==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 25-MAR-02 1L9L . COMPND 2 MOLECULE: GRANULYSIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR D.H.ANDERSON,M.R.SAWAYA,D.CASCIO,W.ERNST,A.KRENSKY,R.MODLIN, . 74 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5236.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 60 81.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 13 17.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 44 59.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G >> 0 0 96 0, 0.0 4,-0.9 0, 0.0 3,-0.6 0.000 360.0 360.0 360.0 -18.4 -3.7 20.2 19.2 2 2 A R H 3> + 0 0 104 1,-0.2 4,-2.5 2,-0.2 5,-0.3 0.820 360.0 75.7 -66.3 -26.6 -1.8 19.3 16.1 3 3 A D H 3> S+ 0 0 51 1,-0.2 4,-2.7 2,-0.2 -1,-0.2 0.883 92.2 51.4 -56.8 -42.2 0.1 16.6 18.0 4 4 A Y H <> S+ 0 0 43 -3,-0.6 4,-2.3 69,-0.4 -1,-0.2 0.917 112.5 46.4 -59.7 -44.2 -2.8 14.2 18.0 5 5 A R H X S+ 0 0 129 -4,-0.9 4,-2.3 -3,-0.2 -2,-0.2 0.913 111.9 49.5 -65.3 -40.9 -3.3 14.5 14.3 6 6 A T H X S+ 0 0 4 -4,-2.5 4,-2.6 1,-0.2 -1,-0.2 0.924 110.1 53.7 -59.4 -45.3 0.4 14.2 13.5 7 7 A a H X S+ 0 0 2 -4,-2.7 4,-2.6 -5,-0.3 5,-0.2 0.929 108.2 47.7 -56.5 -48.9 0.4 11.1 15.7 8 8 A L H X S+ 0 0 51 -4,-2.3 4,-2.1 1,-0.2 -1,-0.2 0.926 112.6 48.8 -62.6 -41.2 -2.5 9.4 13.9 9 9 A T H X S+ 0 0 53 -4,-2.3 4,-2.3 1,-0.2 -1,-0.2 0.941 112.6 47.8 -63.2 -44.9 -0.9 10.1 10.4 10 10 A I H X S+ 0 0 0 -4,-2.6 4,-2.8 2,-0.2 5,-0.2 0.899 108.6 53.5 -64.0 -42.6 2.5 8.8 11.5 11 11 A V H X S+ 0 0 1 -4,-2.6 4,-2.2 1,-0.2 -1,-0.2 0.942 111.2 47.0 -54.4 -49.8 1.0 5.6 13.0 12 12 A Q H X S+ 0 0 86 -4,-2.1 4,-1.0 -5,-0.2 -1,-0.2 0.914 112.4 49.1 -58.1 -44.8 -0.8 4.9 9.7 13 13 A K H >X S+ 0 0 66 -4,-2.3 4,-1.0 1,-0.2 3,-0.7 0.937 111.8 48.7 -62.1 -46.4 2.3 5.6 7.7 14 14 A L H >X S+ 0 0 1 -4,-2.8 4,-1.6 1,-0.2 3,-0.5 0.871 102.7 60.9 -64.9 -34.6 4.5 3.3 9.8 15 15 A K H 3< S+ 0 0 93 -4,-2.2 -1,-0.2 1,-0.3 -2,-0.2 0.824 109.5 43.2 -64.8 -26.1 2.1 0.4 9.8 16 16 A K H << S+ 0 0 155 -4,-1.0 -1,-0.3 -3,-0.7 -2,-0.2 0.655 108.9 58.6 -88.8 -18.2 2.5 0.2 5.9 17 17 A M H << S+ 0 0 67 -4,-1.0 2,-0.3 -3,-0.5 -2,-0.2 0.767 106.0 50.0 -81.4 -27.0 6.2 0.7 6.0 18 18 A V < - 0 0 22 -4,-1.6 8,-0.0 1,-0.2 7,-0.0 -0.713 63.5-154.2-108.2 160.6 6.9 -2.3 8.1 19 19 A D S S+ 0 0 160 1,-0.4 -1,-0.2 -2,-0.3 -2,-0.1 0.708 87.2 16.6 -91.7 -90.1 5.8 -5.9 7.8 20 20 A K S S- 0 0 153 1,-0.1 2,-0.9 5,-0.0 -1,-0.4 -0.720 89.0-126.4 -75.7 124.4 5.8 -7.4 11.3 21 21 A P + 0 0 46 0, 0.0 2,-0.3 0, 0.0 42,-0.1 -0.642 48.3 150.7 -78.9 104.6 6.0 -4.5 13.9 22 22 A T > - 0 0 53 -2,-0.9 4,-2.7 1,-0.1 5,-0.5 -0.811 62.4 -95.9-125.1 170.6 8.9 -5.2 16.1 23 23 A Q H > S+ 0 0 120 -2,-0.3 4,-1.9 1,-0.2 5,-0.2 0.927 125.4 40.5 -51.8 -45.9 11.3 -3.0 18.1 24 24 A R H > S+ 0 0 193 2,-0.2 4,-2.3 1,-0.2 5,-0.2 0.930 116.6 45.4 -69.3 -48.8 13.8 -3.1 15.2 25 25 A S H > S+ 0 0 33 1,-0.2 4,-2.2 2,-0.2 -2,-0.2 0.934 117.9 43.7 -64.8 -44.4 11.5 -2.9 12.2 26 26 A V H X S+ 0 0 1 -4,-2.7 4,-2.3 2,-0.2 -1,-0.2 0.905 112.9 51.1 -67.0 -43.7 9.4 -0.1 13.6 27 27 A S H X S+ 0 0 34 -4,-1.9 4,-1.2 -5,-0.5 -1,-0.2 0.926 110.3 49.9 -61.6 -41.6 12.4 1.9 14.9 28 28 A N H >X S+ 0 0 79 -4,-2.3 4,-0.5 1,-0.2 3,-0.5 0.942 112.2 47.2 -62.8 -43.2 14.1 1.6 11.4 29 29 A A H >X S+ 0 0 0 -4,-2.2 4,-1.8 1,-0.2 3,-1.4 0.892 105.8 61.2 -63.5 -35.4 10.9 2.8 9.7 30 30 A A H 3< S+ 0 0 16 -4,-2.3 4,-0.5 1,-0.3 -1,-0.2 0.781 98.0 55.8 -66.1 -27.0 10.7 5.6 12.2 31 31 A T H << S+ 0 0 95 -4,-1.2 -1,-0.3 -3,-0.5 -2,-0.2 0.678 116.3 38.6 -74.1 -18.4 14.0 7.1 11.2 32 32 A R H X< S+ 0 0 129 -3,-1.4 3,-2.1 -4,-0.5 -2,-0.2 0.682 92.6 82.4-101.5 -26.8 12.7 7.3 7.5 33 33 A V G >< S+ 0 0 5 -4,-1.8 3,-1.3 1,-0.3 -3,-0.1 0.854 88.5 52.6 -58.8 -37.8 9.0 8.4 7.8 34 34 A b G 3 S+ 0 0 14 -4,-0.5 -1,-0.3 1,-0.2 12,-0.2 0.493 94.6 72.3 -78.3 -0.4 9.6 12.1 8.2 35 35 A R G < S+ 0 0 190 -3,-2.1 2,-0.5 10,-0.1 -1,-0.2 0.432 81.0 