==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=1-APR-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PEPTIDE BINDING PROTEIN, HORMONE 01-APR-11 2LBN . COMPND 2 MOLECULE: NEUROPHYSIN 1; . SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; . AUTHOR H.LEE,T.NGUYEN,C.BRACKEN,E.BRESLOW . 92 1 7 7 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5664.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 50 54.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 19 20.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 3 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 9.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 12.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 6 6.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 4 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A > 0 0 75 0, 0.0 3,-2.0 0, 0.0 54,-0.9 0.000 360.0 360.0 360.0-129.0 0.9 -15.8 -21.4 2 2 A V T 3 - 0 0 125 1,-0.3 53,-0.3 52,-0.2 52,-0.1 0.016 360.0 -44.0 42.8-157.9 0.4 -17.7 -18.1 3 3 A L T >>>S- 0 0 68 51,-0.1 5,-1.8 1,-0.1 3,-1.1 0.034 88.4 -94.3 -87.6 25.1 2.5 -16.1 -15.3 4 4 A D T <45S- 0 0 54 -3,-2.0 -1,-0.1 1,-0.3 -2,-0.1 -0.196 104.6 -18.9 100.0 -50.1 5.4 -15.8 -17.7 5 5 A L T 345S- 0 0 97 -2,-0.9 -1,-0.3 3,-0.2 -3,-0.1 0.306 126.5 -52.4-160.4 -28.2 6.5 -19.1 -16.3 6 6 A D T <45S+ 0 0 114 -3,-1.1 -2,-0.2 2,-0.2 -4,-0.0 0.205 124.3 15.6 168.0 -25.7 4.7 -19.3 -12.9 7 7 A V T <5S+ 0 0 86 -4,-0.6 2,-0.3 -5,-0.0 -3,-0.1 0.358 92.2 95.5-152.5 8.6 5.2 -16.2 -10.8 8 8 A R < - 0 0 138 -5,-1.8 2,-0.7 3,-0.0 47,-0.3 -0.808 58.3-135.1-115.5 157.8 6.6 -13.1 -12.7 9 9 A T - 0 0 67 -2,-0.3 -5,-0.1 1,-0.3 -6,-0.1 -0.753 50.6 -92.5-112.3 84.6 5.0 -10.1 -14.3 10 10 A a S S- 0 0 13 -2,-0.7 -1,-0.3 10,-0.1 45,-0.1 -0.063 86.1 -22.2 45.0-144.0 6.6 -9.6 -17.8 11 11 A L S S- 0 0 57 10,-0.2 10,-1.0 41,-0.1 36,-0.1 -0.857 75.4-115.2-101.8 126.7 9.6 -7.2 -17.7 12 12 A P E -A 20 0A 60 0, 0.0 8,-0.4 0, 0.0 2,-0.3 0.110 33.1-157.8 -49.2 168.4 9.9 -4.7 -14.8 13 13 A b E > +A 19 0A 0 6,-1.1 6,-2.5 7,-0.2 5,-0.9 -0.936 43.2 23.6-146.0 169.0 9.7 -0.9 -15.4 14 14 A G T 5S+ 0 0 7 26,-0.3 2,-1.4 -2,-0.3 27,-0.0 -0.436 115.1 4.1 76.9-148.7 10.6 2.4 -13.9 15 15 A P