==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=28-AUG-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE/RNA 06-APR-11 2LBS . COMPND 2 MOLECULE: RNA (32-MER); . SOURCE 2 SYNTHETIC: YES; . AUTHOR Z.WANG,E.HARTMAN,K.ROY,G.CHANFREAU,J.FEIGON . 90 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6462.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 68 75.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 16 17.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 11.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 31 34.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 4.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 364 B G 0 0 98 0, 0.0 3,-0.1 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0-124.2 -2.2 3.9 14.3 2 365 B S + 0 0 114 1,-0.2 2,-0.3 64,-0.1 61,-0.1 0.903 360.0 127.4 37.9 64.7 -0.9 1.1 12.1 3 366 B L > - 0 0 84 1,-0.2 4,-1.8 59,-0.1 -1,-0.2 -0.995 64.9-129.0-148.3 150.0 -3.5 1.6 9.4 4 367 B D H >> S+ 0 0 80 -2,-0.3 4,-2.0 2,-0.2 3,-1.1 0.996 106.0 51.9 -59.7 -70.5 -3.6 2.2 5.7 5 368 B M H 3> S+ 0 0 108 1,-0.3 4,-2.0 2,-0.2 5,-0.2 0.840 112.5 48.3 -32.4 -54.6 -5.8 5.3 5.5 6 369 B N H 3> S+ 0 0 68 2,-0.2 4,-1.9 1,-0.2 -1,-0.3 0.888 115.4 44.4 -58.6 -42.8 -3.5 6.9 8.0 7 370 B A H S+ 0 0 96 -4,-2.0 4,-1.8 1,-0.3 5,-1.2 0.851 113.6 51.6 -46.2 -37.7 -1.5 6.8 2.6 9 372 B R H X>S+ 0 0 118 -4,-2.0 5,-2.4 -5,-0.5 4,-0.5 0.927 112.6 44.3 -66.0 -46.2 -2.6 10.1 4.0 10 373 B Q H <>S+ 0 0 28 -4,-1.9 5,-1.5 -3,-0.4 -2,-0.2 0.967 122.9 34.1 -63.2 -56.3 0.7 10.8 5.6 11 374 B L H X5S+ 0 0 4 -4,-2.7 4,-0.6 3,-0.2 -3,-0.2 0.975 133.4 26.4 -66.6 -58.1 2.9 9.8 2.7 12 375 B Y H <5S+ 0 0 157 -4,-1.8 -3,-0.2 -5,-0.3 -2,-0.1 0.935 134.4 33.2 -74.0 -48.2 0.8 10.9 -0.2 13 376 B S T <> -AB 22 47A 6 4,-0.7 3,-4.4 -21,-0.3 4,-1.2 -0.933 33.8 -97.8-128.5 151.1 12.5 8.8 -3.1 44 407 B G T 34 S+ 0 0 34 -23,-1.8 -22,-0.1 -2,-0.3 -1,-0.1 0.778 121.8 59.1 -27.4 -57.0 13.7 10.3 -6.4 45 408 B D T 34 S- 0 0 133 1,-0.1 -1,-0.3 2,-0.1 -23,-0.1 0.499 127.8 -99.1 -59.3 -1.6 17.1 