==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=18-JAN-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 24-NOV-10 2L6Q . COMPND 2 MOLECULE: HEAD-TO-TAIL JOINING PROTEIN W (GPW) FROM BACTERI . SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE LAMBDA; . AUTHOR L.SBORGI,A.VERMA,V.MUNOZ,E.DE ALBA . 62 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5601.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 42 67.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 11.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 3.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 9.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 27 43.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 148 0, 0.0 2,-0.2 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0 112.9 10.3 10.0 7.7 2 2 A V > + 0 0 86 1,-0.1 3,-0.7 2,-0.0 4,-0.2 -0.631 360.0 168.2-144.0 83.8 8.2 7.3 9.4 3 3 A R T 3> + 0 0 74 1,-0.2 4,-3.2 -2,-0.2 5,-0.4 0.334 43.6 122.7 -78.2 13.4 5.3 5.8 7.4 4 4 A Q H 3> S+ 0 0 128 2,-0.2 4,-1.4 3,-0.2 -1,-0.2 0.856 75.9 43.0 -43.5 -38.8 5.2 3.1 10.1 5 5 A E H X> S+ 0 0 126 -3,-0.7 4,-1.3 2,-0.2 3,-0.7 0.980 118.8 36.5 -74.7 -75.4 1.5 4.1 10.6 6 6 A E H 3> S+ 0 0 65 1,-0.2 4,-1.8 -4,-0.2 3,-0.3 0.860 113.4 64.2 -47.3 -33.2 0.0 4.5 7.1 7 7 A L H >X S+ 0 0 28 -4,-3.2 4,-1.9 1,-0.2 3,-0.7 0.974 98.3 51.2 -56.1 -54.6 2.3 1.6 6.1 8 8 A A H -A 31 0A 54 3,-2.3 3,-1.9 -2,-1.0 -2,-0.1 -0.973 69.2 -16.0-130.9 121.1 -4.5 9.8 1.9 29 29 A D T 3 S- 0 0 119 -2,-0.4 -1,-0.2 1,-0.3 3,-0.1 0.970 121.0 -60.7 53.1 57.2 -4.3 13.6 1.7 30 30 A G T 3 S+ 0 0 92 1,-0.2 2,-0.5 -3,-0.1 -1,-0.3 0.682 119.8 115.5 47.4 11.0 -7.9 14.1 2.7 31 31 A R E < -A 28 0A 162 -3,-1.9 -3,-2.3 2,-0.0 2,-0.4 -0.934 56.6-152.7-114.8 130.0 -8.5 12.1 -0.6 32 32 A R E -A 27 0A 180 -2,-0.5 2,-0.4 -5,-0.2 -5,-0.2 -0.825 14.7-171.6 -99.2 134.2 -10.2 8.7 -0.6 33 33 A V E -A 26 0A 54 -7,-0.9 -7,-0.7 -2,-0.4 2,-0.3 -0.960 12.8-138.6-127.7 144.3 -9.2 6.3 -3.5 34 34 A E E -A 25 0A 121 -2,-0.4 2,-0.4 -9,-0.2 -9,-0.2 -0.706 14.1-169.3-100.8 153.6 -10.7 2.9 -4.5 35 35 A F E -A 24 0A 41 -11,-0.8 -11,-0.6 -2,-0.3 2,-0.3 -0.999 3.6-160.9-141.2 136.3 -8.9 -0.2 -5.6 36 36 A T E > -A 23 0A 70 -2,-0.4 3,-3.6 -13,-0.1 4,-0.4 -0.864 39.9-103.2-117.9 153.0 -10.3 -3.5 -7.1 37 37 A A G > S+ 0 0 54 -15,-0.5 3,-1.0 -2,-0.3 4,-0.1 0.738 117.9 73.8 -45.8 -18.8 -8.7 -6.9 -7.3 38 38 A T G 3 S+ 0 0 