==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 04-APR-02 1LC1 . COMPND 2 MOLECULE: CYTOCHROME C; . SOURCE 2 ORGANISM_SCIENTIFIC: EQUUS CABALLUS; . AUTHOR S.G.SIVAKOLUNDU,P.A.MABROUK . 104 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6147.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 66 63.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 9.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 13 12.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 36 34.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 52 0, 0.0 2,-0.3 0, 0.0 89,-0.1 0.000 360.0 360.0 360.0 -78.1 1.6 2.4 0.7 2 2 A D > - 0 0 79 87,-0.2 4,-0.8 1,-0.1 95,-0.4 -0.865 360.0-124.7-138.0 159.0 -1.2 1.7 3.2 3 3 A V H >> S+ 0 0 23 -2,-0.3 4,-2.4 93,-0.2 3,-0.9 0.954 112.1 53.1 -64.1 -52.8 -3.8 -0.9 4.5 4 4 A E H 3> S+ 0 0 107 1,-0.3 4,-2.7 2,-0.2 5,-0.3 0.907 106.3 51.2 -50.8 -55.2 -6.8 1.6 3.9 5 5 A K H 3> S+ 0 0 91 1,-0.2 4,-1.4 2,-0.2 -1,-0.3 0.764 112.5 49.8 -52.8 -29.3 -5.8 2.1 0.2 6 6 A G H X S+ 0 0 19 -4,-1.4 4,-2.5 -5,-0.3 3,-0.6 0.871 113.8 54.3 -75.2 -31.8 -9.3 -0.7 -3.9 10 10 A F H 3X>S+ 0 0 5 -4,-2.7 4,-2.8 1,-0.2 5,-2.6 0.960 105.4 52.9 -58.3 -49.9 -10.0 -4.4 -3.1 11 11 A V H 3<5S+ 0 0 61 -4,-2.9 -1,-0.2 3,-0.2 -2,-0.2 0.702 114.7 44.9 -62.2 -14.4 -13.6 -3.5 -2.4 12 12 A Q H <<5S+ 0 0 135 -3,-0.6 -2,-0.2 -4,-0.5 -1,-0.2 0.889 131.2 13.2 -92.6 -50.8 -13.7 -1.9 -5.9 13 13 A K H <5S+ 0 0 39 -4,-2.5 -3,-0.2 2,-0.1 -2,-0.2 0.523 135.8 32.4-106.8 -11.9 -11.9 -4.4 -8.2 14 14 A C T >X5S+ 0 0 14 -4,-2.8 4,-3.2 -5,-0.4 3,-2.5 0.767 105.5 60.0-121.5 -48.3 -11.7 -7.6 -6.1 15 15 A A T 34 + 0 0 39 -2,-2.7 4,-0.7 4,-0.3 -1,-0.2 0.813 56.1 71.0 -75.5 -37.0 -14.4 -11.8 1.6 21 21 A E T 4 S+ 0 0 71 -3,-0.5 2,-0.3 1,-0.2 -1,-0.1 0.665 110.5 18.7 -70.6 -19.8 -14.5 -8.2 3.1 22 22 A K T 4 S- 0 0 137 -3,-0.2 -1,-0.2 -7,-0.1 3,-0.1 -0.948 137.0 -2.0-152.7 124.0 -18.3 -8.4 4.2 23 23 A G T 4 S- 0 0 67 -2,-0.3 -2,-0.1 1,-0.1 -4,-0.1 0.839 98.7-110.6 62.0 37.2 -20.4 -11.5 4.6 24 24 