11.3 -4.9 46 409 B G T <4 S+ 0 0 46 -3,-4.4 2,-0.5 1,-0.2 -2,-0.2 0.930 72.8 148.9 82.5 49.9 17.6 7.6 -4.1 47 410 B T E < -B 43 0A 45 -4,-1.2 -4,-0.7 0, 0.0 2,-0.5 -0.955 28.3-163.5-122.3 115.1 16.6 7.6 -0.5 48 411 B V E +B 42 0A 64 -2,-0.5 -6,-0.3 -6,-0.3 3,-0.1 -0.849 31.1 138.9-100.7 125.0 14.9 4.5 1.0 49 412 B L E + 0 0 55 -8,-2.9 2,-1.1 -2,-0.5 -7,-0.2 0.599 56.4 68.0-128.6 -42.0 13.1 4.8 4.3 50 413 B G E +B 41 0A 0 -9,-1.7 -9,-2.1 17,-0.1 2,-0.7 -0.697 53.8 162.4 -93.1 92.1 9.9 2.8 4.2 51 414 B T E +B 40 0A 53 -2,-1.1 2,-0.7 -11,-0.2 -11,-0.2 -0.871 10.0 179.1-110.9 101.5 10.8 -0.9 4.0 52 415 B G E +B 39 0A 0 -13,-1.6 -13,-0.7 -2,-0.7 2,-0.7 -0.886 4.9 178.4-108.4 111.9 7.8 -3.0 4.9 53 416 B V E +B 38 0A 58 -2,-0.7 -15,-0.3 -15,-0.3 2,-0.1 -0.899 18.0 156.6-113.2 102.7 8.3 -6.8 4.8 54 417 B G E -B 37 0A 13 -17,-2.3 -17,-1.7 -2,-0.7 3,-0.0 -0.278 53.7 -98.0-109.6-163.2 5.2 -8.7 5.8 55 418 B R S S+ 0 0 172 -19,-0.2 2,-0.2 -2,-0.1 -17,-0.1 0.852 102.0 22.0 -87.4 -39.3 3.6 -12.1 5.3 56 419 B N S > S- 0 0 60 -19,-0.1 4,-0.9 -21,-0.1 -2,-0.3 -0.517 91.5 -94.2-117.5-174.4 1.3 -11.2 2.5 57 420 B I H > S+ 0 0 97 -2,-0.2 4,-2.3 2,-0.2 5,-0.1 0.905 117.2 50.6 -69.5 -44.6 1.0 -8.5 -0.1 58 421 B K H >>S+ 0 0 128 2,-0.2 4,-2.6 1,-0.2 5,-0.5 0.984 107.4 48.9 -60.4 -63.5 -1.3 -6.2 1.9 59 422 B I H >5S+ 0 0 52 1,-0.3 4,-2.4 2,-0.2 -1,-0.2 0.844 111.2 56.3 -48.7 -28.9 0.6 -6.1 5.2 60 423 B A H X5S+ 0 0 1 -4,-0.9 4,-3.0 2,-0.2 5,-0.3 0.968 109.6 42.6 -65.3 -52.0 3.5 -5.3 2.9 61 424 B G H X5S+ 0 0 34 -4,-2.3 4,-1.9 -3,-0.2 -2,-0.2 0.958 123.7 36.6 -56.0 -55.7 1.8 -2.3 1.4 62 425 B I H X5S+ 0 0 40 -4,-2.6 4,-2.1 1,-0.2 -1,-0.2 0.764 116.6 55.5 -69.7 -27.2 0.5 -1.1 4.7 63 426 B R H X< S+ 0 0 28 -4,-2.6 3,-0.8 1,-0.2 -1,-0.2 0.930 110.7 38.8 -52.3 -49.3 7.5 2.1 8.4 68 431 B A H >< S+ 0 0 4 -4,-1.9 3,-4.0 1,-0.2 7,-0.2 0.939 106.5 64.5 -66.6 -47.5 7.9 5.6 6.9 69 432 B L H >< S+ 0 0 49 -4,-2.7 3,-0.7 1,-0.3 -1,-0.2 0.675 90.0 70.3 -50.5 -16.7 5.1 7.0 9.0 70 433 B R T << S+ 0 0 188 -4,-0.9 -1,-0.3 -3,-0.8 