83.0 -91.7 0.2 11.8 12.3 5.0 36 36 A T S < S+ 0 0 102 -3,-1.3 2,-0.2 -4,-0.2 -1,-0.0 -0.939 80.1 33.7-108.5 122.9 8.8 11.8 2.7 37 37 A G S S- 0 0 44 -2,-0.5 2,-0.1 4,-0.1 -3,-0.0 -0.736 93.2 -47.6 131.3 177.7 6.7 15.0 1.9 38 38 A R > - 0 0 220 -2,-0.2 4,-2.5 1,-0.1 3,-0.3 -0.353 67.4 -92.4 -76.1 169.1 7.0 18.7 1.4 39 39 A S H > S+ 0 0 72 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.848 120.7 56.1 -59.2 -39.5 9.0 20.8 3.8 40 40 A R H > S+ 0 0 179 1,-0.2 4,-2.5 2,-0.2 -1,-0.2 0.954 112.8 41.8 -57.9 -51.6 6.2 21.8 6.2 41 41 A W H > S+ 0 0 56 -3,-0.3 4,-3.0 1,-0.2 5,-0.3 0.906 110.9 56.2 -63.8 -42.8 5.2 18.1 6.8 42 42 A R H X S+ 0 0 86 -4,-2.5 4,-2.6 1,-0.2 -1,-0.2 0.928 111.6 45.0 -54.1 -42.3 8.8 17.0 7.1 43 43 A D H X S+ 0 0 79 -4,-2.4 4,-2.6 -5,-0.2 5,-0.3 0.931 113.5 47.2 -66.6 -52.2 9.2 19.6 9.9 44 44 A V H X S+ 0 0 32 -4,-2.5 4,-2.1 -5,-0.2 -1,-0.2 0.941 115.3 47.4 -54.8 -44.9 6.0 18.8 11.7 45 45 A b H X S+ 0 0 0 -4,-3.0 4,-2.7 1,-0.2 5,-0.2 0.944 112.2 48.7 -61.3 -49.8 6.8 15.1 11.6 46 46 A R H X S+ 0 0 114 -4,-2.6 4,-2.3 -5,-0.3 -1,-0.2 0.925 111.3 48.6 -60.3 -45.3 10.3 15.4 12.7 47 47 A N H X S+ 0 0 61 -4,-2.6 4,-1.1 1,-0.2 -1,-0.2 0.899 112.3 50.1 -63.9 -38.4 9.5 17.6 15.7 48 48 A F H >X S+ 0 0 2 -4,-2.1 4,-2.7 -5,-0.3 3,-0.5 0.936 109.8 49.0 -61.6 -52.1 6.8 15.3 16.7 49 49 A M H 3X S+ 0 0 15 -4,-2.7 4,-2.4 1,-0.2 5,-0.2 0.889 104.9 58.9 -62.1 -35.8 9.0 12.2 16.6 50 50 A R H 3< S+ 0 0 220 -4,-2.3 -1,-0.2 -5,-0.2 -2,-0.2 0.861 116.7 34.3 -58.7 -34.8 11.7 13.9 18.6 51 51 A R H << S+ 0 0 165 -4,-1.1 -2,-0.2 -3,-0.5 -1,-0.2 0.852 134.6 20.4 -81.0 -41.1 9.1 14.4 21.4 52 52 A Y H >X S+ 0 0 68 -4,-2.7 4,-1.7 -5,-0.1 3,-1.0 0.394 79.1 112.3-120.1 -1.5 7.0 11.2 21.1 53 53 A Q H 3X S+ 0 0 98 -4,-2.4 4,-2.8 1,-0.3 5,-0.3 0.809 77.0 59.3 -50.7 -39.9 8.9 8.4 19.2 54 54 A S H 3> S+ 0 0 84 1,-0.2 4,-2.2 -5,-0.2 -1,-0.3 0.907 108.9 43.3 -59.2 -43.1 9.2 6.2 22.3 55 55 A R H <> S+ 0 0 59 -3,-1.0 4,-2.3 2,-0.2 -1,-0.2 0.873 113.2 51.6 -71.0 -38.5 5.5 6.0 22.8 56 56 A V H X S+ 0 0 2 -4,-1.7 4,-2.3 2,-0.2 5,-0.2 0.943 112.6 45.2 -61.2 -49.0 4.7 5.5 19.1 57 57 A I H X S+ 0 0 13 -4,-2.8 4,-2.5 2,-0.2 5,-0.2 0.947 112.6 51.7 -61.9 -46.6 7.2 2.6 18.8 58 58 A Q H X S+ 0 0 115 -4,-2.2 4,-1.9 -5,-0.3 -1,-0.2 0.908 111.2 48.8 -53.1 -46.7 5.9 1.0 22.0 59 59 A G H <>S+ 0 0 0 -4,-2.3 5,-2.4 2,-0.2 4,-0.3 0.897 109.9 48.9 -66.0 -43.6 2.4 1.2 20.7 60 60 A L H ><5S+ 0 0 2 -4,-2.3 3,-1.5 1,-0.2 -1,-0.2 0.919 111.4 50.4 -62.1 -43.9 3.2 -0.3 17.3 61 61 A V H 3<5S+ 0 0 62 -4,-2.5 -2,-0.2 1,-0.3 -1,-0.2 0.884 108.7 53.0 -61.7 -33.7 5.1 -3.2 19.0 62 62 A A T 3<5S- 0 0 65 -4,-1.9 -1,-0.3 -5,-0.2 -2,-0.2 0.446 113.9-119.2 -77.4 -6.9 2.1 -3.8 21.3 63 63 A G T < 5 + 0 0 55 -3,-1.5 -3,-0.2 -4,-0.3 -2,-0.1 0.763 54.9 166.2 69.3 29.4 -0.3 -4.0 18.3 64 64 A E < - 0 0 45 -5,-2.4 -1,-0.2 -6,-0.2 2,-0.1 -0.314 39.7-109.8 -70.1 152.8 -2.3 -1.0 19.5 65 65 A T > - 0 0 63 1,-0.1 4,-2.5 -2,-0.0 5,-0.2 -0.395 34.9-105.0 -70.5 161.7 -4.8 0.8 17.3 66 66 A A H > S+ 0 0 24 1,-0.2 4,-2.2 2,-0.2 5,-0.1 0.918 123.2 51.9 -54.9 -44.0 -3.8 4.3 16.1 67 67 A Q H > S+ 0 0 114 1,-0.2 4,-0.8 2,-0.2 -1,-0.2 0.916 109.0 49.2 -62.6 -39.7 -6.3 5.8 18.6 68 68 A Q H >4 S+ 0 0 109 1,-0.2 3,-0.6 2,-0.2 4,-0.3 0.906 112.3 48.4 -63.7 -45.1 -4.8 3.8 21.5 69 69 A I H 3< S+ 0 0 5 -4,-2.5 3,-0.3 1,-0.2 -1,-0.2 0.891 119.9 37.9 -59.3 -44.5 -1.3 4.8 20.6 70 70 A a H >< S+ 0 0 2 -4,-2.2 3,-2.0 -5,-0.2 4,-0.4 0.401 83.5 109.2 -92.7 2.0 -2.2 8.5 20.4 71 71 A E G X< + 0 0 81 -4,-0.8 3,-1.5 -3,-0.6 -1,-0.2 0.790 69.0 61.4 -56.1 -37.7 -4.7 8.7 23.3 72 72 A D G 3 S+ 0 0 139 -3,-0.3 -1,-0.3 -4,-0.3 -2,-0.1 0.767 108.0 47.6 -63.2 -19.9 -2.7 10.8 25.7 73 73 A L G < 0 0 44 -3,-2.0 -69,-0.4 -70,-0.1 -1,-0.3 0.473 360.0 360.0 -92.4 -9.4 -2.7 13.6 23.1 74 74 A R < 0 0 195 -3,-1.5 -3,-0.0 -4,-0.4 -71,-0.0 -0.380 360.0 360.0 -68.2 360.0 -6.3 13.5 22.3