131 1,-0.2 -1,-0.3 -16,-0.2 3,-0.2 0.794 103.2 36.8 -69.5 -23.8 -8.1 -6.0 -10.9 39 39 A S G <> S+ 0 0 23 -3,-3.6 4,-1.8 1,-0.1 3,-0.3 0.197 73.9 123.7-111.3 16.2 -5.3 -3.6 -9.9 40 40 A V H <> S+ 0 0 49 -3,-1.0 4,-1.0 -4,-0.4 -1,-0.1 0.713 76.1 58.7 -50.6 -12.5 -3.9 -5.8 -7.0 41 41 A S H > S+ 0 0 80 -3,-0.2 4,-1.4 2,-0.2 -1,-0.2 0.942 100.4 47.5 -85.0 -52.8 -0.7 -5.4 -9.1 42 42 A D H > S+ 0 0 81 -3,-0.3 4,-1.7 1,-0.2 -2,-0.2 0.821 111.2 56.0 -60.7 -23.8 -0.3 -1.6 -9.1 43 43 A L H X S+ 0 0 9 -4,-1.8 4,-1.7 2,-0.2 5,-0.2 0.930 97.1 60.8 -74.0 -41.6 -0.9 -1.7 -5.4 44 44 A K H X S+ 0 0 126 -4,-1.0 4,-1.3 -5,-0.3 -1,-0.2 0.898 107.1 48.2 -51.4 -37.2 1.9 -4.2 -4.8 45 45 A K H X S+ 0 0 155 -4,-1.4 4,-2.9 1,-0.2 3,-0.5 0.946 102.9 58.9 -70.3 -45.9 4.2 -1.4 -6.2 46 46 A Y H X S+ 0 0 68 -4,-1.7 4,-1.1 1,-0.3 -1,-0.2 0.839 107.7 49.8 -53.1 -28.8 2.7 1.3 -4.0 47 47 A I H X S+ 0 0 37 -4,-1.7 4,-1.2 2,-0.2 -1,-0.3 0.855 110.9 48.0 -79.5 -33.5 3.8 -0.8 -1.1 48 48 A A H X S+ 0 0 56 -4,-1.3 4,-1.2 -3,-0.5 -2,-0.2 0.883 109.3 53.0 -74.2 -37.0 7.4 -1.3 -2.5 49 49 A E H X S+ 0 0 114 -4,-2.9 4,-1.0 1,-0.2 -1,-0.2 0.873 107.2 51.8 -68.4 -33.9 7.8 2.5 -3.2 50 50 A L H X S+ 0 0 15 -4,-1.1 4,-0.9 -5,-0.3 5,-0.3 0.877 104.1 57.1 -72.1 -32.3 6.9 3.4 0.4 51 51 A E H X S+ 0 0 92 -4,-1.2 4,-1.5 1,-0.2 -1,-0.2 0.856 108.4 47.5 -66.5 -29.4 9.4 1.0 1.8 52 52 A V H < S+ 0 0 97 -4,-1.2 -1,-0.2 1,-0.2 5,-0.2 0.731 111.7 50.0 -82.4 -20.5 12.1 2.8 -0.2 53 53 A Q H < S+ 0 0 92 -4,-1.0 -1,-0.2 -3,-0.2 -2,-0.2 0.561 124.1 30.4 -92.0 -8.1 10.9 6.2 1.0 54 54 A T H < S+ 0 0 30 -4,-0.9 -2,-0.2 -5,-0.1 -3,-0.2 0.504 106.2 84.8-122.0 -16.5 10.9 5.0 4.7 55 55 A G S < S- 0 0 34 -4,-1.5 -3,-0.1 -5,-0.3 -4,-0.0 0.029 78.3-124.0 -73.6-168.8 13.8 2.5 4.5 56 56 A M S S+ 0 0 190 -5,-0.0 2,-0.2 0, 0.0 -4,-0.1 -0.424 72.9 68.9-139.0 63.1 17.5 3.6 4.9 57 57 A T - 0 0 81 -5,-0.2 -2,-0.0 1,-0.1 0, 0.0 -0.795 43.3-168.3-153.9-162.5 19.4 2.3 1.9 58 58 A Q + 0 0 152 -2,-0.2 -1,-0.1 0, 0.0 -6,-0.0 0.262 67.1 94.1-172.2 -27.0 19.7 2.9 -1.9 59 59 A R S S- 0 0 179 1,-0.2 2,-2.0 2,-0.1 -2,-0.0 0.662 79.0-144.6 -56.5 -8.9 21.8 0.1 -3.4 60 60 A R S S+ 0 0 225 1,-0.2 -1,-0.2 2,-0.1 -3,-0.0 0.046 88.2 85.5 68.8 -36.4 18.3 -1.4 -4.1 61 61 A R 0 0 182 -2,-2.0 -1,-0.2 1,-0.0 -2,-0.1 0.554 360.0 360.0 -72.6 -2.1 19.9 -4.8 -3.3 62 62 A G 0 0 113 0, 0.0 -2,-0.1 0, 0.0 -5,-0.0 -0.508 360.0 360.0 -66.0 360.0 19.2 -4.1 0.3