3,-0.2 0.667 89.8 62.4 -75.7 -15.9 7.4 6.2 11.9 71 434 B D T X> + 0 0 66 -3,-4.0 3,-2.3 1,-0.2 4,-2.3 -0.271 61.2 150.1-103.1 44.7 9.7 9.0 10.8 72 435 B K H <> S+ 0 0 127 -3,-0.7 4,-3.0 1,-0.3 5,-0.3 0.903 73.4 56.0 -41.1 -54.4 7.1 11.8 11.3 73 436 B K H 3> S+ 0 0 149 -3,-0.2 4,-1.8 1,-0.2 -1,-0.3 0.820 111.0 47.5 -49.9 -30.0 9.9 14.2 12.0 74 437 B M H <> S+ 0 0 30 -3,-2.3 4,-2.9 2,-0.2 -2,-0.3 0.942 107.8 52.2 -76.3 -50.9 11.2 13.1 8.6 75 438 B L H X S+ 0 0 4 -4,-2.3 4,-2.7 -7,-0.2 -2,-0.2 0.922 113.4 45.7 -51.4 -47.8 7.9 13.5 6.8 76 439 B D H X S+ 0 0 103 -4,-3.0 4,-3.0 2,-0.2 5,-0.4 0.967 109.0 54.3 -60.0 -53.3 7.5 17.0 8.1 77 440 B F H X S+ 0 0 110 -4,-1.8 4,-1.3 -5,-0.3 -1,-0.2 0.894 112.3 45.7 -47.1 -42.7 11.1 17.8 7.2 78 441 B Y H X S+ 0 0 26 -4,-2.9 4,-3.5 2,-0.2 5,-0.3 0.913 109.0 55.9 -66.5 -43.3 10.2 16.7 3.7 79 442 B A H X S+ 0 0 21 -4,-2.7 4,-1.6 1,-0.3 -2,-0.2 0.961 109.9 43.7 -53.4 -55.8 7.0 18.7 3.8 80 443 B K H X S+ 0 0 125 -4,-3.0 4,-3.5 1,-0.2 -1,-0.3 0.807 114.1 55.6 -59.8 -27.6 8.9 21.9 4.6 81 444 B Q H X S+ 0 0 55 -4,-1.3 4,-2.6 -5,-0.4 -2,-0.2 0.973 104.0 48.9 -67.5 -57.7 11.3 20.7 1.9 82 445 B R H < S+ 0 0 115 -4,-3.5 -1,-0.2 1,-0.2 -2,-0.2 0.780 120.9 40.2 -54.6 -27.2 8.7 20.3 -0.8 83 446 B A H < S+ 0 0 74 -4,-1.6 -2,-0.2 -5,-0.3 -1,-0.2 0.898 110.5 54.7 -87.1 -48.4 7.5 23.8 0.1 84 447 B A H < S+ 0 0 72 -4,-3.5 -2,-0.2 -5,-0.2 -3,-0.2 0.827 81.0 119.3 -54.6 -34.7 10.9 25.4 0.7 85 448 B I S < S- 0 0 36 -4,-2.6 -3,-0.0 1,-0.2 -66,-0.0 0.034 70.1-133.3 -35.6 135.0 11.9 24.3 -2.8 86 449 B P - 0 0 112 0, 0.0 -1,-0.2 0, 0.0 3,-0.1 0.301 42.0-111.7 -78.6 10.3 12.8 27.4 -5.0 87 450 B R S S+ 0 0 220 1,-0.2 2,-0.3 -4,-0.0 -2,-0.0 0.966 85.0 81.5 57.3 57.3 10.6 25.9 -7.8 88 451 B S - 0 0 78 1,-0.1 -1,-0.2 2,-0.0 0, 0.0 -0.975 63.2-141.7-172.1 174.6 13.5 25.2 -10.1 89 452 B E 0 0 199 -2,-0.3 -1,-0.1 -3,-0.1 -2,-0.0 0.710 360.0 360.0-113.8 -74.3 16.4 22.9 -11.0 90 453 B S 0 0 176 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 0.922 360.0 360.0 -93.6 360.0 19.6 24.6 -12.1