==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-FEB-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 04-MAR-11 2LA6 . COMPND 2 MOLECULE: RNA-BINDING PROTEIN FUS; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR G.LIU,R.XIAO,H.JANJUA,C.CICCOSANTI,H.WANG,H.LEE,T.B.ACTON, . 99 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6967.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 65 65.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 24 24.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 16 16.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 18 18.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 240 0, 0.0 2,-0.2 0, 0.0 4,-0.1 0.000 360.0 360.0 360.0 155.2 25.1 14.8 -6.0 2 2 A G - 0 0 42 2,-0.1 0, 0.0 1,-0.1 0, 0.0 -0.897 360.0 -75.5-161.9-171.3 25.3 17.5 -3.2 3 3 A H S S+ 0 0 186 -2,-0.2 2,-0.4 1,-0.0 -1,-0.1 0.866 115.5 52.8 -68.4 -40.6 23.6 19.5 -0.4 4 4 A H S S- 0 0 174 -3,-0.0 2,-0.3 2,-0.0 -2,-0.1 -0.846 79.0-153.4-100.5 135.7 21.7 21.8 -3.0 5 5 A H - 0 0 121 -2,-0.4 -2,-0.0 1,-0.1 3,-0.0 -0.889 15.8-143.1-117.3 140.3 19.7 20.1 -5.8 6 6 A H S S+ 0 0 185 -2,-0.3 2,-1.8 1,-0.2 3,-0.2 0.861 94.2 68.0 -69.9 -41.0 18.8 21.4 -9.3 7 7 A H + 0 0 132 1,-0.2 -1,-0.2 4,-0.0 4,-0.2 -0.595 62.2 165.7 -80.5 77.1 15.3 19.9 -9.4 8 8 A H + 0 0 161 -2,-1.8 -1,-0.2 2,-0.1 2,-0.1 0.777 48.5 89.8 -67.1 -31.1 13.9 22.2 -6.6 9 9 A S S S- 0 0 90 -3,-0.2 2,-0.5 1,-0.1 -2,-0.0 -0.399 89.0-111.4 -64.5 144.1 10.3 21.3 -7.5 10 10 A H - 0 0 115 -2,-0.1 2,-1.2 1,-0.1 -1,-0.1 -0.724 21.9-135.6 -85.0 121.4 8.9 18.3 -5.6 11 11 A S - 0 0 76 -2,-0.5 2,-1.0 -4,-0.2 -1,-0.1 -0.654 18.9-168.0 -79.6 91.9 8.3 15.2 -7.9 12 12 A D - 0 0 68 -2,-1.2 2,-0.1 2,-0.0 64,-0.1 -0.775 15.3-173.7 -79.4 98.8 4.8 13.9 -6.8 13 13 A N - 0 0 37 -2,-1.0 64,-0.1 2,-0.2 59,-0.1 -0.407 33.5-114.7 -90.3 174.4 4.7 10.4 -8.5 14 14 A N S S+ 0 0 55 -2,-0.1 56,-2.7 62,-0.1 2,-0.4 0.248 91.8 73.4 -99.5 12.4 1.7 8.0 -8.6 15 15 A T E -A 69 0A 29 54,-0.3 83,-2.5 83,-0.1 2,-0.3 -0.993 63.3-163.1-130.8 128.6 3.3 5.1 -6.5 16 16 A I E -AB 68 97A 0 52,-1.9 52,-2.2 -2,-0.4 2,-0.6 -0.827 15.7-137.0-115.4 147.3 3.8 5.2 -2.7 17 17 A F E -AB 67 96A 45 79,-1.6 79,-2.0 -2,-0.3 2,-0.3 -0.905 25.0-169.8-105.7 108.9 6.0 3.2 -0.3 18 18 A V E -AB 66 95A 0 48,-2.7 48,-1.7 -2,-0.6 2,-0.3 -0.794 0.6-163.8-101.2 139.0 4.1 2.2 2.9 19 19 A Q E + B 0 94A 83 75,-1.6 75,-1.6 -2,-0.3 46,-0.2 -0.865 60.5 28.8-119.4 155.1 5.8 0.7 6.1 20 20 A G + 0 0 30 -2,-0.3 68,-0.3 43,-0.3 45,-0.2 0.875 62.0 141.8 68.0 44.7 4.4 -1.2 9.2 21 21 A L - 0 0 0 43,-2.2 70,-0.2 1,-0.2 2,-0.1 0.777 62.4-107.7 -81.2 -30.8 1.2 -2.8 7.7 22 22 A G - 0 0 13 41,-0.1 -1,-0.2 1,-0.1 42,-0.2 -0.426 22.5 -84.2 119.1 160.5 1.7 -6.0 9.7 23 23 A E S S+ 0 0 91 1,-0.2 2,-0.7 -2,-0.1 39,-0.5 0.693 123.7 62.3 -68.5 -23.0 2.6 -9.7 9.1 24 24 A N S S+ 0 0 151 -3,-0.1 2,-0.3 65,-0.1 -1,-0.2 -0.840 76.6 128.8-107.1 88.4 -1.1 -10.2 8.2 25 25 A V - 0 0 7 -2,-0.7 2,-0.3 -3,-0.1 39,-0.1 -0.996 32.9-168.9-142.4 136.7 -1.5 -7.9 5.1 26 26 A T > - 0 0 70 -2,-0.3 4,-2.2 1,-0.1 5,-0.2 -0.872 36.6-112.9-120.4 161.8 -3.0 -8.5 1.5 27 27 A I H > S+ 0 0 47 -2,-0.3 4,-2.3 1,-0.2 5,-0.1 0.912 122.0 45.5 -50.8 -47.4 -3.0 -6.5 -1.8 28 28 A E H > S+ 0 0 115 2,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.718 108.1 57.5 -76.0 -24.0 -6.8 -6.0 -1.4 29 29 A S H > S+ 0 0 54 2,-0.2 4,-1.1 -3,-0.1 -1,-0.2 0.914 112.1 40.9 -67.9 -46.4 -6.4 -5.0 2.3 30 30 A V H X S+ 0 0 0 -4,-2.2 4,-2.4 2,-0.2 -2,-0.2 0.912 117.6 49.8 -64.6 -42.7 -4.0 -2.2 1.4 31 31 A A H X S+ 0 0 14 -4,-2.3 4,-1.4 -5,-0.2 -2,-0.2 0.887 110.8 47.1 -63.7 -43.6 -6.3 -1.3 -1.6 32 32 A D H < S+ 0 0 106 -4,-2.2 -1,-0.2 2,-0.2 4,-0.2 0.688 115.1 47.7 -76.2 -22.1 -9.6 -1.2 0.4 33 33 A Y H >< S+ 0 0 49 -4,-1.1 3,-0.5 -3,-0.2 -2,-0.2 0.876 118.6 38.3 -79.6 -45.0 -7.9 0.9 3.2 34 34 A F H >X S+ 0 0 0 -4,-2.4 3,-1.5 1,-0.2 4,-0.8 0.600 93.7 87.9 -83.1 -13.7 -6.3 3.5 0.7 35 35 A K T 3< S+ 0 0 127 -4,-1.4 -1,-0.2 1,-0.2 -3,-0.1 0.755 73.2 72.2 -55.7 -30.1 -9.4 3.5 -1.7 36 36 A Q T <4 S+ 0 0 121 -3,-0.5 -1,-0.2 1,-0.2 -2,-0.1 0.726 98.3 48.6 -62.3 -24.4 -11.1 6.4 0.3 37 37 A I T <4 S- 0 0 52 -3,-1.5 2,-0.3 1,-0.3 -1,-0.2 0.886 124.9 -54.9 -82.4 -44.4 -8.5 8.9 -1.1 38 38 A G S < S- 0 0 22 -4,-0.8 -1,-0.3 37,-0.1 2,-0.3 -0.983 72.2 -41.3 178.9 179.6 -8.7 8.0 -4.8 39 39 A I - 0 0 121 -2,-0.3 32,-2.4 -3,-0.1 33,-0.6 -0.469 46.9-153.0 -69.6 125.1 -8.6 5.4 -7.6 40 40 A I B -D 70 0B 20 30,-0.3 30,-0.3 -2,-0.3 11,-0.1 -0.809 26.2-105.6 -94.0 138.4 -5.7 2.9 -7.3 41 41 A K - 0 0 68 28,-2.2 9,-1.7 -2,-0.4 2,-0.3 -0.205 35.9-157.0 -57.7 155.0 -4.3 1.2 -10.6 42 42 A T E -E 49 0C 60 7,-0.3 2,-0.5 8,-0.1 -1,-0.0 -0.978 15.1-140.1-145.5 125.4 -5.3 -2.4 -11.3 43 43 A N E >> -E 48 0C 63 5,-2.1 4,-1.8 -2,-0.3 5,-0.7 -0.758 