==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-NOV-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GENE REGULATION 27-DEC-10 2L7Z . COMPND 2 MOLECULE: HOMEOBOX PROTEIN HOX-A13; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR J.AMES . 73 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7081.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 40 54.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 32 43.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 146 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 76.8 -22.2 -0.1 10.3 2 2 A S + 0 0 97 2,-0.0 0, 0.0 3,-0.0 0, 0.0 -0.339 360.0 115.8-153.2-122.9 -25.1 1.2 12.4 3 3 A H S S- 0 0 164 -2,-0.1 3,-0.1 2,-0.0 0, 0.0 0.164 80.0 -45.9 59.4 171.3 -27.3 4.3 12.3 4 4 A M S S- 0 0 166 1,-0.1 2,-0.1 3,-0.0 -2,-0.0 0.121 76.5 -81.5 -59.6-175.3 -31.0 4.0 11.6 5 5 A L S S+ 0 0 137 2,-0.0 -1,-0.1 0, 0.0 -3,-0.0 -0.281 91.0 49.7 -85.0 176.2 -32.3 1.9 8.8 6 6 A E + 0 0 173 -3,-0.1 0, 0.0 -2,-0.1 0, 0.0 0.471 45.1 176.3 70.0 140.5 -32.5 3.0 5.1 7 7 A G - 0 0 58 2,-0.1 -2,-0.0 0, 0.0 -1,-0.0 0.473 10.8-166.0-143.8 -46.7 -29.5 4.5 3.3 8 8 A R + 0 0 236 1,-0.2 2,-0.3 2,-0.0 0, 0.0 0.954 44.4 118.7 47.2 81.1 -30.2 5.1 -0.3 9 9 A K + 0 0 151 1,-0.0 -1,-0.2 3,-0.0 3,-0.1 -0.954 35.2 177.4-160.1 176.5 -26.7 5.7 -1.6 10 10 A K + 0 0 147 1,-0.4 2,-0.2 -2,-0.3 -1,-0.0 -0.007 62.6 38.2-149.3-100.3 -24.0 4.5 -4.0 11 11 A R - 0 0 227 1,-0.0 -1,-0.4 -2,-0.0 0, 0.0 -0.489 69.9-149.6 -69.7 131.5 -20.6 5.9 -4.7 12 12 A V - 0 0 111 -2,-0.2 -1,-0.0 1,-0.2 -3,-0.0 -0.774 11.5-119.2-104.7 149.2 -18.9 7.3 -1.5 13 13 A P - 0 0 99 0, 0.0 -1,-0.2 0, 0.0 3,-0.1 0.395 33.7 -99.6 -61.3-154.5 -16.4 10.2 -1.4 14 14 A Y S S- 0 0 193 1,-0.4 2,-0.3 2,-0.0 3,-0.0 0.850 80.3 -22.1 -98.6 -76.6 -12.9 9.9 -0.1 15 15 A T > - 0 0 53 1,-0.1 4,-2.4 -3,-0.0 -1,-0.4 -0.929 49.5-122.1-136.7 161.2 -12.6 11.0 3.6 16 16 A K H > S+ 0 0 174 -2,-0.3 4,-0.8 1,-0.2 5,-0.1 0.837 116.7 45.2 -73.4 -29.6 -14.5 13.3 5.9 17 17 A V H > S+ 0 0 63 2,-0.2 4,-1.2 3,-0.2 -1,-0.2 0.647 112.4 55.8 -85.9 -13.4 -11.4 15.5 6.5 18 18 A Q H > S+ 0 0 15 2,-0.2 4,-1.3 3,-0.1 -2,-0.2 0.937 114.0 34.1 -81.6 -52.3 -10.8 15.4 2.8 19 19 A L H X S+ 0 0 32 -4,-2.4 4,-1.7 1,-0.2 -2,-0.2 0.693 118.8 56.1 -77.3 -17.0 -14.1 16.7 1.6 20 20 A K H X S+ 0 0 132 -4,-0.8 