A G < + 0 0 49 -4,-0.7 -4,-0.3 1,-0.1 2,-0.2 0.473 64.6 137.8 -4.9 106.9 -17.4 -13.8 3.5 25 25 A K - 0 0 125 -6,-1.9 2,-0.3 -3,-0.1 -1,-0.1 -0.838 48.1-128.0-160.3 174.0 -18.4 -15.3 0.1 26 26 A H + 0 0 56 -2,-0.2 -8,-0.2 -8,-0.2 5,-0.1 -0.919 24.8 164.5-151.9 101.8 -17.1 -16.1 -3.4 27 27 A K S S- 0 0 140 -10,-2.3 -9,-0.2 -2,-0.3 -1,-0.1 0.785 90.5 -16.0 -95.5 -38.4 -19.0 -15.0 -6.5 28 28 A T S S+ 0 0 99 -11,-2.1 -10,-0.2 1,-0.5 -11,-0.1 0.281 138.8 34.9-154.0 3.9 -16.3 -15.6 -9.2 29 29 A G S S- 0 0 6 -12,-1.8 -1,-0.5 -14,-0.1 -10,-0.3 -0.945 94.2 -91.0-143.9 163.5 -13.1 -16.0 -7.1 30 30 A P - 0 0 29 0, 0.0 2,-0.3 0, 0.0 -10,-0.2 -0.225 43.6 -95.1 -68.0 160.0 -12.7 -17.6 -3.6 31 31 A N - 0 0 22 -12,-0.1 2,-2.7 1,-0.1 -5,-0.1 -0.599 42.7-114.0 -64.6 132.3 -13.0 -15.7 -0.2 32 32 A L > - 0 0 25 -2,-0.3 2,-0.9 -14,-0.2 3,-0.8 -0.319 41.5-164.4 -74.3 62.8 -9.3 -14.8 0.8 33 33 A H T 3 - 0 0 45 -2,-2.7 69,-0.1 1,-0.3 -1,-0.1 -0.353 61.5 -48.6 -54.6 89.4 -9.5 -17.2 3.8 34 34 A G T 3 S+ 0 0 23 -2,-0.9 4,-0.3 67,-0.3 -1,-0.3 0.801 82.9 173.9 57.2 36.8 -6.6 -16.2 6.1 35 35 A L X + 0 0 16 -3,-0.8 3,-2.2 2,-0.1 2,-0.7 0.762 40.3 92.9 -59.2 -44.8 -4.2 -16.3 3.1 36 36 A F T 3 S+ 0 0 26 62,-0.5 24,-0.2 1,-0.3 3,-0.1 -0.381 108.1 5.6 -67.2 103.2 -0.8 -15.0 4.3 37 37 A G T 3 S+ 0 0 58 22,-3.4 -1,-0.3 -2,-0.7 23,-0.1 -0.001 112.7 105.3 112.1 -19.9 1.1 -18.2 5.2 38 38 A R < - 0 0 76 -3,-2.2 21,-2.6 -4,-0.3 -1,-0.4 -0.337 66.5-109.7 -87.3 167.8 -1.6 -20.7 4.0 39 39 A K - 0 0 110 19,-0.2 2,-0.1 1,-0.1 -1,-0.1 -0.450 24.3-114.7 -84.4 161.6 -2.0 -23.0 1.0 40 40 A T S S+ 0 0 13 13,-0.2 -1,-0.1 12,-0.1 13,-0.0 -0.370 88.6 70.2 -77.5 171.3 -4.2 -22.8 -2.1 41 41 A G S S+ 0 0 34 -2,-0.1 -1,-0.1 0, 0.0 -2,-0.1 0.923 71.8 108.3 81.6 46.8 -6.9 -25.6 -2.6 42 42 A Q + 0 0 68 -3,-0.0 -2,-0.1 2,-0.0 -3,-0.0 0.424 30.2 123.4-139.2 -5.9 -9.0 -24.4 0.4 43 43 A A - 0 0 17 3,-0.2 2,-2.4 1,-0.1 5,-0.1 -0.432 69.0-112.9 -72.0 142.8 -12.3 -22.7 -0.8 44 44 A P S S- 0 0 95 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 -0.348 87.5 -41.6 -79.6 65.7 -15.6 -24.2 0.6 45 45 A G S S+ 0 0 57 -2,-2.4 2,-0.9 1,-0.3 -2,-0.1 0.255 89.1 145.4 99.1 -6.0 -16.9 -25.6 -2.8 46 46 A F - 0 0 45 1,-0.1 2,-1.8 -17,-0.0 -1,-0.3 -0.468 46.9-143.6 -63.7 98.0 -16.0 -22.7 -5.1 47 47 A T + 0 0 133 -2,-0.9 -1,-0.1 -3,-0.1 3,-0.1 -0.510 35.4 160.0 -85.3 80.2 -15.2 -24.9 -8.0 48 48 A Y - 0 0 61 -2,-1.8 30,-0.1 1,-0.2 -19,-0.0 -0.179 47.9 -59.3 -83.4 178.8 -12.3 -23.2 -9.8 49 49 A T > - 0 0 48 28,-0.2 4,-0.6 1,-0.1 3,-0.3 -0.210 43.6-124.3 -65.9 155.1 -9.7 -24.7 -12.3 50 50 A D H > S+ 0 0 95 1,-0.2 4,-2.1 2,-0.1 5,-0.2 0.900 97.4 66.5 -67.7 -42.3 -7.5 -27.7 -11.2 51 51 A A H > S+ 0 0 30 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.761 93.2 57.3 -61.7 -36.0 -4.0 -26.2 -11.9 52 52 A N H > S+ 0 0 20 -3,-0.3 4,-0.8 25,-0.2 3,-0.4 0.984 114.5 35.9 -56.2 -66.2 -4.0 -23.4 -9.2 53 53 A K H >< S+ 0 0 53 -4,-0.6 3,-1.3 1,-0.2 -2,-0.2 0.894 116.1 56.4 -53.1 -46.5 -4.6 -25.7 -6.2 54 54 A N H 3< S+ 0 0 117 -4,-2.1 -1,-0.2 1,-0.3 -2,-0.2 0.853 100.5 57.6 -59.1 -38.8 -2.5 -28.5 -7.8 55 55 A K H 3< S- 0 0 116 -4,-2.3 -1,-0.3 -3,-0.4 -2,-0.2 0.684 85.9-164.1 -69.0 -20.1 0.5 -26.0 -8.1 56 56 A G << + 0 0 33 -3,-1.3 2,-0.2 -4,-0.8 -3,-0.1 0.477 21.0 165.4 62.2 11.1 0.3 -25.5 -4.2 57 57 A I - 0 0 36 -5,-0.4 -1,-0.1 1,-0.1 6,-0.1 0.366 42.3-121.8 -54.4 -4.2 2.6 -22.3 -4.3 58 58 A T - 0 0 61 -2,-0.2 2,-0.4 1,-0.1 -19,-0.2 0.848 23.8-105.6 56.7 117.7 1.7 -21.1 -0.7 59 59 A W + 0 0 16 -21,-2.6 -22,-3.4 -24,-0.2 2,-0.2 -0.564 62.9 120.2 -76.1 124.0 0.2 -17.6 -0.3 60 60 A K S > S- 0 0 71 -2,-0.4 4,-2.9 -24,-0.2 5,-0.4 -0.914 76.3 -70.6-164.2 178.6 2.5 -14.8 1.0 61 61 A E H > S+ 0 0 60 -2,-0.2 4,-1.9 1,-0.2 5,-0.1 0.894 128.8 44.3 -48.2 -54.8 3.8 -11.3 -0.1 62 62 A E H > S+ 0 0 112 2,-0.2 4,-2.7 1,-0.2 -1,-0.2 0.921 117.6 43.1 -54.9 -53.0 6.2 -12.8 -2.8 63 63 A T H > S+ 0 0 6 1,-0.2 4,-2.4 2,-0.2 -2,-0.2 0.881 116.6 45.8 -74.0 -36.7 3.7 -15.3 -4.3 64 64 A L H X S+ 0 0 7 -4,-2.9 4,-2.2 2,-0.2 -1,-0.2 