==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-JAN-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MEMBRANE PROTEIN 31-MAR-11 2LBG . COMPND 2 MOLECULE: MAJOR PRION PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.SAUVE,Y.AUBIN . 27 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2341.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 23 85.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 22 81.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A K > 0 0 190 0, 0.0 3,-1.2 0, 0.0 4,-0.4 0.000 360.0 360.0 360.0 48.8 2.1 -0.0 -1.2 2 2 A H T 3> + 0 0 172 1,-0.2 4,-2.5 2,-0.2 5,-0.3 0.458 360.0 90.0 -74.0 0.6 -0.7 1.3 -3.5 3 3 A M H 3> S+ 0 0 127 1,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.825 83.6 52.8 -65.8 -31.8 2.1 2.8 -5.6 4 4 A A H <> S+ 0 0 39 -3,-1.2 4,-1.9 2,-0.2 -1,-0.2 0.871 111.8 44.6 -71.7 -38.2 2.2 -0.4 -7.7 5 5 A G H > S+ 0 0 48 -4,-0.4 4,-2.4 2,-0.2 5,-0.2 0.929 117.1 42.8 -72.3 -46.6 -1.5 -0.4 -8.4 6 6 A A H X S+ 0 0 72 -4,-2.5 4,-2.1 2,-0.2 -2,-0.2 0.862 117.4 48.0 -67.4 -36.7 -1.8 3.2 -9.3 7 7 A A H X S+ 0 0 58 -4,-1.8 4,-2.5 -5,-0.3 5,-0.2 0.891 113.0 47.5 -70.9 -41.0 1.4 3.1 -11.3 8 8 A A H X S+ 0 0 56 -4,-1.9 4,-2.1 2,-0.2 5,-0.2 0.930 117.7 41.0 -66.1 -47.0 0.4 -0.0 -13.2 9 9 A A H X S+ 0 0 53 -4,-2.4 4,-2.1 1,-0.2 5,-0.2 0.864 118.6 47.3 -69.6 -37.0 -3.1 1.3 -14.0 10 10 A G H X S+ 0 0 44 -4,-2.1 4,-2.0 -5,-0.2 -2,-0.2 0.859 112.6 48.6 -73.0 -36.1 -1.8 4.7 -14.8 11 11 A A H X S+ 0 0 72 -4,-2.5 4,-1.5 2,-0.2 -2,-0.2 0.907 114.8 44.6 -70.0 -43.2 1.1 3.4 -17.0 12 12 A V H X S+ 0 0 85 -4,-2.1 4,-2.0 -5,-0.2 5,-0.3 0.964 118.5 41.3 -65.5 -54.3 -1.2 1.1 -19.0 13 13 A V H X S+ 0 0 87 -4,-2.1 4,-2.9 1,-0.2 5,-0.4 0.885 113.9 54.3 -61.6 -40.1 -4.0 3.6 -19.5 14 14 A G H X S+ 0 0 44 -4,-2.0 4,-1.8 -5,-0.2 -1,-0.2 0.829 108.2 50.4 -64.3 -32.2 -1.5 6.4 -20.1 15 15 A G H X S+ 0 0 46 -4,-1.5 4,-1.3 -3,-0.2 -2,-0.2 0.949 118.4 34.5 -71.5 -50.4 0.1 4.4 -22.8 16 16 A L H X S+ 0 0 92 -4,-2.0 4,-2.0 2,-0.2 5,-0.2 0.894 123.3 46.1 -71.6 -41.3 -3.0 3.5 -24.8 17 17 A G H X S+ 0 0 24 -4,-2.9 4,-1.9 -5,-0.3 5,-0.3 0.892 112.1 50.2 -68.9 -40.4 -4.7 6.8 -24.0 18 18 A G H X S+ 0 0 44 -4,-1.8 4,-0.7 -5,-0.4 -1,-0.2 0.827 112.1 49.0 -67.4 -31.9 -1.7 8.9 -24.9 19 19 A Y H X S+ 0 0 170 -4,-1.3 4,-3.5 3,-0.2 5,-0.4 0.981 114.4 41.0 -71.1 -59.9 -1.2 7.1 -28.2 20 20 A M H X S+ 0 0 103 -4,-2.0 4,-2.8 1,-0.2 5,-0.2 0.964 122.9 39.6 -52.3 -60.7 -4.8 7.3 -29.5 21 21 A L H X S+ 0 0 104 -4,-1.9 4,-1.5 -5,-0.2 -1,-0.2 0.774 117.1 55.2 -61.8 -25.8 -5.3 10.9 -28.3 22 22 A G H X S+ 0 0 37 -4,-0.7 4,-1.4 -5,-0.3 -2,-0.2 0.960 115.9 32.0 -72.7 -53.3 -1.7 11.6 -29.4 23 23 A S H X S+ 0 0 34 -4,-3.5 4,-1.9 2,-0.2 -2,-0.2 0.791 117.0 59.5 -74.5 -28.7 -2.0 10.4 -33.0 24 24 A A H < S+ 0 0 63 -4,-2.8 -1,-0.2 -5,-0.4 -2,-0.2 0.915 112.8 36.4 -65.5 -44.5 -5.6 11.5 -33.2 25 25 A M H < S+ 0 0 164 -4,-1.5 -1,-0.2 -5,-0.2 -2,-0.2 0.765 115.1 56.9 -79.1 -26.9 -4.8 15.1 -32.4 26 26 A S H < 0 0 94 -4,-1.4 -2,-0.2 1,-0.2 -1,-0.2 0.825 360.0 360.0 -73.0 -32.4 -1.5 15.0 -34.4 27 27 A R < 0 0 219 -4,-1.9 -2,-0.2 -5,-0.1 -3,-0.2 0.140 360.0 360.0-139.6 360.0 -3.4 13.9 -37.5