T 5S- 0 0 78 0, 0.0 2,-1.3 0, 0.0 -1,-0.1 -0.571 135.7 -40.3 -76.3 90.6 13.5 2.7 -11.5 16 16 A G T 5S- 0 0 62 -2,-1.4 -2,-0.1 1,-0.2 0, 0.0 -0.586 125.7 -28.7 93.1 -75.4 14.9 -0.8 -11.5 17 17 A G T 5S+ 0 0 41 -2,-1.3 -3,-0.2 -5,-0.1 -1,-0.2 0.112 85.2 131.3-169.2 38.0 11.6 -2.8 -11.5 18 18 A K S -BC 19 33A 3 4,-4.0 4,-2.9 -2,-0.3 -10,-0.3 -0.952 33.8-120.5-134.6 154.8 4.1 0.1 -11.6 30 30 A D T 4 S+ 0 0 135 -12,-1.5 3,-0.4 -2,-0.3 -1,-0.2 0.971 114.6 10.6 -53.7 -81.0 2.8 -0.3 -8.1 31 31 A E T 4 S+ 0 0 145 1,-0.2 -1,-0.2 -13,-0.2 -12,-0.1 0.457 129.8 65.1 -77.4 -1.6 4.1 2.8 -6.3 32 32 A L T 4 S- 0 0 29 -14,-0.3 2,-0.3 1,-0.3 -2,-0.2 0.801 90.5-153.9 -89.0 -36.0 5.1 4.0 -9.8 33 33 A G E < -C 29 0A 19 -4,-2.9 -4,-4.0 -3,-0.4 2,-0.4 -0.722 36.7 -45.9 95.1-145.7 1.6 4.3 -11.3 34 34 A d E -C 28 0A 24 -2,-0.3 2,-0.4 -6,-0.3 -6,-0.3 -0.993 49.8-175.3-135.1 131.5 1.0 4.1 -15.0 35 35 A F E -C 27 0A 35 -8,-2.7 -8,-3.5 -2,-0.4 2,-0.5 -0.955 9.7-163.8-125.9 144.2 2.9 5.7 -17.9 36 36 A V E S-C 26 0A 51 -2,-0.4 -10,-0.3 -10,-0.3 -11,-0.1 -0.894 81.9 -22.0-130.2 101.4 2.2 5.7 -21.6 37 37 A G S S+ 0 0 53 -12,-3.4 2,-0.2 -2,-0.5 -11,-0.1 0.752 106.0 132.8 72.2 23.6 5.1 6.7 -23.8 38 38 A T S >> S- 0 0 71 -13,-0.3 3,-3.0 1,-0.1 4,-0.8 -0.565 76.6 -97.4-103.0 168.4 6.6 8.5 -20.9 39 39 A A G >4 S+ 0 0 72 1,-0.3 3,-0.6 2,-0.2 -25,-0.1 0.855 128.7 49.1 -50.3 -40.8 10.2 8.5 -19.6 40 40 A E G 34 S+ 0 0 82 1,-0.2 -1,-0.3 2,-0.1 -26,-0.3 0.274 112.7 50.6 -83.0 9.6 9.2 6.0 -17.0 41 41 A A G X4 S+ 0 0 0 -3,-3.0 3,-1.5 -28,-0.1 -2,-0.2 0.383 75.5 97.1-127.0 -1.6 7.6 4.0 -19.8 42 42 A L G X< + 0 0 75 -4,-0.8 3,-2.3 -3,-0.6 4,-0.2 0.575 57.5 95.6 -65.6 -7.6 10.4 3.8 -22.3 43 43 A R G >> + 0 0 90 1,-0.3 3,-2.4 2,-0.2 4,-0.6 0.748 60.9 82.2 -56.8 -22.5 11.2 0.4 -20.8 44 44 A c G <4 S+ 0 0 16 -3,-1.5 -1,-0.3 1,-0.3 3,-0.3 0.664 75.0 75.6 -59.3 -10.9 9.2 -1.1 -23.7 45 45 A Q G X4 S+ 0 0 126 -3,-2.3 3,-1.1 1,-0.2 -1,-0.3 0.824 88.9 55.4 -70.0 -29.5 12.4 -0.6 -25.7 46 46 A E G X> S+ 0 0 68 -3,-2.4 3,-1.1 1,-0.3 4,-0.9 0.754 97.3 63.9 -73.3 -21.5 13.8 -3.7 -23.9 47 47 A E G 3< S+ 0 0 59 -4,-0.6 5,-0.3 -3,-0.3 -1,-0.3 0.593 89.1 71.3 -74.7 -9.4 10.8 -5.6 -25.2 48 48 A N G <4 S+ 0 0 132 -3,-1.1 -1,-0.2 -4,-0.2 -2,-0.2 0.708 95.8 52.1 -77.1 -23.0 12.2 -4.9 -28.6 49 49 A Y T <4 S+ 0 0 189 -3,-1.1 -2,-0.2 -4,-0.3 -1,-0.1 0.981 114.6 29.5 -77.1 -67.9 15.0 -7.4 -28.0 50 50 A L S < S- 0 0 121 -4,-0.9 2,-1.6 2,-0.0 -1,-0.3 -0.862 73.9-137.5-104.0 112.2 13.4 -10.6 -26.9 51 51 A P + 0 0 130 0, 0.0 -3,-0.1 0, 0.0 -4,-0.1 -0.429 45.9 172.2 -62.2 88.9 9.8 -11.3 -28.2 52 52 A S - 0 0 48 -2,-1.6 -41,-0.1 -5,-0.3 -2,-0.0 -0.931 29.4-144.9-115.3 134.0 8.8 -12.5 -24.8 53 53 A P + 0 0 82 0, 0.0 2,-0.1 0, 0.0 3,-0.1 -0.070 24.6 172.0 -74.3-176.2 5.3 -13.4 -23.5 54 54 A a - 0 0 22 1,-0.6 -52,-0.2 -52,-0.1 -51,-0.1 -0.387 45.8 -57.2 162.3 118.6 4.3 -12.6 -19.9 55 55 A Q - 0 0 38 -54,-0.9 -1,-0.6 -53,-0.3 2,-0.3 0.172 66.6-145.1 27.3-153.0 1.2 -12.7 -17.8 56 56 A S + 0 0 82 1,-0.3 -1,-0.0 -3,-0.1 0, 0.0 -0.929 41.0 7.9-173.5-162.4 -1.6 -10.6 -19.3 57 57 A G - 0 0 43 -2,-0.3 2,-0.7 1,-0.1 -1,-0.3 0.153 61.3-129.2 -32.0 148.8 -4.6 -8.3 -18.8 58 58 A Q - 0 0 68 1,-0.1 9,-1.9 -3,-0.1 -1,-0.1 -0.806 61.4 -62.7-113.0 92.2 -5.1 -7.2 -15.3 59 59 A K S S- 0 0 140 -2,-0.7 8,-1.2 7,-0.2 -1,-0.1 0.881 71.5-116.6 24.3 93.2 -8.8 -7.9 -14.4 60 60 A P E -D 66 0B 92 0, 0.0 2,-0.3 0, 0.0 6,-0.3 -0.114 32.3-160.6 -49.3 152.0 -10.5 -5.5 -16.9 61 61 A e E >> -D 65 0B 33 4,-4.0 4,-0.9 13,-0.1 3,-0.6 -0.870 29.5-117.7-132.3 165.3 -12.7 -2.6 -15.7 62 62 A G T 34 S+ 0 0 93 -2,-0.3 4,-0.1 1,-0.2 11,-0.0 0.150 95.6 87.9 -89.1 20.6 -15.4 -0.5 -17.2 63 63 A S T 34 S- 0 0 30 2,-0.3 -1,-0.2 19,-0.0 3,-0.1 0.174 121.7 -72.8-103.5 17.9 -13.2 2.7 -16.8 64 64 A G T <4 S- 0 0 56 -3,-0.6 2,-0.3 1,-0.3 14,-0.3 0.635 102.1 -14.0 106.4 12.5 -11.5 2.3 -20.2 65 65 A G E < S-D 61 0B 5 -4,-0.9 -4,-4.0 9,-0.1 2,-0.3 -0.941 91.2 -29.2 163.1-146.4 -9.1 -0.7 -19.5 66 66 A R E -DE 60 74B 107 8,-2.4 2,-3.0 -2,-0.3 8,-2.8 -0.825 66.2 -87.8-109.5 160.7 -7.5 -2.9 -16.9 67 67 A f E + E 0 73B 20 -9,-1.9 6,-0.3 -8,-1.2 4,-0.1 -0.302 60.1 172.1 -62.8 69.1 -6.5 -2.3 -13.3 68 68 A A - 0 0 13 4,-3.1 2,-0.3 -2,-3.0 -1,-0.2 0.970 51.5 -15.3 -49.5 -84.7 -3.1 -1.0 -14.5 69 69 A A S S- 0 0 6 3,-0.3 -1,-0.2 -3,-0.2 -39,-0.1 -0.953 121.1 -17.7-132.5 150.3 -1.4 0.4 -11.4 70 70 A A S S- 0 0 48 -2,-0.3 16,-0.2 1,-0.2 -1,-0.1 