0.753 112.1 54.5 -75.7 -24.3 0.7 -12.9 -4.3 65 65 A M H X S+ 0 0 83 -4,-1.9 4,-1.8 -5,-0.4 -2,-0.2 0.980 114.7 38.3 -63.0 -57.3 3.1 -10.2 -5.7 66 66 A E H X S+ 0 0 79 -4,-2.7 4,-1.0 2,-0.2 8,-0.3 0.881 120.6 49.1 -64.7 -37.9 4.0 -12.5 -8.6 67 67 A Y H >< S+ 0 0 23 -4,-2.4 3,-1.2 -5,-0.2 -3,-0.2 0.990 112.7 41.2 -65.1 -64.6 0.5 -13.8 -8.9 68 68 A L H 3< S+ 0 0 17 -4,-2.2 17,-0.2 1,-0.3 -1,-0.2 0.729 120.0 46.5 -68.0 -18.7 -1.6 -10.5 -8.9 69 69 A E H 3< S+ 0 0 55 -4,-1.8 -1,-0.3 -5,-0.2 -2,-0.2 0.730 139.9 2.1 -76.9 -26.7 0.9 -8.9 -11.3 70 70 A N S XX S+ 0 0 72 -3,-1.2 4,-2.8 -4,-1.0 3,-0.7 -0.318 74.6 165.9-163.2 56.2 1.1 -11.9 -13.6 71 71 A P H 3> S+ 0 0 3 0, 0.0 4,-3.1 0, 0.0 7,-0.1 0.889 75.3 44.5 -68.5 -51.4 -1.2 -14.7 -12.6 72 72 A K H 34 S+ 0 0 96 1,-0.2 5,-0.2 2,-0.2 6,-0.1 0.633 117.8 48.3 -69.1 -18.4 -1.4 -17.1 -15.6 73 73 A K H <4 S+ 0 0 132 -3,-0.7 -1,-0.2 -6,-0.2 -6,-0.1 0.892 113.6 46.1 -75.6 -52.9 2.4 -16.8 -15.9 74 74 A Y H < S+ 0 0 67 -4,-2.8 -2,-0.2 -8,-0.3 -7,-0.1 0.897 134.5 9.4 -61.8 -44.8 3.0 -17.5 -12.2 75 75 A I S >< S- 0 0 0 -4,-3.1 3,-0.9 -5,-0.2 -1,-0.3 -0.983 85.1-129.6-134.8 123.4 0.6 -20.5 -12.1 76 76 A P T 3 S+ 0 0 74 0, 0.0 -21,-0.2 0, 0.0 3,-0.1 -0.234 86.2 30.5 -66.8 160.3 -0.9 -21.9 -15.3 77 77 A G T 3 S+ 0 0 44 1,-0.2 2,-0.4 -5,-0.2 -25,-0.2 0.468 74.4 150.6 69.9 3.9 -4.7 -22.5 -15.7 78 78 A T < - 0 0 9 -3,-0.9 -1,-0.2 1,-0.1 -6,-0.1 -0.561 34.1-159.0 -62.0 120.1 -5.7 -19.6 -13.4 79 79 A K + 0 0 146 -2,-0.4 2,-1.1 -3,-0.1 -1,-0.1 0.169 39.1 143.2 -87.5 16.7 -9.2 -18.4 -14.7 80 80 A M > - 0 0 32 1,-0.1 2,-2.3 2,-0.0 3,-1.0 -0.440 40.2-156.1 -64.1 94.6 -8.8 -14.9 -13.1 81 81 A I T 3 S+ 0 0 139 -2,-1.1 -1,-0.1 1,-0.2 -2,-0.1 -0.453 81.9 56.7 -73.4 69.5 -10.4 -12.6 -15.7 82 82 A F T 3 - 0 0 87 -2,-2.3 2,-1.9 0, 0.0 -1,-0.2 0.280 66.2-175.3-163.4 -38.0 -8.5 -9.5 -14.6 83 83 A A < + 0 0 46 -3,-1.0 2,-0.3 2,-0.0 -2,-0.1 0.028 65.3 20.6 46.9 -17.7 -4.7 -10.3 -14.8 84 84 A G - 0 0 30 -2,-1.9 -15,-0.1 1,-0.1 -16,-0.0 -0.952 60.4-137.9-173.4 