==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-SEP-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN, TRANSCRIPTION 12-FEB-11 2L9J . COMPND 2 MOLECULE: MATRIX PROTEIN 2-1; . SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN RESPIRATORY SYNCYTIAL VIRUS; . AUTHOR V.DUBOSCLARD,M.BLONDOT,F.BONTEMS,J.ELEOUET,C.SIZUN . 119 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 9074.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 89 74.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 4.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 18 15.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 64 53.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 2 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 59 A E 0 0 237 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 147.3 14.9 32.4 4.2 2 60 A I - 0 0 150 2,-0.0 2,-0.0 0, 0.0 0, 0.0 -0.871 360.0-151.6-149.2-179.7 17.3 30.4 1.9 3 61 A S - 0 0 104 -2,-0.3 2,-2.9 3,-0.0 3,-0.1 -0.394 6.0-173.4-162.8 74.8 17.8 27.1 0.2 4 62 A G - 0 0 69 1,-0.1 -2,-0.0 -2,-0.0 0, 0.0 -0.380 58.6 -89.5 -72.8 68.5 21.4 26.1 -0.6 5 63 A A S S- 0 0 85 -2,-2.9 2,-0.6 1,-0.1 -1,-0.1 0.167 77.0 -35.7 48.7-177.5 20.3 23.0 -2.5 6 64 A A - 0 0 80 1,-0.1 -1,-0.1 -3,-0.1 -3,-0.0 -0.638 63.1-163.1 -78.0 117.5 19.9 19.7 -0.6 7 65 A E - 0 0 162 -2,-0.6 -1,-0.1 3,-0.0 -2,-0.0 0.787 66.4 -24.9 -65.5-115.7 22.5 19.4 2.2 8 66 A L + 0 0 141 1,-0.1 3,-0.2 2,-0.1 -2,-0.1 0.994 69.2 165.3 -64.8 -64.3 23.1 16.0 3.6 9 67 A D - 0 0 112 1,-0.2 2,-3.4 0, 0.0 -1,-0.1 0.875 13.6-178.1 46.7 42.4 19.7 14.4 2.7 10 68 A R + 0 0 195 1,-0.1 2,-0.9 2,-0.0 -1,-0.2 -0.312 5.0 179.9 -70.4 63.5 21.3 11.0 3.4 11 69 A T - 0 0 82 -2,-3.4 -1,-0.1 -3,-0.2 0, 0.0 -0.568 10.7-175.6 -72.2 104.7 18.1 9.3 2.5 12 70 A E S S- 0 0 167 -2,-0.9 -1,-0.2 1,-0.1 -2,-0.0 0.979 72.4 -35.3 -64.5 -57.5 18.8 5.6 2.9 13 71 A E S > S- 0 0 110 3,-0.0 3,-0.8 0, 0.0 -1,-0.1 -0.275 95.2 -67.9-170.3 72.3 15.5 4.3 1.6 14 72 A Y T 3 S- 0 0 193 1,-0.2 -3,-0.1 3,-0.0 0, 0.0 0.733 87.4 -83.8 47.2 21.7 12.5 6.3 2.4 15 73 A A T 3 S- 0 0 79 2,-0.1 -1,-0.2 3,-0.0 -4,-0.0 