4,-0.9 -5,-0.3 -1,-0.2 0.901 109.6 42.2 -80.8 -41.3 -14.3 18.9 4.7 21 21 A E H X S+ 0 0 45 -4,-1.2 4,-1.8 2,-0.2 -2,-0.2 0.770 115.0 53.9 -75.9 -22.7 -11.1 20.7 4.1 22 22 A L H X S+ 0 0 0 -4,-1.3 4,-1.3 2,-0.2 5,-0.2 0.969 112.4 39.3 -74.4 -53.8 -11.8 21.0 0.4 23 23 A E H X S+ 0 0 77 -4,-1.7 4,-1.1 1,-0.2 -1,-0.2 0.678 116.6 55.7 -70.2 -15.3 -15.2 22.6 0.7 24 24 A R H X S+ 0 0 121 -4,-0.9 4,-1.5 2,-0.2 -2,-0.2 0.949 109.5 40.1 -82.0 -53.4 -13.9 24.8 3.6 25 25 A E H X>S+ 0 0 34 -4,-1.8 4,-0.7 1,-0.2 5,-0.6 0.735 121.4 47.6 -67.7 -19.3 -10.9 26.4 1.9 26 26 A Y H <5S+ 0 0 50 -4,-1.3 -1,-0.2 -5,-0.2 -2,-0.2 0.783 113.8 44.5 -90.5 -30.1 -13.1 26.7 -1.2 27 27 A A H <5S+ 0 0 67 -4,-1.1 -2,-0.2 -5,-0.2 -3,-0.2 0.599 104.8 65.6 -88.2 -11.3 -16.1 28.2 0.6 28 28 A T H <5S- 0 0 90 -4,-1.5 -1,-0.2 2,-0.0 -2,-0.2 0.910 133.8 -38.5 -75.9 -42.3 -13.9 30.5 2.6 29 29 A N T <5S- 0 0 132 -4,-0.7 -3,-0.1 -5,-0.2 3,-0.1 0.320 86.0 -81.3-145.3 -72.3 -12.8 32.5 -0.4 30 30 A K S >> - 0 0 80 -2,-0.3 4,-4.4 1,-0.1 3,-0.7 -0.281 41.3 -99.2 -72.9 160.5 -2.1 29.6 -1.3 34 34 A K H 3>5S+ 0 0 128 1,-0.3 4,-0.9 2,-0.2 -1,-0.1 0.854 130.0 46.4 -47.5 -37.9 0.6 27.1 -2.2 35 35 A D H 3>5S+ 0 0 99 2,-0.2 4,-1.0 1,-0.2 -1,-0.3 0.831 117.0 44.8 -75.7 -29.0 1.3 26.7 1.4 36 36 A K H <>5S+ 0 0 78 -3,-0.7 4,-1.5 2,-0.2 -2,-0.2 0.909 111.9 48.5 -80.8 -43.8 -2.4 26.4 2.1 37 37 A R H X5S+ 0 0 30 -4,-4.4 4,-1.8 1,-0.2 -1,-0.2 0.783 111.0 55.6 -66.8 -21.3 -3.3 24.0 -0.7 38 38 A R H XX>S+ 0 0 0 -4,-1.5 4,-4.7 2,-0.2 3,-2.3 0.994 112.2 42.9 -64.2 -73.4 -4.7 20.1 2.4 41 41 A S H 3X>S+ 0 0 10 -4,-1.8 5,-2.1 1,-0.3 4,-0.6 0.793 116.6 53.2 -42.4 -30.4 -2.7 17.6 0.4 42 42 A A H 3<5S+ 0 0 67 -4,-2.5 -1,-0.3 3,-0.2 -2,-0.2 0.822 118.7 32.9 -77.1 -30.3 -0.6 17.2 3.5 43 43 A T H <<5S+ 0 0 64 -3,-2.3 -2,-0.2 -4,-1.7 -3,-0.2 0.783 127.3 40.8 -92.0 -32.4 -3.6 16.5 5.6 44 44 A T H <5S- 0 0 7 -4,-4.7 -3,-0.2 -5,-0.2 -2,-0.2 0.517 110.0-128.9 -89.9 -9.0 -5.5 14.8 2.9 45 45 A N T << + 0 0 131 -5,-0.6 -3,-0.2 -4,-0.6 -4,-0.1 0.990 61.1 122.4 58.2 72.4 -2.3 13.0 1.9 46 46 A L S > S+ 0 0 61 1,-0.3 4,-2.7 -11,-0.2 3,-0.8 -0.310 116.1 66.8 69.9 -65.6 -0.6 19.2 -4.3 49 49 A R H 3> S+ 0 0 202 -2,-3.7 4,-1.7 1,-0.3 -1,-0.3 0.823 97.5 57.0 -54.4 -27.3 -1.3 18.9 -7.9 50 50 A Q H 3> S+ 0 0 97 2,-0.2 4,-2.4 3,-0.2 -1,-0.3 0.881 105.4 