==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-OCT-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SPLICING, RNA BINDING PROTEIN 25-FEB-11 2L9W . COMPND 2 MOLECULE: U4/U6 SNRNA-ASSOCIATED-SPLICING FACTOR PRP24; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR S.A.MARTIN-TUMASZ,S.E.BUTCHER . 108 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7144.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 75 69.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 18 16.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 7.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 39 36.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 2.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 292 A F 0 0 236 0, 0.0 4,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-139.5 -3.8 -4.0 17.2 2 293 A L > + 0 0 93 2,-0.1 4,-0.9 3,-0.0 3,-0.1 0.156 360.0 99.4-129.0 17.0 -5.8 -6.1 14.7 3 294 A E H >> S+ 0 0 52 1,-0.2 4,-3.0 2,-0.2 3,-1.0 0.944 75.9 58.8 -70.2 -48.2 -4.1 -5.0 11.5 4 295 A R H 3> S+ 0 0 170 1,-0.3 4,-1.9 2,-0.2 -1,-0.2 0.792 100.5 58.4 -52.9 -29.0 -1.9 -8.0 11.2 5 296 A N H 3> S+ 0 0 106 1,-0.2 4,-2.2 2,-0.2 -1,-0.3 0.902 113.8 36.9 -71.1 -38.3 -5.0 -10.2 11.1 6 297 A E H > - 0 0 93 1,-0.2 3,-1.1 2,-0.1 4,-1.1 -0.524 52.5-165.8 -66.4 110.4 -11.3 -12.2 -4.0 16 307 A S T 34 S+ 0 0 86 -2,-0.6 4,-0.5 1,-0.3 -1,-0.2 0.530 83.0 75.3 -77.7 -3.6 -9.9 -10.2 -6.9 17 308 A K T 3> S+ 0 0 140 2,-0.2 4,-1.9 3,-0.1 -1,-0.3 0.791 97.9 49.1 -73.7 -24.0 -12.6 -7.6 -6.2 18 309 A E T <4 S+ 0 0 58 -3,-1.1 -2,-0.2 2,-0.2 -1,-0.1 0.984 106.3 51.4 -75.9 -57.9 -10.4 -6.7 -3.2 19 310 A L T < S+ 0 0 48 -4,-1.1 -1,-0.2 1,-0.2 -2,-0.2 0.559 111.9 51.6 -58.6 -10.2 -7.1 -6.5 -5.1 20 311 A E T 4 S+ 0 0 88 -4,-0.5 55,-0.3 1,-0.1 -1,-0.2 0.887 111.5 42.1 -90.3 -55.1 -8.9 -4.1 -7.5 21 312 A T S < S+ 0 0 17 -4,-1.9 2,-0.3 53,-0.1 -2,-0.2 0.051 126.3 38.0 -77.6 30.2 -10.3 -1.7 -5.0 22 313 A L + 0 0 2 45,-0.2 2,-0.3 49,-0.1 45,-0.2 -0.957 