==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-DEC-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 29-JAN-11 2L93 . COMPND 2 MOLECULE: DNA-BINDING PROTEIN H-NS; . SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM; . AUTHOR Y.LI . 49 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4500.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 23 46.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 16.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 4.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 16.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 91 A A 0 0 165 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 155.4 2.7 -4.5 -9.0 2 92 A A - 0 0 92 2,-0.0 0, 0.0 0, 0.0 0, 0.0 -0.937 360.0-150.9-148.5 169.1 6.3 -5.7 -7.9 3 93 A R + 0 0 233 -2,-0.3 2,-1.3 1,-0.0 3,-0.1 -0.402 24.7 161.9-142.6 58.5 9.3 -4.9 -5.6 4 94 A P - 0 0 81 0, 0.0 41,-0.0 0, 0.0 -1,-0.0 -0.050 56.6-109.8 -76.6 36.5 12.5 -6.2 -7.3 5 95 A A - 0 0 23 -2,-1.3 15,-0.2 1,-0.1 3,-0.1 0.021 16.5-120.5 52.1-170.2 14.7 -3.9 -5.0 6 96 A K S S+ 0 0 67 13,-2.6 39,-2.4 1,-0.4 40,-0.7 0.559 83.0 29.7-134.9 -31.1 16.7 -0.8 -6.3 7 97 A Y E -AB 19 44A 19 12,-2.7 12,-2.4 37,-0.3 -1,-0.4 -0.924 57.4-163.9-135.5 157.7 20.4 -1.5 -5.5 8 98 A S E -A 18 0A 11 35,-2.4 2,-0.2 -2,-0.3 10,-0.2 -0.994 10.9-179.5-143.0 142.7 22.7 -4.5 -5.1 9 99 A Y E -A 17 0A 30 8,-2.6 7,-3.0 -2,-0.3 8,-1.6 -0.857 13.1-133.8-142.3 172.4 26.2 -5.0 -3.5 10 100 A V E -A 15 0A 72 5,-0.3 5,-0.2 -2,-0.2 18,-0.0 -0.598 15.0-174.8-121.2 173.6 29.0 -7.5 -2.8 11 101 A D S S- 0 0 132 3,-0.9 -1,-0.1 -2,-0.2 4,-0.1 0.449 75.5 -46.7-138.5 -47.8 31.4 -8.7 0.0 12 102 A E S S+ 0 0 181 2,-0.4 3,-0.1 0, 0.0 -2,-0.0 0.328 126.3 42.5-151.1 -60.2 33.8 -11.3 -1.5 13 103 A N S S- 0 0 147 1,-0.2 2,-0.3 2,-0.0 -3,-0.0 0.631 116.1 -72.5 -78.2 -18.2 32.3 -14.1 -3.8 14 104 A G S S+ 0 0 31 -5,-0.0 -3,-0.9 0, 0.0 -2,-0.4 -0.975 93.1 3.1 155.8-164.6 29.8 -12.0 -5.8 15 105 A E E +A 10 0A 150 -2,-0.3 -5,-0.3 -5,-0.2 3,-0.1 -0.373 60.8 168.2 -51.4 125.9 26.5 -10.2 -5.3 16 106 A T E + 0 0 68 -7,-3.0 2,-0.3 1,-0.4 -6,-0.2 0.766 51.5 4.0-117.6 -41.6 25.6 -10.7 -1.6 17 107 A K E -A 9 0A 134 -8,-1.6 -8,-2.6 2,-0.0 -1,-0.4 -0.949 55.8-144.0-151.2 163.3 22.7 -8.4 -0.7 18 108 A T E -A 8 0A 87 -2,-0.3 2,-0.3 -10,-0.2 -10,-0.3 -0.831 9.2-162.5-132.1 163.4 20.1 -5.8 -2.1 19 109 A W E -A 7 0A 35 -12,-2.4 -12,-2.7 -2,-0.3 -13,-2.6 -0.971 19.7-154.1-149.4 158.3 18.4 -2.6 -0.9 20 110 A T - 0 0 75 -2,-0.3 3,-0.1 2,-0.2 -1,-0.1 0.516 55.3-102.3-109.3 -14.9 15.4 -0.3 -1.8 21 111 A