0.725 138.2 -35.8 25.2 42.5 -2.4 1.5 -7.8 71 71 A G S S+ 0 0 3 15,-0.2 11,-0.5 14,-0.2 2,-0.4 0.966 96.8 146.6 81.1 63.7 -5.9 1.5 -9.2 72 72 A I B -F 81 0C 26 9,-0.3 -4,-3.1 13,-0.1 2,-1.7 -0.896 40.0-149.6-133.2 103.2 -5.6 2.8 -12.8 73 73 A e E +E 67 0B 1 7,-1.1 2,-0.3 -2,-0.4 -6,-0.3 -0.526 43.7 157.1 -72.1 88.8 -8.0 1.4 -15.4 74 74 A g E +E 66 0B 4 -8,-2.8 -8,-2.4 -2,-1.7 5,-0.2 -0.880 23.2 167.6-123.2 154.8 -5.6 1.7 -18.3 75 75 A S - 0 0 29 3,-1.3 -10,-0.1 -2,-0.3 -53,-0.1 -0.472 61.3 -68.6-135.1-151.8 -5.1 0.2 -21.7 76 76 A P S S+ 0 0 82 0, 0.0 3,-0.1 0, 0.0 -11,-0.1 0.717 127.7 59.0 -83.2 -17.8 -2.9 1.1 -24.8 77 77 A D S S- 0 0 161 1,-0.3 2,-0.3 -13,-0.2 -12,-0.1 0.955 121.3 -43.2 -74.1 -53.4 -4.9 4.2 -25.4 78 78 A G - 0 0 34 -14,-0.3 -3,-1.3 -5,-0.1 2,-0.3 -0.978 47.9-116.7-172.7 164.0 -4.4 5.9 -22.0 79 79 A g + 0 0 37 -2,-0.3 2,-0.3 -5,-0.2 -5,-0.2 -0.828 27.4 171.5-112.7 148.5 -4.3 5.6 -18.3 80 80 A E - 0 0 92 -2,-0.3 -7,-1.1 -7,-0.1 2,-0.7 -0.920 44.6-100.9-158.4 130.1 -6.5 7.1 -15.7 81 81 A E B -F 72 0C 99 -2,-0.3 -9,-0.3 -9,-0.2 -10,-0.1 -0.307 43.2-154.6 -52.8 99.4 -6.9 6.7 -11.9 82 82 A D >> - 0 0 0 -2,-0.7 3,-1.4 -11,-0.5 4,-0.9 -0.708 13.0-147.7 -84.4 114.7 -10.0 4.5 -11.9 83 83 A P T 34 S+ 0 0 58 0, 0.0 7,-0.9 0, 0.0 9,-0.3 0.541 92.9 77.5 -56.9 -2.9 -12.0 4.8 -8.6 84 84 A A T 34 S+ 0 0 65 5,-0.2 -12,-0.1 1,-0.1 -13,-0.1 0.158 104.5 26.8 -92.5 17.7 -12.9 1.2 -9.2 85 85 A f T <4 S- 0 0 13 -3,-1.4 -14,-0.2 -14,-0.2 -13,-0.1 0.556 122.1 -53.2-145.4 -47.2 -9.4 -0.0 -8.0 86 86 A D S < S+ 0 0 98 -4,-0.9 -15,-0.2 -15,-0.4 -16,-0.1 0.491 105.2 50.6-174.8 -28.4 -7.4 2.1 -5.5 87 87 A P S S+ 0 0 53 0, 0.0 -16,-0.1 0, 0.0 -15,-0.1 0.865 121.8 17.2 -93.3 -81.2 -6.5 5.9 -6.0 88 88 A E S S+ 0 0 118 -17,-0.4 -17,-0.1 0, 0.0 -16,-0.0 0.321 109.1 122.1 -71.9 8.2 -9.5 8.0 -6.9 89 89 A A - 0 0 20 -7,-0.2 -5,-0.2 1,-0.1 -8,-0.0 -0.225 60.4-144.2 -68.1 165.4 -11.4 5.0 -5.5 90 90 A A S S- 0 0 103 -7,-0.9 -1,-0.1 -2,-0.0 -6,-0.1 0.884 88.6 -17.5 -88.7 -84.9 -13.9 5.0 -2.7 91 91 A F 0 0 214 -8,-0.2 -7,-0.1 0, 0.0 -2,-0.0 -0.066 360.0 360.0-114.0 30.4 -13.5 1.7 -0.8 92 92 A S 0 0 77 -9,-0.3 -7,-0.2 -5,-0.1 -3,-0.1 -0.635 360.0 360.0-101.3 360.0 -11.6 -0.0 -3.6