59.5 177.8-172.8 155.8 -7.0 -1.9 -3.2 23 314 A I E -A 66 0A 3 43,-2.0 43,-2.6 -2,-0.3 2,-0.6 -0.940 34.4-107.4-155.7 168.1 -3.3 -2.1 -3.7 24 315 A C E -AB 65 94A 1 70,-3.0 70,-2.0 -2,-0.3 2,-0.3 -0.942 32.1-141.0-108.6 114.2 -0.1 -2.2 -1.7 25 316 A L E -AB 64 93A 9 39,-3.0 39,-1.2 -2,-0.6 68,-0.2 -0.588 13.1-166.6 -76.0 132.8 1.8 1.0 -1.9 26 317 A F E + B 0 92A 0 66,-1.7 66,-1.9 -2,-0.3 37,-0.1 -0.503 52.1 108.7-121.7 57.2 5.6 0.5 -2.1 27 318 A P + 0 0 6 0, 0.0 2,-0.9 0, 0.0 -1,-0.1 0.046 43.8 120.8-111.2 23.4 7.3 3.9 -1.5 28 319 A L - 0 0 6 34,-0.5 2,-0.1 -3,-0.1 5,-0.1 -0.783 42.8-177.4 -94.0 104.4 8.6 2.9 1.9 29 320 A S > - 0 0 14 -2,-0.9 3,-2.0 4,-0.1 58,-0.1 -0.229 48.5 -86.8 -91.2-177.7 12.3 3.2 1.8 30 321 A D T 3 S+ 0 0 157 1,-0.3 3,-0.1 57,-0.1 -1,-0.1 0.506 133.8 48.8 -68.9 -2.6 15.0 2.5 4.4 31 322 A K T 3 S+ 0 0 149 1,-0.1 2,-0.4 56,-0.0 -1,-0.3 0.248 102.5 70.2-117.1 5.8 14.2 6.0 5.6 32 323 A V < - 0 0 16 -3,-2.0 -1,-0.1 55,-0.0 0, 0.0 -0.927 62.9-178.6-134.3 108.6 10.4 5.7 5.7 33 324 A S > - 0 0 70 -2,-0.4 4,-1.5 -3,-0.1 3,-0.3 -0.557 43.7 -79.6-104.3 168.1 8.7 3.5 8.3 34 325 A P H > S+ 0 0 41 0, 0.0 4,-1.3 0, 0.0 3,-0.2 0.735 125.2 41.8 -30.8 -56.3 5.1 2.5 9.2 35 326 A S H > S+ 0 0 92 1,-0.2 4,-2.1 2,-0.2 3,-0.4 0.957 113.0 53.4 -64.4 -49.1 4.0 5.7 11.1 36 327 A L H > S+ 0 0 94 -3,-0.3 4,-2.4 1,-0.2 -1,-0.2 0.774 102.9 63.8 -53.6 -26.8 5.7 8.0 8.6 37 328 A I H X S+ 0 0 4 -4,-1.5 4,-1.6 2,-0.2 -1,-0.2 0.964 104.2 41.5 -62.6 -54.6 3.7 6.0 6.0 38 329 A C H X S+ 0 0 30 -4,-1.3 4,-2.7 -3,-0.4 5,-0.4 0.897 113.9 51.9 -64.2 -45.6 0.3 7.1 7.2 39 330 A Q H X S+ 0 0 114 -4,-2.1 4,-1.9 1,-0.2 -1,-0.2 0.980 114.1 44.6 -51.1 -58.8 1.4 10.7 7.8 40 331 A F H X>S+ 0 0 45 -4,-2.4 4,-2.8 1,-0.2 5,-0.7 0.722 111.1 56.2 -55.8 -27.2 2.8 10.8 4.2 41 332 A L H X>S+ 0 0 2 -4,-1.6 6,-1.4 2,-0.2 4,-1.0 0.940 114.7 35.2 -75.7 -46.1 -0.4 9.1 3.0 42 333 A Q H <5S+ 0 0 86 -4,-2.7 -2,-0.2 4,-0.3 -1,-0.2 0.705 118.9 58.7 -74.9 -19.3 -2.7 11.8 