G S S+ 0 0 38 1,-0.4 2,-0.2 3,-0.1 4,-0.1 0.195 82.4 128.9 98.5 -11.0 16.6 3.1 -0.5 22 112 A Q - 0 0 165 2,-0.1 -1,-0.4 3,-0.0 -2,-0.2 -0.547 63.7 -13.4 -76.6 140.7 14.3 2.8 2.7 23 113 A G S S+ 0 0 64 -2,-0.2 2,-0.1 -3,-0.1 0, 0.0 -0.154 112.7 0.8 70.3-164.9 15.9 3.3 6.2 24 114 A R S S- 0 0 229 1,-0.1 -3,-0.1 0, 0.0 3,-0.1 -0.345 83.4-102.5 -58.3 132.6 19.6 3.5 7.2 25 115 A T - 0 0 55 1,-0.1 -1,-0.1 -2,-0.1 -2,-0.1 -0.338 43.1-103.5 -56.8 129.3 22.1 3.1 4.3 26 116 A P > - 0 0 19 0, 0.0 4,-2.9 0, 0.0 5,-0.2 -0.237 30.4-113.8 -55.6 146.1 23.8 -0.4 4.1 27 117 A A H > S+ 0 0 73 1,-0.2 4,-2.8 2,-0.2 5,-0.2 0.863 114.7 46.3 -55.3 -44.7 27.4 -0.6 5.4 28 118 A V H > S+ 0 0 50 2,-0.2 4,-2.5 1,-0.2 -1,-0.2 0.919 114.4 48.1 -66.4 -41.5 29.0 -1.4 2.0 29 119 A I H > S+ 0 0 0 2,-0.2 4,-2.3 1,-0.2 -2,-0.2 0.942 113.4 48.9 -62.3 -45.5 27.0 1.4 0.2 30 120 A K H X S+ 0 0 86 -4,-2.9 4,-2.3 2,-0.2 5,-0.2 0.941 112.9 46.4 -57.9 -50.9 28.0 3.8 3.0 31 121 A K H X>S+ 0 0 108 -4,-2.8 4,-2.9 2,-0.2 5,-0.8 0.876 110.9 52.7 -65.1 -36.4 31.7 2.9 2.8 32 122 A A H X5S+ 0 0 5 -4,-2.5 6,-2.3 3,-0.2 4,-0.9 0.923 112.6 45.3 -62.8 -43.2 31.6 3.1 -1.0 33 123 A M H <5S+ 0 0 80 -4,-2.3 -2,-0.2 4,-0.2 -1,-0.2 0.887 124.8 31.8 -65.0 -40.5 30.1 6.7 -0.8 34 124 A E H <5S+ 0 0 134 -4,-2.3 -2,-0.2 -5,-0.2 -3,-0.2 0.798 131.7 26.4 -94.9 -31.3 32.6 7.9 2.0 35 125 A E H <5S+ 0 0 140 -4,-2.9 -3,-0.2 -5,-0.2 -2,-0.1 0.612 132.3 33.8-111.9 -16.2 35.9 6.0 1.3 36 126 A Q S < - 0 0 137 1,-0.0 3,-2.0 -7,-0.0 4,-0.2 -0.839 34.0 -98.7-124.2 164.5 27.3 7.3 -5.9 40 130 A L G >> S+ 0 0 41 1,-0.3 3,-2.1 -2,-0.3 4,-1.4 0.738 112.4 75.7 -60.9 -25.9 24.3 4.9 -5.8 41 131 A E G 34 S+ 0 0 141 1,-0.3 -1,-0.3 2,-0.2 -3,-0.0 0.743 83.9 66.2 -58.9 -23.1 24.4 4.4 -9.6 42 132 A D G <4 S+ 0 0 96 -3,-2.0 -1,-0.3 1,-0.2 -2,-0.2 0.706 116.0 28.5 -67.4 -17.2 27.4 2.1 -9.1 43 133 A F T <4 S+ 0 0 22 -3,-2.1 -35,-2.4 -4,-0.2 -2,-0.2 0.475 93.5 122.1-120.7 -14.1 25.0 -0.3 -7.2 44 134 A L B < +B 7 0A 51 -4,-1.4 -37,-0.3 -37,-0.2 4,-0.1 -0.284 29.3 173.7 -57.6 137.3 21.7 0.6 -9.0 45 135 A I + 0 0 77 -39,-2.4 -38,-0.2 2,-0.1 -1,-0.1 0.473 68.3 15.3-123.5 -10.7 19.8 -2.3 -10.7 46 136 A K S S- 0 0 147 -40,-0.7 2,-0.3 1,-0.2 -40,-0.1 0.615 112.0 -20.1-134.6 -72.4 16.4 -0.9 -11.9 47 137 A E + 0 0 127 -41,-0.1 -1,-0.2 2,-0.0 -2,-0.1 -0.983 33.1 173.4-157.9 141.0 15.6 2.9 -12.2 48 138 A L 0 0 87 -2,-0.3 -7,-0.1 -4,-0.1 -1,-0.0 -0.039 360.0 360.0-141.5 27.3 16.9 6.2 -10.8 49 139 A E 0 0 224 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 -0.406 360.0 360.0 -58.9 360.0 14.9 8.9 -12.7