0.955 76.8 -69.9 46.0 69.4 13.2 5.2 6.0 16 74 A L < - 0 0 115 -3,-0.8 -3,-0.0 1,-0.2 -4,-0.0 0.140 48.2-113.1 43.5-168.7 11.4 1.9 5.7 17 75 A G S > S+ 0 0 38 2,-0.1 4,-2.5 3,-0.1 5,-0.2 0.299 82.3 108.9-139.2 0.8 7.6 1.9 5.5 18 76 A V H > S+ 0 0 31 1,-0.3 4,-1.1 2,-0.2 3,-0.2 0.920 93.5 34.5 -46.6 -52.1 6.6 0.3 8.8 19 77 A V H > S+ 0 0 55 1,-0.2 4,-2.9 2,-0.2 -1,-0.3 0.833 111.3 64.8 -73.0 -33.4 5.3 3.6 10.0 20 78 A G H > S+ 0 0 38 1,-0.2 4,-1.8 2,-0.2 -2,-0.2 0.858 100.1 51.9 -58.2 -37.5 4.1 4.6 6.5 21 79 A V H X S+ 0 0 44 -4,-2.5 4,-2.3 2,-0.2 -1,-0.2 0.942 111.9 45.0 -65.7 -47.9 1.6 1.8 6.5 22 80 A L H X>S+ 0 0 0 -4,-1.1 4,-3.0 -5,-0.2 5,-0.5 0.943 110.5 53.7 -61.0 -49.3 0.1 2.9 9.9 23 81 A E H X5S+ 0 0 79 -4,-2.9 4,-1.1 1,-0.2 6,-0.3 0.877 111.3 47.0 -53.5 -39.8 0.0 6.5 8.9 24 82 A S H X>S+ 0 0 15 -4,-1.8 6,-1.1 -5,-0.2 4,-0.7 0.898 114.5 47.0 -70.0 -40.5 -1.9 5.6 5.8 25 83 A Y H ><5S+ 0 0 46 -4,-2.3 3,-1.4 2,-0.2 -2,-0.2 0.990 121.5 33.8 -63.8 -61.7 -4.3 3.4 7.7 26 84 A I H 3<5S+ 0 0 21 -4,-3.0 -1,-0.2 1,-0.3 -2,-0.2 0.712 112.6 65.9 -67.1 -19.2 -5.1 5.8 10.5 27 85 A G H 3<> - 0 0 84 -2,-0.3 4,-1.8 1,-0.1 3,-0.7 -0.573 15.5-125.4 -80.4 140.1 -5.8 -3.7 5.7 34 92 A K H 3> S+ 0 0 50 1,-0.3 4,-2.9 -2,-0.3 5,-0.2 0.824 112.3 60.2 -52.1 -32.3 -5.8 -4.1 9.4 35 93 A Q H 3> S+ 0 0 96 1,-0.2 4,-2.3 2,-0.2 5,-0.3 0.924 105.2 45.5 -62.7 -45.5 -3.5 -7.1 8.8 36 94 A S H <> S+ 0 0 57 -3,-0.7 4,-1.3 1,-0.2 -1,-0.2 0.795 114.7 50.2 -68.4 -28.3 -0.9 -4.9 7.2 37 95 A A H X S+ 0 0 2 -4,-1.8 4,-2.5 2,-0.2 -2,-0.2 0.912 112.1 44.8 -75.9 -45.1 -1.2 -2.4 10.0 38 96 A C H X S+ 0 0 3 -4,-2.9 4,-1.7 2,-0.2 -2,-0.2 0.957 113.9 48.1 -64.6 -52.1 -0.9 -4.8 12.8 39 97 A V H X S+ 0 0 66 -4,-2.3 4,-1.0 -5,-0.2 3,-0.2 0.912 113.1 50.1 -55.3 -43.4 2.1 -6.7 11.4 40 98 A A H >X S+ 0 0 6 -4,-1.3 3,-1.3 -5,-0.3 4,-1.2 0.949 105.7 54.5 -59.9 -50.7 3.8 -3.4 10.7 41 99 A M H 3X S+ 0 0 2 -4,-2.5 4,-1.8 1,-0.3 3,-0.3 0.827 99.7 64.6 -52.7 -33.5 3.2 -2.1 14.2 42 100 A S H 3X S+ 0 0 21 -4,-1.7 4,-0.9 1,-0.3 -1,-0.3 0.874 102.4 46.1 -59.8 -38.2 5.0 -5.3 15.4 43 101 A K H << S+ 0 0 131 -3,-1.3 4,-0.3 -4,-1.0 -1,-0.3 0.725 107.5 61.8 -75.1 -21.6 8.2 -4.2 13.8 44 102 A L H >X S+ 0 0 3 -4,-1.2 3,-1.7 -3,-0.3 4,-1.2 0.901 96.8 55.0 -69.9 -44.7 7.6 -0.8 15.3 45 103 A L H 3< S+ 0 0 5 -4,-1.8 -1,-0.2 1,-0.3 -2,-0.2 0.871 88.2 78.2 -58.2 -38.2 7.7 -2.1 18.9 46 104 A T T 3< S+ 0 0 112 -4,-0.9 -1,-0.3 1,-0.2 -2,-0.2 0.772 102.4 40.6 -42.3 -28.2 11.2 -3.6 18.2 47 105 A E T <4 S+ 0 0 95 -3,-1.7 2,-0.8 -4,-0.3 -1,-0.2 0.893 104.7 68.5 -88.2 -48.0 12.3 0.0 18.7 48 106 A L S < S- 0 0 2 -4,-1.2 2,-0.2 4,-0.0 -1,-0.1 -0.651 74.3-160.6 -78.9 109.6 10.1 1.1 21.6 49 107 A N > - 0 0 79 -2,-0.8 4,-1.3 1,-0.1 3,-0.3 -0.616 23.8-125.1 -90.6 150.2 11.3 -0.8 24.7 50 108 A S H >> S+ 0 0 19 1,-0.2 4,-1.8 -2,-0.2 3,-0.8 0.942 112.8 53.4 -57.3 -50.1 9.2 -1.3 27.8 51 109 A D H 3> S+ 0 0 87 1,-0.3 4,-1.5 2,-0.2 -1,-0.2 0.822 103.4 60.1 -55.1 -31.5 11.9 0.1 30.0 52 110 A D H 3> S+ 0 0 43 -3,-0.3 4,-1.6 1,-0.2 -1,-0.3 0.890 103.3 49.5 -64.8 -39.9 11.9 3.2 27.7 53 111 A I H < S+ 0 0 62 -4,-3.0 3,-3.4 1,-0.2 -2,-0.2 0.916 97.7 64.4 -69.7 -44.5 6.0 7.7 32.4 58 116 A D H 3< S+ 0 0 133 -4,-3.4 -1,-0.2 1,-0.3 -2,-0.2 0.766 85.7 75.3 -51.0 -25.4 8.1 8.5 35.5 59 117 A N T 3< S+ 0 0 122 -4,-0.9 -1,-0.3 -3,-0.4 2,-0.2 0.638 94.2 66.7 -63.1 -10.8 7.9 12.1 34.2 60 118 A E S < S- 0 0 73 -3,-3.4 -3,-0.0 1,-0.1 0, 0.0 -0.613 102.0 -83.8-106.7 168.3 4.3 11.9 35.5 61 119 A E > - 0 0 136 -2,-0.2 3,-1.9 1,-0.1 -1,-0.1 -0.342 39.2-113.5 -68.5 151.2 2.9 11.6 39.1 62 120 A P T 3 S+ 0 0 101 0, 0.0 -1,-0.1 0, 0.0 -4,-0.0 0.319 120.4 34.6 -69.1 13.4 2.7 8.0 40.6 63 121 A N T 3 S+ 0 0 144 0, 0.0 -2,-0.1 0, 0.0 0, 0.0 0.047 88.7 132.8-154.6 27.5 -1.0 8.6 40.4 64 122 A S X - 0 0 17 -3,-1.9 3,-1.1 1,-0.1 4,-0.2 -0.379 64.6-117.8 -81.9 163.3 -1.6 10.7 37.3 65 123 A P T >> S+ 0 0 112 0, 0.0 3,-1.4 0, 0.0 4,-0.7 0.832 111.8 66.0 -70.0 -33.2 -4.2 9.9 34.7 66 124 A K H 3> S+ 0 0 112 1,-0.3 4,-1.9 2,-0.2 5,-0.2 0.500 82.7 83.3 -67.7 -1.5 -1.6 9.3 32.0 67 125 A I H <> S+ 0 0 43 -3,-1.1 4,-1.9 2,-0.2 -1,-0.3 0.846 88.0 48.9 -71.0 -35.0 -0.6 6.3 34.1 68 126 A R H <> S+ 0 0 208 -3,-1.4 4,-2.2 -4,-0.2 -2,-0.2 0.925 113.0 45.0 -71.4 -46.3 -3.3 4.1 32.6 69 127 A V H X S+ 0 0 41 -4,-0.7 4,-1.3 2,-0.2 -2,-0.2 0.933 118.1 43.0 -64.4 -46.7 -2.5 4.9 28.9 70 128 A Y H X S+ 0 0 47 -4,-1.9 4,-1.0 1,-0.2 3,-0.2 0.906 113.0 53.4 -66.2 -40.8 1.2 4.6 29.3 71 129 A N H >X S+ 0 0 82 -4,-1.9 4,-1.0 -5,-0.2 3,-0.7 0.893 102.7 58.6 -60.5 -40.1 0.8 1.4 31.4 72 130 A T H >X S+ 0 0 61 -4,-2.2 4,-1.0 1,-0.3 3,-1.0 0.899 97.2 61.0 -56.3 -42.3 -1.3 -0.1 28.7 73 131 A V H >X S+ 0 0 14 -4,-1.3 4,-2.3 1,-0.3 3,-0.7 0.862 96.7 60.5 -53.4 -37.8 1.6 0.3 26.3 74 132 A I H X - 0 0 46 -4,-3.9 3,-1.1 -5,-0.1 4,-1.0 -0.679 44.3-156.5-171.7 111.6 4.2 -13.9 21.7 84 142 A N H 3> S+ 0 0 76 -4,-0.4 4,-1.4 1,-0.3 5,-0.2 0.734 96.1 69.7 -62.6 -20.8 3.9 -11.6 18.7 85 143 A K H 3> S+ 0 0 158 1,-0.2 4,-1.9 2,-0.2 -1,-0.3 0.881 96.1 50.7 -64.5 -38.6 0.8 -13.6 17.8 86 144 A Q H <> S+ 0 0 62 -3,-1.1 4,-3.1 -7,-0.2 -1,-0.2 0.854 102.2 61.8 -67.6 -35.1 -1.1 -12.2 20.8 87 145 A T H X S+ 0 0 3 -4,-1.0 4,-1.2 1,-0.2 -1,-0.2 0.918 110.2 39.3 -57.2 -45.3 -0.1 -8.6 19.8 88 146 A I H X S+ 0 0 43 -4,-1.4 4,-1.4 2,-0.2 -1,-0.2 0.863 114.6 54.2 -72.9 -36.7 -2.0 -9.0 16.5 89 147 A H H X S+ 0 0 94 -4,-1.9 4,-2.2 1,-0.2 5,-0.2 0.893 102.8 57.0 -64.3 -40.7 -4.8 -10.9 18.1 90 148 A L H X S+ 0 0 36 -4,-3.1 4,-1.2 1,-0.2 -1,-0.2 0.909 109.6 44.6 -57.2 -44.2 -5.4 -8.2 20.7 91 149 A L H < S+ 0 0 2 -4,-1.2 -1,-0.2 -5,-0.2 -2,-0.2 0.772 109.6 58.2 -71.4 -26.3 -5.9 -5.6 18.0 92 150 A K H < S+ 0 0 95 -4,-1.4 -2,-0.2 1,-0.2 -1,-0.2 0.904 107.6 44.1 -70.5 -42.2 -8.1 -8.1 16.1 93 151 A R H < S+ 0 0 157 -4,-2.2 -1,-0.2 -5,-0.1 -2,-0.2 0.779 105.4 77.9 -73.4 -25.8 -10.6 -8.5 19.0 94 152 A L S < S- 0 0 50 -4,-1.2 2,-0.1 -5,-0.2 0, 0.0 -0.531 93.0-104.0 -82.8 150.9 -10.6 -4.7 19.6 95 153 A P >> - 0 0 71 0, 0.0 4,-2.8 0, 0.0 3,-1.0 -0.411 24.4-116.7 -74.0 149.6 -12.6 -2.4 17.2 96 154 A A H 3> S+ 0 0 39 1,-0.3 4,-1.8 2,-0.2 5,-0.1 0.737 116.0 63.1 -56.5 -21.7 -10.8 -0.3 14.6 97 155 A D H 3> S+ 0 0 97 2,-0.2 4,-0.5 1,-0.2 -1,-0.3 0.885 111.0 33.6 -72.2 -38.8 -12.1 2.7 16.5 98 156 A V H <> S+ 0 0 55 -3,-1.0 4,-1.9 2,-0.2 3,-0.3 0.800 113.0 63.6 -83.4 -31.4 -10.1 