12.2-163.1 -79.3 125.8 -3.7 -5.2 -13.5 44 44 A K T 45S+ 0 0 174 -2,-0.5 -1,-0.1 3,-0.2 0, 0.0 0.682 83.2 67.2 -87.3 -21.7 -6.6 -7.1 -15.3 45 45 A K T 45S+ 0 0 198 1,-0.1 -1,-0.2 3,-0.1 -2,-0.0 0.883 121.4 21.0 -64.3 -43.2 -4.4 -10.2 -16.2 46 46 A T T 45S- 0 0 104 2,-0.2 -2,-0.2 0, 0.0 -1,-0.1 0.810 102.6-134.9 -82.7 -42.9 -4.2 -11.0 -12.4 47 47 A G T <5 + 0 0 41 -4,-1.8 -3,-0.2 1,-0.4 -2,-0.0 0.603 64.5 121.2 90.0 16.5 -7.3 -9.0 -11.6 48 48 A Q E - 0 0 48 5,-3.0 4,-0.8 -2,-0.3 -1,-0.0 -0.421 17.3-141.8 -76.1 144.4 11.1 -11.1 4.3 57 57 A R T 4 S+ 0 0 252 2,-0.1 -1,-0.1 1,-0.1 -2,-0.0 0.914 94.5 29.3 -75.9 -46.5 14.1 -13.1 3.0 58 58 A E T 4 S+ 0 0 185 1,-0.1 -1,-0.1 3,-0.0 -2,-0.0 0.892 128.4 37.4 -84.1 -42.7 15.1 -15.2 6.1 59 59 A T T 4 S- 0 0 71 2,-0.1 -2,-0.1 1,-0.0 -1,-0.1 0.779 89.6-141.9 -82.0 -30.0 11.7 -15.6 7.9 60 60 A G < + 0 0 53 -4,-0.8 2,-0.2 1,-0.3 -3,-0.1 0.491 63.2 116.4 77.1 5.1 9.5 -16.0 4.7 61 61 A K S S- 0 0 117 1,-0.1 -5,-3.0 -6,-0.1 -1,-0.3 -0.600 78.2 -80.2 -99.2 164.9 6.8 -13.9 6.4 62 62 A L E - C 0 55A 37 -39,-0.5 -7,-0.2 -7,-0.2 -1,-0.1 -0.426 28.5-154.3 -69.0 131.5 5.4 -10.4 5.4 63 63 A K E - 0 0 98 -9,-2.4 -43,-0.3 -2,-0.2 -41,-0.1 0.698 42.2-112.6 -75.7 -21.7 7.6 -7.4 6.5 64 64 A G E S+ 0 0 0 -10,-0.6 -43,-2.2 1,-0.4 2,-0.3 0.711 78.0 120.5 86.8 26.7 4.6 -5.1 6.5 65 65 A E E + C 0 54A 28 -11,-0.6 -11,-2.4 -46,-0.2 -1,-0.4 -0.892 32.4 168.3-116.7 154.5 5.8 -3.0 3.5 66 66 A A E -AC 18 53A 0 -48,-1.7 -48,-2.7 -2,-0.3 2,-0.6 -0.971 31.6-134.0-160.1 146.9 4.0 -2.4 0.1 67 67 A T E -AC 17 52A 13 -15,-1.6 -15,-1.6 -2,-0.3 2,-0.6 -0.944 24.8-161.1-104.2 117.9 4.2 -0.1 -3.0 68 68 A V E -AC 16 51A 0 -52,-2.2 -52,-1.9 -2,-0.6 2,-0.9 -0.880 3.6-155.9-106.9 108.1 0.7 1.2 -4.0 69 69 A S E -A 15 0A 16 -19,-2.6 -28,-2.2 -2,-0.6 -19,-0.3 -0.764 13.3-166.6 -85.2 104.2 0.3 2.5 -7.6 70 70 A F B -D 40 0B 0 -56,-2.7 -30,-0.3 -2,-0.9 -31,-0.1 -0.527 28.1-124.6 -79.7 158.2 -2.6 5.0 -7.8 71 71 A D S S+ 0 0 92 -32,-2.4 -31,-0.1 -2,-0.2 -1,-0.1 0.798 98.2 42.0 -73.6 -31.2 -4.0 6.2 -11.1 72 72 A D S > S- 0 0 74 -33,-0.6 4,-1.8 1,-0.1 3,-0.3 -0.961 71.9-142.1-118.7 134.2 -3.4 9.9 -10.3 73 73 A P H > S+ 0 0 52 0, 0.0 4,-2.3 0, 0.0 5,-0.2 0.808 105.3 57.3 -58.2 -34.9 -0.2 11.4 -8.6 74 74 A P H > S+ 0 0 92 0, 0.0 4,-1.8 0, 0.0 5,-0.1 0.825 109.1 47.8 -62.7 -29.4 -2.5 14.0 -6.5 75 75 A S H > S+ 0 0 12 -3,-0.3 4,-2.1 2,-0.2 5,-0.1 0.883 