48.1 -72.0 -38.0 -4.1 16.7 -6.7 51 51 A V H <> S+ 0 0 0 -3,-0.8 4,-3.6 2,-0.3 5,-0.3 0.977 109.9 51.8 -64.9 -51.6 -5.5 19.4 -4.5 52 52 A T H X S+ 0 0 41 -4,-2.7 4,-1.7 1,-0.3 -1,-0.2 0.901 114.5 43.7 -48.1 -42.8 -5.3 21.8 -7.3 53 53 A I H X S+ 0 0 80 -4,-1.7 4,-2.4 -5,-0.3 -1,-0.3 0.825 109.1 58.4 -72.8 -30.9 -7.2 19.1 -9.2 54 54 A W H X S+ 0 0 33 -4,-2.4 4,-3.4 2,-0.2 5,-0.3 0.954 104.3 50.7 -64.6 -44.8 -9.5 18.6 -6.3 55 55 A F H X S+ 0 0 1 -4,-3.6 4,-1.0 1,-0.2 -1,-0.2 0.935 111.5 47.0 -59.1 -45.2 -10.5 22.2 -6.4 56 56 A Q H X S+ 0 0 132 -4,-1.7 4,-0.9 -5,-0.3 -1,-0.2 0.878 114.2 48.8 -64.3 -34.9 -11.3 22.0 -10.1 57 57 A N H >X S+ 0 0 77 -4,-2.4 4,-2.3 1,-0.2 3,-0.6 0.904 106.0 55.3 -70.3 -40.2 -13.2 18.8 -9.5 58 58 A R H 3X S+ 0 0 37 -4,-3.4 4,-1.1 1,-0.3 -1,-0.2 0.759 108.3 50.6 -63.4 -20.3 -15.0 20.4 -6.7 59 59 A R H 3X S+ 0 0 143 -4,-1.0 4,-0.7 -5,-0.3 -1,-0.3 0.701 113.3 44.6 -87.0 -21.9 -16.0 23.0 -9.3 60 60 A V H << S+ 0 0 71 -4,-0.9 -2,-0.2 -3,-0.6 -1,-0.2 0.633 115.4 47.7 -92.3 -20.4 -17.0 20.2 -11.5 61 61 A K H < S+ 0 0 103 -4,-2.3 3,-0.3 2,-0.1 -2,-0.2 0.698 105.1 58.9 -92.5 -23.1 -18.9 18.4 -8.7 62 62 A E H >< S+ 0 0 61 -4,-1.1 3,-3.2 -5,-0.3 -2,-0.1 0.925 94.6 62.0 -72.7 -43.8 -20.7 21.4 -7.4 63 63 A K T 3< S+ 0 0 146 -4,-0.7 -1,-0.2 1,-0.3 -2,-0.1 0.767 88.0 76.7 -53.4 -21.6 -22.5 22.2 -10.7 64 64 A K T 3 S+ 0 0 130 -3,-0.3 3,-0.4 -4,-0.1 -1,-0.3 0.752 92.1 63.4 -61.8 -21.5 -24.0 18.7 -10.1 65 65 A V S < S+ 0 0 85 -3,-3.2 4,-0.0 1,-0.2 -3,-0.0 -0.110 84.9 46.4 -89.6-167.2 -26.3 20.4 -7.5 66 66 A I S S+ 0 0 148 1,-0.2 -1,-0.2 2,-0.1 -2,-0.1 0.759 105.3 76.0 43.4 23.0 -28.9 23.1 -8.0 67 67 A N S S+ 0 0 136 -3,-0.4 -1,-0.2 2,-0.0 4,-0.2 0.267 81.2 58.8-141.7 7.0 -29.9 20.9 -10.9 68 68 A K S S+ 0 0 144 2,-0.1 -2,-0.1 3,-0.1 -3,-0.1 0.094 74.7 96.9-125.3 20.7 -31.7 18.0 -9.2 69 69 A L S S+ 0 0 135 1,-0.1 -1,-0.0 -4,-0.0 -2,-0.0 0.973 94.0 29.9 -75.1 -56.4 -34.5 20.0 -7.5 70 70 A K S S- 0 0 174 1,-0.0 -1,-0.1 2,-0.0 -2,-0.1 0.918 82.6-164.3 -70.3 -42.6 -37.3 19.6 -10.0 71 71 A T + 0 0 65 -4,-0.2 -3,-0.1 1,-0.1 -1,-0.0 0.901 18.2 169.8 59.7 39.7 -36.0 16.2 -11.2 72 72 A T 0 0 125 1,-0.0 -1,-0.1 0, 0.0 -4,-0.0 0.490 360.0 360.0 -62.9 2.9 -38.2 16.4 -14.3 73 73 A S 0 0 159 0, 0.0 -1,-0.0 0, 0.0 0, 0.0 -0.493 360.0 360.0 -62.7 360.0 -36.3 13.4 -15.4