157.4 -3.5 -6.9 -13.2 85 85 A I - 0 0 7 -2,-0.3 2,-0.2 -17,-0.2 -1,-0.1 0.941 40.2-117.4 -90.3 -57.0 -4.6 -3.9 -11.1 86 86 A K S S+ 0 0 179 1,-0.1 2,-0.3 0, 0.0 -1,-0.1 -0.763 85.1 48.7 160.9 -84.1 -3.2 -0.6 -12.6 87 87 A K S >> S- 0 0 113 -2,-0.2 4,-1.6 1,-0.1 3,-0.6 -0.637 72.6-133.8 -77.1 133.0 -0.8 1.4 -10.3 88 88 A K H 3> S+ 0 0 148 -2,-0.3 4,-2.0 1,-0.2 -1,-0.1 0.745 108.8 61.9 -60.5 -18.3 2.1 -0.6 -8.7 89 89 A T H 3> S+ 0 0 65 2,-0.2 4,-3.1 1,-0.2 -1,-0.2 0.890 98.8 51.4 -78.2 -31.5 1.1 1.2 -5.5 90 90 A E H <> S+ 0 0 10 -3,-0.6 4,-2.6 2,-0.2 -2,-0.2 0.914 110.1 53.0 -60.3 -37.7 -2.4 -0.4 -5.6 91 91 A R H X S+ 0 0 10 -4,-1.6 4,-1.3 2,-0.2 -2,-0.2 0.917 111.5 43.5 -60.0 -48.3 -0.3 -3.6 -5.9 92 92 A E H X S+ 0 0 94 -4,-2.0 4,-2.6 2,-0.2 3,-0.4 0.936 112.8 53.0 -54.5 -53.4 1.7 -2.5 -2.7 93 93 A D H X S+ 0 0 8 -4,-3.1 4,-3.2 1,-0.3 -87,-0.4 0.856 104.1 55.4 -61.8 -37.3 -1.5 -1.5 -0.9 94 94 A L H X S+ 0 0 4 -4,-2.6 4,-3.0 2,-0.2 -1,-0.3 0.894 110.2 46.0 -58.3 -44.0 -3.1 -5.0 -1.6 95 95 A I H X S+ 0 0 21 -4,-1.3 4,-2.6 -3,-0.4 -2,-0.2 0.946 113.3 49.8 -63.4 -46.9 -0.0 -6.6 0.0 96 96 A A H X S+ 0 0 30 -4,-2.6 4,-1.1 2,-0.2 -93,-0.2 0.921 116.7 42.3 -56.3 -47.5 -0.3 -4.1 2.9 97 97 A Y H >X S+ 0 0 17 -4,-3.2 4,-2.9 -95,-0.4 3,-0.6 0.958 116.4 45.1 -60.5 -57.2 -4.1 -4.9 3.3 98 98 A L H 3< S+ 0 0 10 -4,-3.0 -62,-0.5 1,-0.3 4,-0.4 0.773 105.7 60.9 -75.0 -20.0 -3.9 -8.7 2.9 99 99 A K H 3< S+ 0 0 81 -4,-2.6 3,-0.3 -5,-0.2 -1,-0.3 0.889 116.6 35.1 -57.7 -43.3 -0.9 -8.9 5.3 100 100 A K H XX S+ 0 0 65 -4,-1.1 3,-2.9 -3,-0.6 4,-2.2 0.910 100.6 77.6 -75.1 -44.0 -3.4 -7.4 7.8 101 101 A A T 3< S+ 0 0 41 -4,-2.9 -67,-0.3 1,-0.3 -1,-0.2 0.490 92.6 52.7 -58.4 -8.7 -6.6 -9.2 6.6 102 102 A T T 34 S+ 0 0 58 -4,-0.4 -1,-0.3 -3,-0.3 -2,-0.1 0.219 130.5 16.4-101.2 9.7 -5.6 -12.6 8.3 103 103 A N T <4 0 0 117 -3,-2.9 -2,-0.2 0, 0.0 -3,-0.1 0.354 360.0 360.0-153.9 -10.1 -5.1 -10.8 11.7 104 104 A E < 0 0 143 -4,-2.2 -3,-0.3 -7,-0.2 -4,-0.1 0.330 360.0 360.0-162.6 360.0 -6.9 -7.3 11.4