==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-DEC-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 29-JAN-11 2L92 . COMPND 2 MOLECULE: HISTONE FAMILY PROTEIN NUCLEOID-STRUCTURING PROTE . SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA VIETNAMIENSIS; . AUTHOR Y.LI,B.XIA . 44 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4255.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 13 29.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 11.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 71 A M 0 0 219 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 124.4 -4.5 7.2 7.0 2 72 A S + 0 0 122 1,-0.0 2,-0.3 0, 0.0 0, 0.0 0.341 360.0 50.4-136.4 1.0 -5.9 10.5 5.5 3 73 A T - 0 0 72 0, 0.0 -1,-0.0 0, 0.0 14,-0.0 -0.879 57.8-154.3-139.3 165.9 -7.9 9.4 2.3 4 74 A V - 0 0 104 -2,-0.3 12,-0.0 13,-0.2 0, 0.0 -0.994 32.8 -89.6-144.0 143.3 -10.6 6.9 1.3 5 75 A P + 0 0 60 0, 0.0 12,-0.3 0, 0.0 3,-0.1 -0.079 31.1 178.9 -47.5 151.6 -11.6 5.2 -2.0 6 76 A K + 0 0 100 10,-3.0 29,-2.8 1,-0.3 2,-0.3 0.607 65.1 29.1-127.2 -30.9 -14.2 6.8 -4.4 7 77 A Y E -AB 16 34A 31 9,-2.6 9,-2.2 27,-0.3 -1,-0.3 -0.958 53.9-168.5-137.7 150.7 -14.4 4.3 -7.4 8 78 A R E -A 15 0A 152 25,-2.8 7,-0.2 -2,-0.3 6,-0.1 -0.915 23.6-130.7-145.1 116.2 -14.0 0.5 -8.0 9 79 A D > - 0 0 21 5,-2.4 4,-2.3 -2,-0.3 3,-0.5 -0.457 11.0-155.5 -63.8 119.1 -13.7 -1.2 -11.5 10 80 A P T 4 S+ 0 0 112 0, 0.0 -1,-0.1 0, 0.0 23,-0.0 0.721 88.3 60.7 -72.0 -21.0 -16.2 -4.2 -11.7 11 81 A A T 4 S+ 0 0 88 1,-0.1 -2,-0.0 3,-0.1 0, 0.0 0.811 128.3 4.8 -75.8 -30.9 -14.1 -6.0 -14.4 12 82 A T T 4 S- 0 0 94 -3,-0.5 -1,-0.1 2,-0.1 -3,-0.0 0.513 94.0-115.1-131.9 -17.1 -10.8 -6.4 -12.4 13 83 A G < + 0 0 29 -4,-2.3 -2,-0.0 1,-0.3 0, 0.0 0.365 60.9 151.7 89.2 -2.1 -11.6 -5.1 -8.8 14 84 A K - 0 0 133 -5,-0.1 -5,-2.4 -6,-0.1 2,-0.3 -0.236 29.3-148.9 -60.7 149.2 -9.1 -2.1 -9.1 15 85 A T E -A 8 0A 79 -7,-0.2 2,-0.3 -9,-0.0 -7,-0.2 -0.808 17.0-176.7-123.7 157.7 -9.8 1.1 -7.0 16 86 A W E -A 7 0A 39 -9,-2.2 -10,-3.0 -2,-0.3 -9,-2.6 -0.970 16.1-152.4-149.5 163.6 -9.2 4.9 -7.1 17 87 A S - 0 0 41 2,-0.3 -13,-0.2 -12,-0.3 3,-0.1 0.163 50.6 -96.9-129.8 14.7 -9.9 7.9 -4.7 18 88 A G S S+ 0 0 36 1,-0.2 2,-0.3 3,-0.1 4,-0.1 0.642 93.4 99.0 79.6 13.3 -10.5 11.1 -6.8 19 89 A R + 0 0 186 2,-0.1 -2,-0.3 0, 0.0 -1,-0.2 -0.935 68.8 6.8-135.7 154.7 -6.8 12.2 -6.4 20 90 A G S S- 0 0 74 -2,-0.3 2,-0.2 -3,-0.1 -2,-0.0 -0.195 113.4 -6.2 65.8-166.5 -3.6 12.1 -8.5 21 91 A R S S- 0 0 237 1,-0.1 -2,-0.1 -3,-0.0 -3,-0.1 -0.401 80.7-118.2 -58.6 127.5 -3.5 10.9 -12.2 22 92 A Q - 0 0 107 -2,-0.2 -1,-0.1 1,-0.1 -2,-0.1 -0.453 29.3-110.7 -69.0 136.3 -6.9 9.5 -13.2 23 93 A P - 0 0 28 0, 0.0 4,-0.5 0, 0.0 3,-0.3 -0.226 18.9-120.3 -60.4 157.7 -7.1 5.7 -14.2 24 94 A A S > S+ 0 0 102 1,-0.2 3,-1.3 2,-0.2 -2,-0.0 0.907 113.0 56.4 -65.7 -42.0 -7.8 4.6 -17.9 25 95 A W T 3 S+ 0 0 57 1,-0.3 4,-0.4 2,-0.1 3,-0.2 0.760 97.8 64.5 -63.2 -24.5 -11.0 2.7 -16.9 26 96 A L T 3 S+ 0 0 1 -3,-0.3 2,-1.7 1,-0.2 -1,-0.3 0.774 81.9 84.1 -64.3 -28.5 -12.4 6.0 -15.4 27 97 A G S < S+ 0 0 60 -3,-1.3 -1,-0.2 -4,-0.5 -2,-0.1 -0.223 87.0 47.8 -81.2 45.4 -12.4 7.7 -18.9 28 98 A N S S- 0 0 149 -2,-1.7 -1,-0.2 -3,-0.2 -2,-0.1 0.412 124.5 -11.5-142.6 -59.6 -15.8 6.4 -20.1 29 99 A D > - 0 0 85 -4,-0.4 3,-2.4 -3,-0.1 4,-0.3 -0.597 53.3-167.0-155.9 81.9 -18.8 6.7 -17.6 30 100 A P G > S+ 0 0 58 0, 0.0 3,-0.9 0, 0.0 4,-0.3 0.744 85.8 62.5 -46.2 -33.8 -17.8 7.7 -14.0 31 101 A A G 3 S+ 0 0 78 1,-0.2 3,-0.5 2,-0.2 0, 0.0 0.727 89.6 70.2 -64.6 -24.1 -21.3 6.9 -12.6 32 102 A A G < S+ 0 0 72 -3,-2.4 -1,-0.2 1,-0.2 0, 0.0 0.738 111.9 24.1 -68.2 -26.1 -21.0 3.2 -13.6 33 103 A F S < S+ 0 0 21 -3,-0.9 -25,-2.8 -4,-0.3 -1,-0.2 0.080 83.2 136.9-135.3 17.5 -18.3 2.2 -10.9 34 104 A L B -B 7 0A 67 -3,-0.5 2,-0.3 -4,-0.3 -27,-0.3 -0.463 56.5-118.4 -61.4 140.8 -18.6 4.9 -8.1 35 105 A I - 0 0 80 -29,-2.8 -1,-0.1 -2,-0.1 -2,-0.1 -0.685 38.9-173.5 -79.6 135.6 -18.4 3.5 -4.5 36 106 A Q - 0 0 153 -2,-0.3 2,-2.2 -29,-0.0 3,-0.2 -0.924 38.2 -99.7-133.6 154.9 -21.7 4.1 -2.5 37 107 A P + 0 0 120 0, 0.0 4,-0.1 0, 0.0 -2,-0.0 -0.395 48.7 162.5 -75.9 64.9 -23.0 3.7 1.1 38 108 A D S S+ 0 0 149 -2,-2.2 -3,-0.0 2,-0.1 0, 0.0 0.738 74.1 25.6 -55.6 -24.6 -24.9 0.4 0.4 39 109 A L S S- 0 0 111 -3,-0.2 4,-0.1 4,-0.0 -1,-0.0 -0.938 108.5 -77.1-133.8 155.7 -24.9 -0.1 4.2 40 110 A P - 0 0 87 0, 0.0 2,-0.5 0, 0.0 3,-0.1 -0.169 33.3-123.6 -53.2 145.3 -24.7 2.5 7.1 41 111 A A S S+ 0 0 106 1,-0.2 0, 0.0 -4,-0.1 0, 0.0 -0.013 102.1 76.0 -78.6 31.5 -21.3 4.2 8.0 42 112 A I S S+ 0 0 160 -2,-0.5 2,-0.3 2,-0.0 -1,-0.2 -0.474 75.2 101.6-141.7 54.2 -21.8 2.8 11.6 43 113 A L 0 0 126 -3,-0.1 -4,-0.0 -4,-0.1 0, 0.0 -0.991 360.0 360.0-148.4 144.2 -21.0 -0.9 11.1 44 114 A E 0 0 249 -2,-0.3 -1,-0.1 0, 0.0 -3,-0.0 0.404 360.0 360.0-147.2 360.0 -18.0 -3.2 11.7