSEN,S.JURT,O.ZERBE,K.J.JENSEN . 40 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5164.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 30 75.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 20.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 21 52.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A Y 0 0 258 0, 0.0 3,-0.2 0, 0.0 2,-0.1 0.000 360.0 360.0 360.0 51.4 -2.2 13.6 -10.4 2 2 A L > + 0 0 112 1,-0.2 4,-1.8 2,-0.1 0, 0.0 -0.415 360.0 138.4-118.8 56.5 1.3 13.4 -8.8 3 3 A E H > S+ 0 0 163 2,-0.2 4,-0.9 1,-0.2 -1,-0.2 0.899 76.5 46.7 -65.0 -43.3 2.9 10.7 -11.0 4 4 A R H >> S+ 0 0 214 -3,-0.2 4,-1.2 2,-0.2 3,-1.1 0.957 112.2 48.6 -64.2 -53.0 6.3 12.6 -11.2 5 5 A E H 3> S+ 0 0 102 1,-0.2 4,-1.7 2,-0.2 -2,-0.2 0.852 99.6 69.7 -57.0 -33.4 6.4 13.3 -7.4 6 6 A L H 3X S+ 0 0 100 -4,-1.8 4,-3.1 2,-0.2 -1,-0.2 0.867 98.5 49.5 -50.4 -41.4 5.6 9.6 -6.9 7 7 A K H X S+ 0 0 90 -4,-1.7 4,-2.9 2,-0.2 3,-1.2 0.944 108.3 47.6 -83.7 -56.4 8.4 9.8 -3.0 10 10 A E H 3X S+ 0 0 131 -4,-3.1 4,-2.9 1,-0.3 -2,-0.2 0.874 109.4 58.4 -55.6 -36.5 9.4 6.1 -3.7 11 11 A R H 3< S+ 0 0 163 -4,-2.2 -1,-0.3 -5,-0.2 -2,-0.2 0.791 112.9 37.7 -60.0 -35.9 13.1 7.4 -3.6 12 12 A E H X4 S+ 0 0 123 -3,-1.2 3,-2.2 -4,-0.5 4,-0.2 0.919 115.9 50.4 -83.0 -48.1 12.5 8.8 -0.1 13 13 A L H >< S+ 0 0 89 -4,-2.9 3,-2.3 1,-0.3 -2,-0.2 0.895 97.6 71.1 -53.4 -40.8 10.3 5.9 1.2 14 14 A K T 3< S+ 0 0 117 -4,-2.9 -1,-0.3 1,-0.3 -2,-0.2 0.656 72.6 88.8 -51.4 -18.5 13.1 3.5 -0.1 15 15 A K T < S+ 0 0 166 -3,-2.2 2,-0.4 -5,-0.1 -1,-0.3 0.862 86.2 58.2 -44.5 -42.2 15.2 4.8 2.8 16 16 A L S < S- 0 0 123 -3,-2.3 5,-0.1 -4,-0.2 0, 0.0 -0.782 117.3 -83.3 -92.6 141.1 13.7 1.9 4.7 17 17 A S >> - 0 0 63 -2,-0.4 4,-1.7 1,-0.2 3,-0.6 -0.160 32.6-150.2 -44.3 114.1 14.2 -1.6 3.4 18 18 A P H 3> S+ 0 0 82 0, 0.0 4,-0.7 0, 0.0 -1,-0.2 0.628 99.3 51.9 -68.7 -10.1 11.5 -2.2 0.7 19 19 A E H 3> S+ 0 0 149 2,-0.2 4,-1.6 3,-0.1 5,-0.1 0.748 103.5 56.2 -91.4 -28.3 11.6 -5.9 1.6 20 20 A E H <> S+ 0 0 95 -3,-0.6 4,-2.1 2,-0.2 5,-0.2 0.933 106.6 49.8 -71.6 -41.7 11.1 -5.3 5.4 21 21 A L H X S+ 0 0 85 -4,-1.7 4,-1.9 1,-0.2 -1,-0.2 0.950 108.2 52.5 -60.2 -50.4 7.8 -3.3 4.8 22 22 A N H X S+ 0 0 104 -4,-0.7 4,-2.6 2,-0.2 -1,-0.2 0.859 107.6 53.7 -55.2 -38.2 6.4 -6.2 2.5 23 23 A R H X S+ 0 0 189 -4,-1.6 4,-1.5 1,-0.2 -1,-0.2 0.965 113.9 40.2 -56.2 -55.9 7.2 -8.6 5.4 24 24 A Y H < S+ 0 0 142 -4,-2.1 -2,-0.2 1,-0.2 -1,-0.2 0.682 113.6 58.9 -66.7 -20.6 5.1 -6.5 7.8 25 25 A Y H >X S+ 0 0 151 -4,-1.9 4,-3.2 -5,-0.2 3,-1.1 0.921 103.1 48.1 -76.0 -47.6 2.6 -5.9 5.0 26 26 A A H 3X S+ 0 0 59 -4,-2.6 4,-2.6 1,-0.3 5,-0.3 0.920 110.1 53.0 -62.9 -41.2 1.7 -9.6 4.5 27 27 A S H 3< S+ 0 0 64 -4,-1.5 -1,-0.3 -5,-0.2 -2,-0.2 0.589 116.6 41.3 -67.7 -9.9 1.3 -10.1 8.3 28 28 A L H <> S+ 0 0 100 -3,-1.1 4,-2.1 -4,-0.2 -2,-0.2 0.750 113.6 50.2-101.5 -38.8 -1.1 -7.1 8.1 29 29 A R H X S+ 0 0 172 -4,-3.2 4,-1.8 2,-0.2 -2,-0.2 0.921 107.4 54.0 -65.6 -45.0 -3.0 -8.1 4.8 30 30 A H H < S+ 0 0 129 -4,-2.6 4,-0.3 -5,-0.2 -1,-0.2 0.819 108.7 52.1 -62.2 -29.9 -3.6 -11.6 6.0 31 31 A Y H >> S+ 0 0 147 -5,-0.3 3,-3.1 2,-0.2 4,-1.9 0.992 105.6 51.1 -61.3 -63.2 -5.2 -10.0 9.1 32 32 A L H 3X>S+ 0 0 96 -4,-2.1 4,-1.6 1,-0.3 5,-0.6 0.759 94.9 74.2 -53.7 -28.0 -7.6 -7.7 7.0 33 33 A N H 3<5S+ 0 0 109 -4,-1.8 -1,-0.3 1,-0.2 -2,-0.2 0.719 125.1 5.2 -48.4 -31.9 -8.6 -10.9 5.1 34 34 A L H <45S+ 0 0 99 -3,-3.1 -2,-0.2 -4,-0.3 -1,-0.2 0.325 126.0 67.3-137.9 3.4 -10.6 -11.7 8.3 35 35 A V H <5S+ 0 0 67 -4,-1.9 -3,-0.2 2,-0.1 -2,-0.2 0.639 110.8 34.5 -96.0 -20.1 -10.1 -8.6 10.5 36 36 A T T ><5S+ 0 0 39 -4,-1.6 3,-1.9 -5,-0.3 -3,-0.1 0.723 97.2 80.5-107.9 -25.4 -12.2 -6.3 8.2 37 37 A R T 3