1.8 19.6 99 157 A L H X S+ 0 0 2 -4,-2.8 4,-2.6 1,-0.2 5,-0.2 0.913 96.9 55.5 -57.2 -47.7 -7.3 0.4 17.5 100 158 A K H X S+ 0 0 68 -4,-1.8 4,-1.8 1,-0.2 -1,-0.2 0.851 107.1 51.5 -57.2 -33.8 -6.6 3.8 15.9 101 159 A K H X S+ 0 0 111 -4,-0.5 4,-2.3 -3,-0.3 -1,-0.2 0.891 108.1 51.4 -70.1 -38.9 -6.1 5.2 19.5 102 160 A T H X S+ 0 0 18 -4,-1.9 4,-1.1 1,-0.2 -2,-0.2 0.918 109.6 49.3 -63.5 -44.1 -3.7 2.4 20.3 103 161 A I H X S+ 0 0 1 -4,-2.6 4,-2.4 1,-0.2 3,-0.2 0.894 109.9 52.4 -62.4 -40.3 -1.6 3.1 17.2 104 162 A K H X S+ 0 0 82 -4,-1.8 4,-3.0 1,-0.2 5,-0.2 0.948 105.7 52.3 -60.8 -50.7 -1.5 6.8 18.1 105 163 A N H X S+ 0 0 67 -4,-2.3 4,-0.7 1,-0.2 -1,-0.2 0.775 111.2 50.6 -57.7 -25.4 -0.3 6.2 21.6 106 164 A T H X S+ 0 0 8 -4,-1.1 4,-1.4 -3,-0.2 3,-0.5 0.918 112.3 42.9 -78.7 -45.8 2.5 4.1 20.0 107 165 A L H X S+ 0 0 8 -4,-2.4 4,-2.4 1,-0.2 -2,-0.2 0.816 105.2 66.0 -68.8 -30.2 3.5 6.7 17.5 108 166 A D H X S+ 0 0 93 -4,-3.0 4,-0.8 1,-0.2 -1,-0.2 0.857 103.0 47.2 -59.5 -34.6 3.3 9.4 20.2 109 167 A I H >X S+ 0 0 0 -4,-0.7 4,-1.3 -3,-0.5 3,-0.6 0.909 108.1 54.2 -73.0 -43.2 6.2 7.7 21.9 110 168 A H H >< S+ 0 0 62 -4,-1.4 3,-0.5 1,-0.3 -2,-0.2 0.912 105.8 53.2 -56.2 -45.6 8.3 7.4 18.8 111 169 A K H >< S+ 0 0 115 -4,-2.4 3,-1.0 1,-0.2 -1,-0.3 0.785 102.0 60.7 -61.8 -27.9 7.9 11.2 18.2 112 170 A S H << S+ 0 0 77 -4,-0.8 -1,-0.2 -3,-0.6 -2,-0.2 0.878 107.2 43.6 -67.4 -38.0 9.2 11.7 21.7 113 171 A I T << S+ 0 0 64 -4,-1.3 -1,-0.3 -3,-0.5 -2,-0.2 0.225 81.6 156.1 -91.0 13.7 12.5 10.0 20.9 114 172 A T < - 0 0 91 -3,-1.0 -3,-0.1 -5,-0.1 -4,-0.0 -0.189 24.3-167.9 -45.3 108.5 12.7 11.9 17.6 115 173 A I + 0 0 142 -2,-0.0 -1,-0.1 2,-0.0 -2,-0.0 -0.026 45.5 33.8 -87.5-164.9 16.4 11.8 16.8 116 174 A N S S- 0 0 121 1,-0.2 0, 0.0 -2,-0.0 0, 0.0 0.132 76.5-118.6 45.6-170.7 18.3 13.8 14.2 117 175 A N + 0 0 140 2,-0.0 -1,-0.2 0, 0.0 2,-0.1 -0.281 36.9 172.9-162.7 64.9 17.1 17.3 13.3 118 176 A P 0 0 103 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.453 360.0 360.0 -79.0 151.2 16.1 17.7 9.6 119 177 A K 0 0 240 -2,-0.1 -2,-0.0 0, 0.0 0, 0.0 -0.613 360.0 360.0 -74.2 360.0 14.5 20.8 8.3