110.8 50.0 -74.7 -40.9 -4.3 10.8 -5.1 76 76 A A H X S+ 0 0 0 -4,-1.8 4,-1.1 2,-0.2 -1,-0.1 0.936 114.6 44.0 -60.6 -47.9 -0.9 9.1 -4.3 77 77 A K H X S+ 0 0 96 -4,-2.3 4,-2.3 1,-0.2 3,-0.2 0.884 112.0 52.5 -64.3 -44.8 0.3 12.3 -2.5 78 78 A A H X S+ 0 0 35 -4,-1.8 4,-2.1 1,-0.2 -1,-0.2 0.878 105.4 55.1 -61.4 -40.0 -3.0 12.8 -0.6 79 79 A A H X S+ 0 0 0 -4,-2.1 4,-2.3 2,-0.2 -1,-0.2 0.814 109.6 48.3 -60.8 -34.2 -2.9 9.1 0.6 80 80 A I H X S+ 0 0 21 -4,-1.1 4,-2.0 -3,-0.2 15,-0.2 0.968 112.5 45.5 -69.2 -55.0 0.6 9.9 2.1 81 81 A D H < S+ 0 0 125 -4,-2.3 -2,-0.2 1,-0.2 -1,-0.2 0.814 122.2 40.2 -58.4 -33.1 -0.5 13.2 3.9 82 82 A W H < S+ 0 0 135 -4,-2.1 -2,-0.2 -5,-0.2 -1,-0.2 0.949 122.5 34.1 -80.6 -56.5 -3.7 11.3 5.2 83 83 A F H >< S+ 0 0 3 -4,-2.3 3,-2.2 -5,-0.2 2,-0.4 0.539 83.6 114.8 -86.7 -11.6 -2.4 7.8 6.2 84 84 A D T 3< S+ 0 0 62 -4,-2.0 10,-0.2 1,-0.3 3,-0.1 -0.513 93.2 9.2 -63.9 116.1 1.1 8.8 7.5 85 85 A G T 3 S+ 0 0 51 8,-2.7 -1,-0.3 -2,-0.4 2,-0.2 0.487 105.3 123.1 88.7 5.6 1.0 8.0 11.2 86 86 A K < - 0 0 112 -3,-2.2 7,-2.5 7,-0.3 2,-0.6 -0.610 68.1-105.0 -95.8 159.6 -2.4 6.2 11.1 87 87 A E B -F 92 0D 131 5,-0.3 -66,-0.1 -2,-0.2 3,-0.1 -0.763 28.5-177.8 -89.4 115.8 -3.3 2.5 12.1 88 88 A F S S- 0 0 27 3,-2.3 -1,-0.2 -2,-0.6 -67,-0.1 0.947 88.7 -14.1 -70.3 -56.3 -3.7 0.1 9.2 89 89 A S S S- 0 0 86 2,-0.3 -1,-0.2 -68,-0.1 -65,-0.1 -0.461 127.6 -52.0-147.2 63.0 -4.6 -3.0 11.4 90 90 A G S S+ 0 0 52 1,-0.2 -68,-0.1 -3,-0.1 -3,-0.1 0.439 119.2 107.6 76.4 0.3 -3.6 -1.9 14.9 91 91 A N S S- 0 0 62 -70,-0.2 -3,-2.3 -71,-0.0 2,-1.0 -0.952 74.1-128.4-114.1 121.3 -0.2 -1.0 13.4 92 92 A P B -F 87 0D 98 0, 0.0 -5,-0.3 0, 0.0 -71,-0.1 -0.549 32.7-147.5 -73.8 99.0 0.9 2.7 12.9 93 93 A I - 0 0 1 -7,-2.5 -8,-2.7 -2,-1.0 2,-0.6 -0.310 8.6-145.6 -71.2 148.2 2.0 2.9 9.2 94 94 A K E -B 19 0A 105 -75,-1.6 -75,-1.6 -10,-0.2 2,-0.4 -0.946 21.4-163.8-115.4 104.9 4.8 5.2 7.8 95 95 A V E +B 18 0A 5 -2,-0.6 -77,-0.2 -15,-0.2 2,-0.2 -0.787 18.9 152.9-102.2 131.9 3.8 6.3 4.3 96 96 A S E -B 17 0A 44 -79,-2.0 -79,-1.6 -2,-0.4 2,-0.3 -0.765 48.2 -80.6-136.6 178.6 6.3 7.9 1.7 97 97 A F E -B 16 0A 35 -81,-0.3 2,-1.6 -2,-0.2 -81,-0.3 -0.693 42.6-115.9 -80.9 145.1 6.7 8.1 -2.1 98 98 A A 0 0 36 -83,-2.5 -83,-0.1 -2,-0.3 -84,-0.1 -0.637 360.0 360.0 -82.0 82.2 8.3 5.1 -3.9 99 99 A T 0 0 181 -2,-1.6 -1,-0.1 -82,-0.1 -2,-0.1 -0.534 360.0 360.0-145.9 360.0 11.5 6.9 -5.1