4.4 43 334 A E H <5S+ 0 0 142 -4,-1.9 -2,-0.2 -5,-0.4 -3,-0.2 0.909 129.0 4.2 -74.5 -47.8 0.1 14.1 3.5 44 335 A E H <5S+ 0 0 110 -4,-2.8 -3,-0.2 -5,-0.1 -2,-0.2 0.812 135.1 45.3-107.1 -47.8 0.2 13.3 -0.3 45 336 A I T < - 0 0 73 -3,-0.1 4,-1.3 -2,-0.1 6,-0.0 -0.756 67.6 -74.5-145.9-164.2 -8.7 10.1 5.4 49 340 A E T 4 S+ 0 0 142 -2,-0.2 -2,-0.1 2,-0.2 0, 0.0 0.592 128.5 53.4 -78.7 -9.7 -11.7 8.0 6.7 50 341 A K T 4 S+ 0 0 105 1,-0.1 -1,-0.1 0, 0.0 -3,-0.1 0.936 116.3 29.4 -88.6 -57.2 -13.6 9.3 3.6 51 342 A D T 4 S+ 0 0 33 -5,-0.3 2,-0.5 17,-0.1 18,-0.3 0.701 117.7 65.6 -78.8 -20.2 -11.3 8.3 0.6 52 343 A I < - 0 0 9 -4,-1.3 16,-0.2 16,-0.2 3,-0.2 -0.889 58.3-168.2-107.7 129.1 -9.9 5.4 2.5 53 344 A R S S- 0 0 165 14,-3.2 2,-0.3 -2,-0.5 -1,-0.2 0.857 81.2 -28.7 -77.4 -35.4 -12.1 2.5 3.3 54 345 A K E -C 67 0A 83 13,-0.7 13,-1.6 -3,-0.1 -1,-0.4 -0.899 58.6-153.1-176.7 147.5 -9.2 1.3 5.5 55 346 A I E -C 66 0A 34 -2,-0.3 2,-0.4 11,-0.2 11,-0.2 -0.999 11.5-178.0-135.0 133.1 -5.5 1.5 5.7 56 347 A L E -C 65 0A 4 9,-2.2 9,-1.9 -2,-0.4 2,-0.5 -0.990 26.6-122.6-133.1 142.9 -3.0 -0.9 7.2 57 348 A L E -C 64 0A 39 -2,-0.4 2,-0.7 7,-0.2 7,-0.2 -0.708 18.4-162.6 -89.3 127.4 0.8 -0.7 7.5 58 349 A V E > > +C 63 0A 4 5,-2.3 5,-3.3 -2,-0.5 3,-0.6 -0.768 19.9 163.6-111.5 85.5 2.7 -3.7 6.0 59 350 A S T 3 5 + 0 0 57 -2,-0.7 -1,-0.1 3,-0.2 5,-0.1 0.065 60.1 75.7 -94.2 26.4 6.3 -3.6 7.4 60 351 A D T 3 5S+ 0 0 86 3,-0.1 -1,-0.2 1,-0.1 -2,-0.0 0.230 120.7 11.6-116.3 14.2 7.4 -7.2 6.5 61 352 A F T < 5S- 0 0 20 -3,-0.6 -2,-0.1 2,-0.1 42,-0.1 -0.038 113.3-106.1 179.1 35.7 7.9 -6.3 2.8 62 353 A N T 5S+ 0 0 41 1,-0.1 -34,-0.5 41,-0.1 2,-0.3 0.759 73.9 124.8 18.1 79.7 7.6 -2.5 3.2 63 354 A G E < - C 0 58A 0 -5,-3.3 -5,-2.3 -37,-0.1 2,-0.4 -0.909 51.6-134.6-143.3 174.9 4.2 -1.8 1.7 64 355 A A E -AC 25 57A 0 -39,-1.2 -39,-3.0 -2,-0.3 2,-0.5 -0.958 15.8-141.6-137.1 118.0 1.0 -0.2 2.7 65 356 A I E +AC 24 56A 4 -9,-1.9 -9,-2.2 -2,-0.4 2,-0.4 -0.695 29.3 174.1 -84.6 123.5 -2.4 -1.8 2.0 66 357 A I E -AC 23 55A 0 -43,-2.6 -43,-2.0 -2,-0.5 2,-0.7 -0.995 25.0-167.1-136.8 127.5 -4.9 0.8 0.9 67 358 A I E - C 0 54A 35 -13,-1.6 -14,-3.2 -2,-0.4 -13,-0.7 -0.942 17.0-168.7-108.3 98.3 -8.4 0.4 -0.3 68 359 A F - 0 0 4 -2,-0.7 -15,-0.2 -16,-0.2 -16,-0.2 0.088 47.7 -80.4 -67.1-156.5 -9.5 3.8 -1.7 69 360 A R S S+ 0 0 136 -18,-0.3 2,-0.3 1,-0.2 -17,-0.1 0.812 105.5 19.4 -85.5 -24.8 -13.2 4.1 -2.4 70 361 A D >> - 0 0 58 1,-0.1 4,-2.0 -50,-0.1 3,-0.8 -1.000 68.9-119.6-149.5 149.8 -13.3 2.3 -5.8 71 362 A S H 3> S+ 0 0 13 -2,-0.3 4,-1.7 1,-0.2 5,-0.3 0.799 110.1 58.7 -49.7 -39.7 -11.4 -0.2 -7.9 72 363 A K H 3> S+ 0 0 138 1,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.911 111.2 40.7 -62.1 -38.8 -11.0 2.2 -10.8 73 364 A F H <> S+ 0 0 85 -3,-0.8 4,-3.2 2,-0.2 5,-0.3 0.836 108.1 60.3 -81.2 -34.2 -9.2 4.8 -8.7 74 365 A A H X S+ 0 0 0 -4,-2.0 4,-1.7 2,-0.2 -1,-0.2 0.943 116.9 31.6 -59.6 -45.2 -7.1 2.3 -6.8 75 366 A A H X S+ 0 0 49 -4,-1.7 4,-2.2 -55,-0.3 -2,-0.2 0.872 119.6 53.5 -81.7 -36.7 -5.4 1.1 -9.9 76 367 A K H X S+ 0 0 104 -4,-1.8 4,-1.9 -5,-0.3 -2,-0.2 0.898 112.9 43.8 -64.8 -36.6 -5.6 4.4 -11.7 77 368 A M H X>S+ 0 0 45 -4,-3.2 4,-3.3 2,-0.2 5,-0.5 0.887 107.1 60.3 -77.6 -38.6 -3.9 6.2 -8.8 78 369 A L H X5S+ 0 0 27 -4,-1.7 4,-2.0 -5,-0.3 -2,-0.2 0.948 110.8 42.3 -47.8 -49.9 -1.4 3.4 -8.6 79 370 A M H <5S+ 0 0 152 -4,-2.2 -2,-0.2 1,-0.2 -1,-0.2 0.879 119.8 41.0 -69.0 -39.9 -0.4 4.1 -12.1 80 371 A I H <5S+ 0 0 123 -4,-1.9 -2,-0.2 -5,-0.1 -1,-0.2 0.797 122.2 39.3 -81.2 -27.3 -0.4 8.0 -11.8 81 372 A L H <5S+ 0 0 42 -4,-3.3 -3,-0.2 -5,-0.2 -2,-0.2 0.898 105.6 68.0 -88.3 -45.2 1.2 8.2 -8.4 82 373 A N S < +D 89 0B 72 3,-3.2 3,-1.5 -2,-0.5 -2,-0.0 -0.985 62.4 2.1-150.9 135.4 11.3 9.8 -3.1 87 378 A Q T 3 S- 0 0 95 -2,-0.3 3,-0.1 1,-0.3 -57,-0.1 0.737 129.1 -57.5 63.5 26.3 14.0 9.7 -0.4 88 379 A G T 3 S+ 0 0 70 1,-0.3 -1,-0.3 -59,-0.0 2,-0.3 0.547 124.1 88.6 83.7 7.7 16.6 9.3 -3.1 89 380 A K E < S-D 86 0B 126 -3,-1.5 -3,-3.2 -62,-0.1 2,-0.6 -0.816 83.8-101.7-130.3 170.3 14.9 6.2 -4.5 90 381 A V E -D 85 0B 84 -2,-0.3 2,-0.4 -5,-0.3 -5,-0.3 -0.849 36.1-151.0 -96.6 123.8 12.2 5.3 -7.0 91 382 A I E +D 84 0B 9 -7,-2.1 -7,-1.8 -2,-0.6 -8,-1.2 -0.789 23.8 161.0-100.0 140.5 8.9 4.6 -5.4 92 383 A R E -B 26 0A 51 -66,-1.9 -66,-1.7 -2,-0.4 2,-0.3 -0.762 18.4-146.3-143.9 179.5 6.4 2.2 -6.9 93 384 A S E +B 25 0A 5 -2,-0.2 2,-0.3 -68,-0.2 -68,-0.2 -0.934 21.1 150.8-148.5 176.8 3.3 0.1 -6.1 94 385 A G E -B 24 0A 6 -70,-2.0 -70,-3.0 -2,-0.3 2,-0.1 -0.870 45.3 -85.2-178.1-159.2 1.4 -3.1 -6.9 95 386 A T > - 0 0 33 -72,-0.3 4,-1.0 -2,-0.3 -72,-0.1 0.008 68.0 -55.5-108.3-136.5 -0.8 -5.3 -4.9 96 387 A I H > S+ 0 0 14 2,-0.2 4,-0.8 1,-0.1 -85,-0.1 0.868 134.5 37.7 -76.8 -35.8 -0.0 -8.2 -2.6 97 388 A N H > S+ 0 0 89 2,-0.2 4,-1.8 1,-0.2 3,-0.2 0.910 115.4 51.3 -82.1 -43.3 2.0 -10.3 -5.1 98 389 A D H > S+ 0 0 53 1,-0.2 4,-2.2 2,-0.2 -2,-0.2 0.807 109.4 53.0 -64.5 -25.6 3.8 -7.4 -6.8 99 390 A M H X S+ 0 0 1 -4,-1.0 4,-2.2 2,-0.2 -1,-0.2 0.838 105.1 54.6 -77.3 -32.1 4.8 -6.2 -3.4 100 391 A K H X S+ 0 0 80 -4,-0.8 4,-1.8 2,-0.2 -2,-0.2 0.856 109.2 48.4 -66.7 -35.1 6.2 -9.6 -2.6 101 392 A R H X S+ 0 0 148 -4,-1.8 4,-2.1 2,-0.2 -2,-0.2 0.946 112.2 46.8 -68.0 -49.5 8.3 -9.3 -5.8 102 393 A Y H X S+ 0 0 53 -4,-2.2 4,-1.5 1,-0.2 -2,-0.2 0.838 107.3 60.3 -59.0 -35.1 9.4 -5.9 -4.8 103 394 A Y H X S+ 0 0 67 -4,-2.2 4,-3.2 2,-0.2 3,-0.4 0.924 102.1 50.3 -58.4 -48.7 10.1 -7.4 -1.4 104 395 A N H X S+ 0 0 88 -4,-1.8 4,-2.2 1,-0.3 -2,-0.2 0.953 109.4 51.8 -53.0 -50.7 12.6 -9.8 -2.9 105 396 A N H < S+ 0 0 92 -4,-2.1 -1,-0.3 1,-0.2 -2,-0.2 0.793 114.1 46.4 -53.6 -30.6 14.2 -6.8 -4.6 106 397 A Q H < S+ 0 0 77 -4,-1.5 -2,-0.2 -3,-0.4 -1,-0.2 0.949 113.5 42.9 -79.4 -54.2 14.3 -5.2 -1.1 107 398 A Q H < 0 0 123 -4,-3.2 -2,-0.2 1,-0.1 -3,-0.2 0.722 360.0 360.0 -67.9 -23.0 15.7 -8.1 1.0 108 399 A N < 0 0 168 -4,-2.2 -3,-0.2 -5,-0.3 -2,-0.1 0.891 360.0 360.0 -97.9 360.0 18.3 -9.0 -1.7